Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.02■□□□□ 0.95
CTPS2Q9NRF8 AC012676.1-201ENST00000574705 1949 ntBASIC21.02■□□□□ 0.95
CTPS2Q9NRF8 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTPS2Q9NRF8 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTPS2Q9NRF8 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTPS2Q9NRF8 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTPS2Q9NRF8 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CTPS2Q9NRF8 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CTPS2Q9NRF8 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.01■□□□□ 0.95
CTPS2Q9NRF8 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CTPS2Q9NRF8 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTPS2Q9NRF8 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21■□□□□ 0.95
CTPS2Q9NRF8 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21■□□□□ 0.95
CTPS2Q9NRF8 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CTPS2Q9NRF8 MIR4281-201ENST00000580852 62 ntBASIC21■□□□□ 0.95
CTPS2Q9NRF8 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21■□□□□ 0.95
CTPS2Q9NRF8 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21■□□□□ 0.95
CTPS2Q9NRF8 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTPS2Q9NRF8 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTPS2Q9NRF8 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTPS2Q9NRF8 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.99■□□□□ 0.95
CTPS2Q9NRF8 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.99■□□□□ 0.95
CTPS2Q9NRF8 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTPS2Q9NRF8 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CTPS2Q9NRF8 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CTPS2Q9NRF8 AL022069.1-201ENST00000568025 1636 ntBASIC20.99■□□□□ 0.95
CTPS2Q9NRF8 ANOS2P-203ENST00000472227 1816 ntBASIC20.99■□□□□ 0.95
CTPS2Q9NRF8 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTPS2Q9NRF8 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.98■□□□□ 0.95
CTPS2Q9NRF8 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTPS2Q9NRF8 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CTPS2Q9NRF8 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTPS2Q9NRF8 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.98■□□□□ 0.95
CTPS2Q9NRF8 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CTPS2Q9NRF8 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CTPS2Q9NRF8 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CTPS2Q9NRF8 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTPS2Q9NRF8 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTPS2Q9NRF8 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.97■□□□□ 0.95
CTPS2Q9NRF8 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTPS2Q9NRF8 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CTPS2Q9NRF8 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CTPS2Q9NRF8 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTPS2Q9NRF8 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.97■□□□□ 0.95
CTPS2Q9NRF8 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.97■□□□□ 0.95
CTPS2Q9NRF8 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTPS2Q9NRF8 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTPS2Q9NRF8 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.97■□□□□ 0.95
CTPS2Q9NRF8 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.97■□□□□ 0.95
CTPS2Q9NRF8 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.97■□□□□ 0.95
CTPS2Q9NRF8 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTPS2Q9NRF8 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTPS2Q9NRF8 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.97■□□□□ 0.95
CTPS2Q9NRF8 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.97■□□□□ 0.95
CTPS2Q9NRF8 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTPS2Q9NRF8 AC131274.2-201ENST00000580697 1507 ntBASIC20.96■□□□□ 0.95
CTPS2Q9NRF8 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTPS2Q9NRF8 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.96■□□□□ 0.95
CTPS2Q9NRF8 RARRES2P1-201ENST00000474487 481 ntBASIC20.96■□□□□ 0.95
CTPS2Q9NRF8 AL031848.2-201ENST00000607670 837 ntBASIC20.96■□□□□ 0.95
CTPS2Q9NRF8 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTPS2Q9NRF8 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
CTPS2Q9NRF8 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.96■□□□□ 0.95
CTPS2Q9NRF8 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CTPS2Q9NRF8 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CTPS2Q9NRF8 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.95■□□□□ 0.94
CTPS2Q9NRF8 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CTPS2Q9NRF8 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTPS2Q9NRF8 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTPS2Q9NRF8 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CTPS2Q9NRF8 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CTPS2Q9NRF8 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CTPS2Q9NRF8 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTPS2Q9NRF8 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTPS2Q9NRF8 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.94■□□□□ 0.94
CTPS2Q9NRF8 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.94■□□□□ 0.94
CTPS2Q9NRF8 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CTPS2Q9NRF8 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTPS2Q9NRF8 AL161729.1-201ENST00000604104 1402 ntBASIC20.94■□□□□ 0.94
CTPS2Q9NRF8 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTPS2Q9NRF8 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CTPS2Q9NRF8 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTPS2Q9NRF8 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTPS2Q9NRF8 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CTPS2Q9NRF8 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CTPS2Q9NRF8 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTPS2Q9NRF8 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.93■□□□□ 0.94
CTPS2Q9NRF8 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CTPS2Q9NRF8 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CTPS2Q9NRF8 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CTPS2Q9NRF8 AF131216.4-201ENST00000638924 1588 ntBASIC20.93■□□□□ 0.94
CTPS2Q9NRF8 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTPS2Q9NRF8 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTPS2Q9NRF8 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTPS2Q9NRF8 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.92■□□□□ 0.94
CTPS2Q9NRF8 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CTPS2Q9NRF8 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTPS2Q9NRF8 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.92■□□□□ 0.94
CTPS2Q9NRF8 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.92■□□□□ 0.94
CTPS2Q9NRF8 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms