Protein–RNA interactions for Protein: O15371

EIF3D, Eukaryotic translation initiation factor 3 subunit D, humanhuman

Known RBP eCLIP

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3DO15371 CANT1-207ENST00000588611 900 ntTSL 313.01□□□□□ -0.332e-6■□□□□ 9.5
EIF3DO15371 AKAP1-206ENST00000571629 3105 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.372e-6■□□□□ 9.5
EIF3DO15371 TCEA3-203ENST00000450454 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.382e-6■□□□□ 9.5
EIF3DO15371 AKAP1-210ENST00000572814 532 ntTSL 412.67□□□□□ -0.382e-6■□□□□ 9.5
EIF3DO15371 CANT1-216ENST00000620915 3337 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.52e-6■□□□□ 9.5
EIF3DO15371 AKAP1-219ENST00000621116 4285 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.522e-6■□□□□ 9.5
EIF3DO15371 CANT1-202ENST00000392446 3252 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.532e-6■□□□□ 9.5
EIF3DO15371 SLC35B1-210ENST00000508520 845 ntTSL 511.49□□□□□ -0.572e-6■□□□□ 9.5
EIF3DO15371 SLC35B1-211ENST00000508607 529 ntTSL 211.39□□□□□ -0.592e-6■□□□□ 9.5
EIF3DO15371 MRPL3-207ENST00000510154 532 ntTSL 410.51□□□□□ -0.732e-8■□□□□ 9.5
EIF3DO15371 SLC35B1-218ENST00000514907 633 ntTSL 510.15□□□□□ -0.782e-6■□□□□ 9.5
EIF3DO15371 SLC35B1-215ENST00000511657 548 ntTSL 39.4□□□□□ -0.92e-6■□□□□ 9.5
EIF3DO15371 VAMP3-201ENST00000054666 2205 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.952e-6■□□□□ 9.5
EIF3DO15371 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.982e-6■□□□□ 9.5
EIF3DO15371 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC7.84□□□□□ -1.152e-6■□□□□ 9.5
EIF3DO15371 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC7.34□□□□□ -1.232e-6■□□□□ 9.5
EIF3DO15371 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.232e-6■□□□□ 9.5
EIF3DO15371 AKAP1-216ENST00000575322 650 ntTSL 47.22□□□□□ -1.252e-6■□□□□ 9.5
EIF3DO15371 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.35e-21■□□□□ 9.5
EIF3DO15371 FAM169A-207ENST00000514215 5954 ntTSL 1 (best)6.62□□□□□ -1.352e-6■□□□□ 9.5
EIF3DO15371 NDUFA4-206ENST00000492822 566 ntTSL 56.32□□□□□ -1.45e-21■□□□□ 9.5
EIF3DO15371 NDUFA4-205ENST00000486007 434 ntTSL 25.59□□□□□ -1.515e-21■□□□□ 9.5
EIF3DO15371 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.95□□□□□ -1.622e-6■□□□□ 9.5
EIF3DO15371 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.722e-6■□□□□ 9.5
EIF3DO15371 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.328e-7■□□□□ 9.5
EIF3DO15371 FANCA-230ENST00000568369 4601 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.618e-7■□□□□ 9.5
EIF3DO15371 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.012e-52■□□□□ 9.5
EIF3DO15371 PEG10-207ENST00000613043 574 ntTSL 513.92□□□□□ -0.182e-52■□□□□ 9.5
EIF3DO15371 PEG10-204ENST00000493935 763 ntTSL 413.43□□□□□ -0.262e-52■□□□□ 9.5
EIF3DO15371 PEG10-203ENST00000488574 2587 ntTSL 2 BASIC12.71□□□□□ -0.372e-52■□□□□ 9.5
EIF3DO15371 PEG10-202ENST00000482108 6618 ntTSL 1 (best) BASIC8.92□□□□□ -0.982e-52■□□□□ 9.5
EIF3DO15371 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.27■□□□□ 0.522e-25■□□□□ 9.5
EIF3DO15371 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.262e-6■□□□□ 9.5
EIF3DO15371 YWHAB-207ENST00000631616 5867 ntTSL 1 (best)17.81■□□□□ 0.442e-9■□□□□ 9.5
EIF3DO15371 YWHAB-203ENST00000428262 648 ntTSL 316.48■□□□□ 0.232e-9■□□□□ 9.5
EIF3DO15371 YWHAB-201ENST00000353703 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.162e-9■□□□□ 9.5
EIF3DO15371 YWHAB-202ENST00000372839 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.272e-9■□□□□ 9.5
EIF3DO15371 YWHAB-204ENST00000445830 556 ntTSL 212.73□□□□□ -0.372e-9■□□□□ 9.5
EIF3DO15371 YWHAB-206ENST00000479421 1097 ntTSL 511.84□□□□□ -0.512e-9■□□□□ 9.5
EIF3DO15371 SF3B3-204ENST00000563739 1105 ntTSL 210.88□□□□□ -0.675e-6■□□□□ 9.5
EIF3DO15371 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.15e-6■□□□□ 9.5
EIF3DO15371 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.65e-11■□□□□ 9.4
EIF3DO15371 PKD1-224ENST00000561991 964 ntTSL 519.31■□□□□ 0.682e-7■□□□□ 9.4
EIF3DO15371 FANCA-226ENST00000567879 713 ntAPPRIS ALT2 TSL 314.8□□□□□ -0.043e-7■□□□□ 9.4
EIF3DO15371 FANCA-215ENST00000564475 732 ntAPPRIS ALT2 TSL 212.94□□□□□ -0.343e-7■□□□□ 9.4
EIF3DO15371 FANCA-216ENST00000564870 460 ntTSL 310.81□□□□□ -0.683e-7■□□□□ 9.4
EIF3DO15371 MIR3615-201ENST00000581999 87 ntBASIC15.73■□□□□ 0.111e-14■□□□□ 9.4
EIF3DO15371 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.62□□□□□ -1.359e-8■□□□□ 9.4
EIF3DO15371 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.12□□□□□ -1.439e-8■□□□□ 9.4
EIF3DO15371 DST-208ENST00000439203 9180 ntTSL 1 (best)1.6□□□□□ -2.159e-8■□□□□ 9.4
EIF3DO15371 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.013e-28■□□□□ 9.4
EIF3DO15371 TUBA1B-201ENST00000332858 3198 ntTSL 1 (best)14.61□□□□□ -0.073e-28■□□□□ 9.4
EIF3DO15371 TUBA1B-204ENST00000547765 1875 ntTSL 514.52□□□□□ -0.083e-28■□□□□ 9.4
EIF3DO15371 TUBA1B-208ENST00000552984 574 ntTSL 412.32□□□□□ -0.443e-28■□□□□ 9.4
EIF3DO15371 TUBA1B-203ENST00000547476 584 ntTSL 412.1□□□□□ -0.473e-28■□□□□ 9.4
EIF3DO15371 TUBA1B-207ENST00000551324 840 ntTSL 210.22□□□□□ -0.773e-28■□□□□ 9.4
EIF3DO15371 TUBA1B-206ENST00000550367 835 ntTSL 310.03□□□□□ -0.83e-28■□□□□ 9.4
EIF3DO15371 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.82■■□□□ 1.081e-23■□□□□ 9.4
EIF3DO15371 CFL1-215ENST00000534784 737 ntTSL 319.73■□□□□ 0.751e-23■□□□□ 9.4
EIF3DO15371 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.2■□□□□ 0.51e-23■□□□□ 9.4
EIF3DO15371 CFL1-209ENST00000530413 647 ntTSL 1 (best)16.14■□□□□ 0.171e-23■□□□□ 9.4
EIF3DO15371 CFL1-206ENST00000527344 962 ntTSL 2 BASIC14.61□□□□□ -0.071e-23■□□□□ 9.4
EIF3DO15371 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.499e-9■□□□□ 9.4
EIF3DO15371 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.139e-9■□□□□ 9.4
EIF3DO15371 BMP4-208ENST00000559642 505 ntTSL 313.98□□□□□ -0.179e-9■□□□□ 9.4
EIF3DO15371 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC27.06■■□□□ 1.921e-6■□□□□ 9.4
EIF3DO15371 TTC3-217ENST00000481605 1540 ntTSL 525.27■■□□□ 1.641e-6■□□□□ 9.4
EIF3DO15371 TTC3-210ENST00000450533 2451 ntTSL 1 (best)24.17■■□□□ 1.461e-6■□□□□ 9.4
EIF3DO15371 TTC3-209ENST00000438055 3606 ntTSL 518.13■□□□□ 0.491e-6■□□□□ 9.4
EIF3DO15371 TTC3-207ENST00000418766 3771 ntTSL 517.32■□□□□ 0.361e-6■□□□□ 9.4
EIF3DO15371 TTC3-219ENST00000485402 3626 ntTSL 515.7■□□□□ 0.11e-6■□□□□ 9.4
EIF3DO15371 HNRNPA2B1-203ENST00000360787 1724 ntTSL 516.49■□□□□ 0.234e-7■□□□□ 9.4
EIF3DO15371 HNRNPA2B1-206ENST00000490912 5328 ntTSL 215.82■□□□□ 0.124e-7■□□□□ 9.4
EIF3DO15371 HNRNPA2B1-204ENST00000463181 6284 ntTSL 214.58□□□□□ -0.084e-7■□□□□ 9.4
EIF3DO15371 HNRNPA2B1-202ENST00000356674 1711 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.364e-7■□□□□ 9.4
EIF3DO15371 HNRNPA2B1-208ENST00000618183 3539 ntTSL 5 BASIC11.81□□□□□ -0.524e-7■□□□□ 9.4
EIF3DO15371 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.054e-7■□□□□ 9.4
EIF3DO15371 FANCA-208ENST00000561722 696 ntTSL 313.5□□□□□ -0.251e-6■□□□□ 9.4
EIF3DO15371 FANCA-209ENST00000562424 745 ntTSL 212.48□□□□□ -0.411e-6■□□□□ 9.4
EIF3DO15371 DST-225ENST00000522360 530 ntTSL 56.38□□□□□ -1.392e-8■□□□□ 9.4
EIF3DO15371 PLXNB1-205ENST00000461261 851 ntTSL 512.74□□□□□ -0.372e-8■□□□□ 9.4
EIF3DO15371 PKD1P5-202ENST00000538166 606 ntTSL 321.59■■□□□ 1.051e-8■□□□□ 9.3
EIF3DO15371 PIEZO1-212ENST00000497793 1228 ntTSL 219.75■□□□□ 0.751e-8■□□□□ 9.3
EIF3DO15371 G3BP1-212ENST00000522761 1763 ntTSL 218.88■□□□□ 0.612e-8■□□□□ 9.3
EIF3DO15371 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.531e-8■□□□□ 9.3
EIF3DO15371 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.12■□□□□ 0.491e-8■□□□□ 9.3
EIF3DO15371 MAD2L1-202ENST00000333047 1277 ntTSL 1 (best)17.56■□□□□ 0.41e-8■□□□□ 9.3
EIF3DO15371 MAD2L1-203ENST00000504707 764 ntTSL 217.56■□□□□ 0.41e-8■□□□□ 9.3
EIF3DO15371 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.51■□□□□ 0.391e-8■□□□□ 9.3
EIF3DO15371 G3BP1-209ENST00000520578 530 ntTSL 317.02■□□□□ 0.322e-8■□□□□ 9.3
EIF3DO15371 G3BP1-213ENST00000523519 535 ntTSL 416.12■□□□□ 0.172e-8■□□□□ 9.3
EIF3DO15371 G3BP1-208ENST00000520177 2700 ntTSL 1 (best)15.98■□□□□ 0.152e-8■□□□□ 9.3
EIF3DO15371 MAD2L1-204ENST00000511295 528 ntTSL 215.81■□□□□ 0.121e-8■□□□□ 9.3
EIF3DO15371 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.111e-8■□□□□ 9.3
EIF3DO15371 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.041e-8■□□□□ 9.3
EIF3DO15371 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.021e-8■□□□□ 9.3
EIF3DO15371 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC14.52□□□□□ -0.091e-8■□□□□ 9.3
EIF3DO15371 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.11e-8■□□□□ 9.3
EIF3DO15371 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC14.01□□□□□ -0.171e-8■□□□□ 9.3
EIF3DO15371 SMARCA4-216ENST00000591545 5193 ntTSL 213.97□□□□□ -0.171e-8■□□□□ 9.3
Retrieved 100 of 4,069 protein–RNA pairs in 21.1 ms