Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ATPAF2Q8N5M1 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
ATPAF2Q8N5M1 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ATPAF2Q8N5M1 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
ATPAF2Q8N5M1 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ATPAF2Q8N5M1 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ATPAF2Q8N5M1 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
ATPAF2Q8N5M1 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.25■■□□□ 1.31
ATPAF2Q8N5M1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.25■■□□□ 1.31
ATPAF2Q8N5M1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.25■■□□□ 1.31
ATPAF2Q8N5M1 UNC93B8-201ENST00000511903 705 ntBASIC23.25■■□□□ 1.31
ATPAF2Q8N5M1 AC005703.6-201ENST00000623265 1329 ntBASIC23.25■■□□□ 1.31
ATPAF2Q8N5M1 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ATPAF2Q8N5M1 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
ATPAF2Q8N5M1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.24■■□□□ 1.31
ATPAF2Q8N5M1 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ATPAF2Q8N5M1 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.24■■□□□ 1.31
ATPAF2Q8N5M1 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.24■■□□□ 1.31
ATPAF2Q8N5M1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.24■■□□□ 1.31
ATPAF2Q8N5M1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.24■■□□□ 1.31
ATPAF2Q8N5M1 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ATPAF2Q8N5M1 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
ATPAF2Q8N5M1 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.24■■□□□ 1.31
ATPAF2Q8N5M1 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ATPAF2Q8N5M1 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ATPAF2Q8N5M1 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ATPAF2Q8N5M1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ATPAF2Q8N5M1 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ATPAF2Q8N5M1 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC23.23■■□□□ 1.31
ATPAF2Q8N5M1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
ATPAF2Q8N5M1 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.23■■□□□ 1.31
ATPAF2Q8N5M1 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.23■■□□□ 1.31
ATPAF2Q8N5M1 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ATPAF2Q8N5M1 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ATPAF2Q8N5M1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.22■■□□□ 1.31
ATPAF2Q8N5M1 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ATPAF2Q8N5M1 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.22■■□□□ 1.31
ATPAF2Q8N5M1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.22■■□□□ 1.31
ATPAF2Q8N5M1 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
ATPAF2Q8N5M1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
ATPAF2Q8N5M1 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.22■■□□□ 1.31
ATPAF2Q8N5M1 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ATPAF2Q8N5M1 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ATPAF2Q8N5M1 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
ATPAF2Q8N5M1 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.21■■□□□ 1.31
ATPAF2Q8N5M1 KRT16P3-201ENST00000439127 1283 ntBASIC23.21■■□□□ 1.31
ATPAF2Q8N5M1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
ATPAF2Q8N5M1 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
ATPAF2Q8N5M1 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ATPAF2Q8N5M1 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
ATPAF2Q8N5M1 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATPAF2Q8N5M1 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
ATPAF2Q8N5M1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATPAF2Q8N5M1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
ATPAF2Q8N5M1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ATPAF2Q8N5M1 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
ATPAF2Q8N5M1 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATPAF2Q8N5M1 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.19■■□□□ 1.3
ATPAF2Q8N5M1 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATPAF2Q8N5M1 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
ATPAF2Q8N5M1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.19■■□□□ 1.3
ATPAF2Q8N5M1 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.19■■□□□ 1.3
ATPAF2Q8N5M1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.19■■□□□ 1.3
ATPAF2Q8N5M1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.19■■□□□ 1.3
ATPAF2Q8N5M1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATPAF2Q8N5M1 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ATPAF2Q8N5M1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATPAF2Q8N5M1 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ATPAF2Q8N5M1 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.19■■□□□ 1.3
ATPAF2Q8N5M1 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATPAF2Q8N5M1 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATPAF2Q8N5M1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATPAF2Q8N5M1 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATPAF2Q8N5M1 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.18■■□□□ 1.3
ATPAF2Q8N5M1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
ATPAF2Q8N5M1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATPAF2Q8N5M1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATPAF2Q8N5M1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ATPAF2Q8N5M1 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
ATPAF2Q8N5M1 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.18■■□□□ 1.3
ATPAF2Q8N5M1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ATPAF2Q8N5M1 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATPAF2Q8N5M1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATPAF2Q8N5M1 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
ATPAF2Q8N5M1 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATPAF2Q8N5M1 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.17■■□□□ 1.3
ATPAF2Q8N5M1 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.17■■□□□ 1.3
ATPAF2Q8N5M1 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.17■■□□□ 1.3
ATPAF2Q8N5M1 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
ATPAF2Q8N5M1 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
ATPAF2Q8N5M1 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ATPAF2Q8N5M1 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ATPAF2Q8N5M1 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATPAF2Q8N5M1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.16■■□□□ 1.3
ATPAF2Q8N5M1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
ATPAF2Q8N5M1 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATPAF2Q8N5M1 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
ATPAF2Q8N5M1 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATPAF2Q8N5M1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.16■■□□□ 1.3
ATPAF2Q8N5M1 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms