Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPCS1Q9Y6A9 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SPCS1Q9Y6A9 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
SPCS1Q9Y6A9 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC15.66■□□□□ 0.1
SPCS1Q9Y6A9 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPCS1Q9Y6A9 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPCS1Q9Y6A9 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SPCS1Q9Y6A9 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
SPCS1Q9Y6A9 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPCS1Q9Y6A9 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPCS1Q9Y6A9 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPCS1Q9Y6A9 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SPCS1Q9Y6A9 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPCS1Q9Y6A9 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPCS1Q9Y6A9 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPCS1Q9Y6A9 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SPCS1Q9Y6A9 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC15.65■□□□□ 0.1
SPCS1Q9Y6A9 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SPCS1Q9Y6A9 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SPCS1Q9Y6A9 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPCS1Q9Y6A9 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPCS1Q9Y6A9 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPCS1Q9Y6A9 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SPCS1Q9Y6A9 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPCS1Q9Y6A9 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPCS1Q9Y6A9 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC15.65■□□□□ 0.1
SPCS1Q9Y6A9 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPCS1Q9Y6A9 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC15.64■□□□□ 0.09
SPCS1Q9Y6A9 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SPCS1Q9Y6A9 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC15.64■□□□□ 0.09
SPCS1Q9Y6A9 BID-212ENST00000614949 1988 ntTSL 5 BASIC15.64■□□□□ 0.09
SPCS1Q9Y6A9 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPCS1Q9Y6A9 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPCS1Q9Y6A9 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPCS1Q9Y6A9 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC15.64■□□□□ 0.09
SPCS1Q9Y6A9 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC15.64■□□□□ 0.09
SPCS1Q9Y6A9 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SPCS1Q9Y6A9 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPCS1Q9Y6A9 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPCS1Q9Y6A9 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPCS1Q9Y6A9 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC15.63■□□□□ 0.09
SPCS1Q9Y6A9 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SPCS1Q9Y6A9 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SPCS1Q9Y6A9 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SPCS1Q9Y6A9 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SPCS1Q9Y6A9 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SPCS1Q9Y6A9 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SPCS1Q9Y6A9 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SPCS1Q9Y6A9 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SPCS1Q9Y6A9 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SPCS1Q9Y6A9 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SPCS1Q9Y6A9 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
SPCS1Q9Y6A9 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SPCS1Q9Y6A9 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SPCS1Q9Y6A9 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
SPCS1Q9Y6A9 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SPCS1Q9Y6A9 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
SPCS1Q9Y6A9 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SPCS1Q9Y6A9 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SPCS1Q9Y6A9 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SPCS1Q9Y6A9 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SPCS1Q9Y6A9 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SPCS1Q9Y6A9 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SPCS1Q9Y6A9 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
SPCS1Q9Y6A9 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
SPCS1Q9Y6A9 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC15.62■□□□□ 0.09
SPCS1Q9Y6A9 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SPCS1Q9Y6A9 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SPCS1Q9Y6A9 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SPCS1Q9Y6A9 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPCS1Q9Y6A9 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SPCS1Q9Y6A9 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SPCS1Q9Y6A9 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.61■□□□□ 0.09
SPCS1Q9Y6A9 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SPCS1Q9Y6A9 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPCS1Q9Y6A9 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC15.61■□□□□ 0.09
SPCS1Q9Y6A9 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPCS1Q9Y6A9 SHD-204ENST00000599689 1729 ntTSL 5 BASIC15.61■□□□□ 0.09
SPCS1Q9Y6A9 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
SPCS1Q9Y6A9 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPCS1Q9Y6A9 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SPCS1Q9Y6A9 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPCS1Q9Y6A9 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPCS1Q9Y6A9 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPCS1Q9Y6A9 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SPCS1Q9Y6A9 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SPCS1Q9Y6A9 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC15.6■□□□□ 0.09
SPCS1Q9Y6A9 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SPCS1Q9Y6A9 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
SPCS1Q9Y6A9 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
SPCS1Q9Y6A9 EML3-217ENST00000531557 2509 ntTSL 5 BASIC15.6■□□□□ 0.09
SPCS1Q9Y6A9 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SPCS1Q9Y6A9 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
SPCS1Q9Y6A9 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.6■□□□□ 0.09
SPCS1Q9Y6A9 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
SPCS1Q9Y6A9 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC15.6■□□□□ 0.09
SPCS1Q9Y6A9 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SPCS1Q9Y6A9 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SPCS1Q9Y6A9 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC15.59■□□□□ 0.09
SPCS1Q9Y6A9 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms