Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NEDD4P46934 TNN-203ENST00000622870 3719 ntTSL 5 BASIC16.98■□□□□ 0.31
NEDD4P46934 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC16.98■□□□□ 0.31
NEDD4P46934 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC16.98■□□□□ 0.31
NEDD4P46934 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NEDD4P46934 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NEDD4P46934 STK26-204ENST00000481105 1835 ntTSL 2 BASIC16.97■□□□□ 0.31
NEDD4P46934 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
NEDD4P46934 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NEDD4P46934 NCR3-202ENST00000376071 541 ntTSL 5 BASIC16.97■□□□□ 0.31
NEDD4P46934 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC16.97■□□□□ 0.31
NEDD4P46934 AC073150.1-201ENST00000450406 1084 ntBASIC16.97■□□□□ 0.31
NEDD4P46934 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC16.97■□□□□ 0.31
NEDD4P46934 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC16.97■□□□□ 0.31
NEDD4P46934 AC090857.1-201ENST00000527400 390 ntBASIC16.97■□□□□ 0.31
NEDD4P46934 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC16.97■□□□□ 0.31
NEDD4P46934 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
NEDD4P46934 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC16.97■□□□□ 0.31
NEDD4P46934 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC16.97■□□□□ 0.31
NEDD4P46934 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
NEDD4P46934 AP001505.2-201ENST00000616815 443 ntBASIC16.97■□□□□ 0.31
NEDD4P46934 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC16.97■□□□□ 0.31
NEDD4P46934 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NEDD4P46934 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
NEDD4P46934 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NEDD4P46934 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NEDD4P46934 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NEDD4P46934 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
NEDD4P46934 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NEDD4P46934 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
NEDD4P46934 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
NEDD4P46934 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NEDD4P46934 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NEDD4P46934 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
NEDD4P46934 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
NEDD4P46934 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NEDD4P46934 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC16.97■□□□□ 0.31
NEDD4P46934 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
NEDD4P46934 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NEDD4P46934 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NEDD4P46934 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
NEDD4P46934 GOLGA8VP-201ENST00000559009 1798 ntBASIC16.97■□□□□ 0.31
NEDD4P46934 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NEDD4P46934 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
NEDD4P46934 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
NEDD4P46934 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC16.97■□□□□ 0.31
NEDD4P46934 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NEDD4P46934 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NEDD4P46934 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NEDD4P46934 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NEDD4P46934 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NEDD4P46934 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NEDD4P46934 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC16.96■□□□□ 0.31
NEDD4P46934 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC16.96■□□□□ 0.31
NEDD4P46934 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC16.96■□□□□ 0.31
NEDD4P46934 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC16.96■□□□□ 0.31
NEDD4P46934 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC16.96■□□□□ 0.31
NEDD4P46934 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC16.96■□□□□ 0.31
NEDD4P46934 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC16.96■□□□□ 0.31
NEDD4P46934 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NEDD4P46934 AC024681.1-201ENST00000521917 487 ntBASIC16.96■□□□□ 0.31
NEDD4P46934 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NEDD4P46934 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC16.96■□□□□ 0.31
NEDD4P46934 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC16.96■□□□□ 0.31
NEDD4P46934 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.96■□□□□ 0.31
NEDD4P46934 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NEDD4P46934 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
NEDD4P46934 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NEDD4P46934 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NEDD4P46934 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
NEDD4P46934 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NEDD4P46934 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NEDD4P46934 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NEDD4P46934 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
NEDD4P46934 AC015909.3-201ENST00000572855 1794 ntBASIC16.96■□□□□ 0.31
NEDD4P46934 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC16.96■□□□□ 0.31
NEDD4P46934 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NEDD4P46934 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NEDD4P46934 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NEDD4P46934 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NEDD4P46934 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
NEDD4P46934 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
NEDD4P46934 AC011474.4-201ENST00000623523 2076 ntBASIC16.96■□□□□ 0.31
NEDD4P46934 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NEDD4P46934 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
NEDD4P46934 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
NEDD4P46934 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC16.96■□□□□ 0.3
NEDD4P46934 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
NEDD4P46934 AC239868.1-201ENST00000369385 493 ntBASIC16.96■□□□□ 0.3
NEDD4P46934 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.3
NEDD4P46934 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC16.96■□□□□ 0.3
NEDD4P46934 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
NEDD4P46934 RPS9P1-201ENST00000419943 583 ntBASIC16.96■□□□□ 0.3
NEDD4P46934 AC093752.3-201ENST00000567343 901 ntBASIC16.96■□□□□ 0.3
NEDD4P46934 RN7SL574P-201ENST00000581512 297 ntBASIC16.96■□□□□ 0.3
NEDD4P46934 MIR3188-201ENST00000583494 85 ntBASIC16.96■□□□□ 0.3
NEDD4P46934 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC16.96■□□□□ 0.3
NEDD4P46934 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC16.96■□□□□ 0.3
NEDD4P46934 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC16.96■□□□□ 0.3
NEDD4P46934 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.96■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms