RNA–Protein interactions for RNA: ENST00000534784.1

CFL1-215, Transcript of cofilin 1, humanhuman

TSL 3

Gene CFL1, Length 737 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Lamellipodium, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFL1-215ENST00000534784 NISCHQ9Y2I1 1504 aa45.58■■■■■ 4.89
CFL1-215ENST00000534784 CCDC180Q9P1Z9 1646 aa40.89■■■■■ 4.14
CFL1-215ENST00000534784 ABCC9O60706 1549 aa40.43■■■■■ 4.06
CFL1-215ENST00000534784 RB1CC1Q8TDY2 1594 aa38.66■■■■□ 3.78
CFL1-215ENST00000534784 NACADO15069 1562 aa38.47■■■■□ 3.75
CFL1-215ENST00000534784 DCAF8L2P0C7V8 631 aa38.07■■■■□ 3.68
CFL1-215ENST00000534784 MYO15BQ96JP2 1530 aa38.04■■■■□ 3.68
CFL1-215ENST00000534784 UNC13AQ9UPW8 1703 aa38.02■■■■□ 3.68
CFL1-215ENST00000534784 ZCCHC6Q5VYS8 1495 aaKnown RBP37.9■■■■□ 3.66
CFL1-215ENST00000534784 DCAF1Q9Y4B6 1507 aa37.69■■■■□ 3.62
CFL1-215ENST00000534784 BICRAQ9NZM4 1560 aa37.62■■■■□ 3.61
CFL1-215ENST00000534784 PABPN1Q86U42 306 aaKnown RBP eCLIP37.58■■■■□ 3.61
CFL1-215ENST00000534784 DNAJC5BQ9UF47 199 aa37.57■■■■□ 3.6
CFL1-215ENST00000534784 SCRIBQ14160 1630 aa37.24■■■■□ 3.55
CFL1-215ENST00000534784 SHROOM4Q9ULL8 1493 aa37.05■■■■□ 3.52
CFL1-215ENST00000534784 CC2D2AQ9P2K1 1620 aa36.62■■■■□ 3.45
CFL1-215ENST00000534784 EIF4G1Q04637 1599 aaKnown RBP36.61■■■■□ 3.45
CFL1-215ENST00000534784 CECR2Q9BXF3 1484 aa36.37■■■■□ 3.41
CFL1-215ENST00000534784 SMARCA4P51532 1647 aa35.57■■■■□ 3.28
CFL1-215ENST00000534784 NCAPD3P42695 1498 aa35.45■■■■□ 3.27
CFL1-215ENST00000534784 ATAD2BQ9ULI0 1458 aa35.42■■■■□ 3.26
CFL1-215ENST00000534784 BAZ1AQ9NRL2 1556 aaPredicted RBP35.37■■■■□ 3.25
CFL1-215ENST00000534784 SMARCA2P51531 1590 aa35.36■■■■□ 3.25
CFL1-215ENST00000534784 HMGXB3Q12766 1538 aa35.32■■■■□ 3.25
CFL1-215ENST00000534784 PEG3Q9GZU2 1588 aa35.21■■■■□ 3.23
CFL1-215ENST00000534784 MROH2BQ7Z745 1585 aa35.16■■■■□ 3.22
CFL1-215ENST00000534784 BAZ1BQ9UIG0 1483 aaKnown RBP35.09■■■■□ 3.21
CFL1-215ENST00000534784 NESP48681 1621 aa34.87■■■■□ 3.17
CFL1-215ENST00000534784 ERCC6Q03468 1493 aa34.84■■■■□ 3.17
CFL1-215ENST00000534784 WIZO95785 1651 aa34.81■■■■□ 3.16
CFL1-215ENST00000534784 CUX2O14529 1486 aa34.71■■■■□ 3.15
CFL1-215ENST00000534784 LAMC3Q9Y6N6 1575 aa34.68■■■■□ 3.14
CFL1-215ENST00000534784 THOC2Q8NI27 1593 aaKnown RBP34.57■■■■□ 3.12
CFL1-215ENST00000534784 KIF21AQ7Z4S6 1674 aa34.57■■■■□ 3.12
CFL1-215ENST00000534784 RSF1Q96T23 1441 aaPredicted RBP34.47■■■■□ 3.11
CFL1-215ENST00000534784 TOP2AP11388 1531 aaKnown RBP34.35■■■■□ 3.09
CFL1-215ENST00000534784 CADPSQ9ULU8 1353 aa34.35■■■■□ 3.09
CFL1-215ENST00000534784 PDS5BQ9NTI5 1447 aa34.33■■■■□ 3.09
CFL1-215ENST00000534784 DNAJC5Q9H3Z4 198 aa34.19■■■■□ 3.06
CFL1-215ENST00000534784 MRC2Q9UBG0 1479 aa34.12■■■■□ 3.05
CFL1-215ENST00000534784 WDR62O43379 1518 aa34.09■■■■□ 3.05
CFL1-215ENST00000534784 CFTRP13569 1480 aa34.09■■■■□ 3.05
CFL1-215ENST00000534784 CEP164Q9UPV0 1460 aa34.04■■■■□ 3.04
CFL1-215ENST00000534784 PRDM2Q13029 1718 aa34.03■■■■□ 3.04
CFL1-215ENST00000534784 FANCD2Q9BXW9 1451 aa34.02■■■■□ 3.04
CFL1-215ENST00000534784 CCDC88BA6NC98 1476 aa33.88■■■■□ 3.01
CFL1-215ENST00000534784 URB2Q14146 1524 aaKnown RBP33.78■■■■□ 3
CFL1-215ENST00000534784 TOPBP1Q92547 1522 aa33.45■■■□□ 2.95
CFL1-215ENST00000534784 DNMBPQ6XZF7 1577 aa33.39■■■□□ 2.94
CFL1-215ENST00000534784 IFT140Q96RY7 1462 aa33.31■■■□□ 2.92
CFL1-215ENST00000534784 ABCC8Q09428 1581 aa33.3■■■□□ 2.92
CFL1-215ENST00000534784 ZNF608Q9ULD9 1512 aaPredicted RBP33.29■■■□□ 2.92
CFL1-215ENST00000534784 EIF4G3O43432 1585 aaKnown RBP33.22■■■□□ 2.91
CFL1-215ENST00000534784 TARBP1Q13395 1621 aaKnown RBP33.2■■■□□ 2.91
CFL1-215ENST00000534784 POLA1P09884 1462 aaPredicted RBP33.13■■■□□ 2.89
CFL1-215ENST00000534784 SUPT5HO00267 1087 aaKnown RBP33.04■■■□□ 2.88
CFL1-215ENST00000534784 CUX1P39880 1505 aa33.02■■■□□ 2.88
CFL1-215ENST00000534784 OSCARQ8IYS5 282 aa33■■■□□ 2.87
CFL1-215ENST00000534784 RAD54L2Q9Y4B4 1467 aa32.98■■■□□ 2.87
CFL1-215ENST00000534784 FGD5Q6ZNL6 1462 aa32.97■■■□□ 2.87
CFL1-215ENST00000534784 AQRO60306 1485 aaKnown RBP eCLIP32.96■■■□□ 2.876e-6■■■■□ 23.2
CFL1-215ENST00000534784 CHD1O14646 1710 aa32.96■■■□□ 2.87
CFL1-215ENST00000534784 WDR97A6NE52 1622 aa32.9■■■□□ 2.86
CFL1-215ENST00000534784 SOGA1O94964 1423 aa32.87■■■□□ 2.85
CFL1-215ENST00000534784 TRIM41Q8WV44 630 aa32.82■■■□□ 2.84
CFL1-215ENST00000534784 RIMBP3CA6NJZ7 1639 aa32.81■■■□□ 2.84
CFL1-215ENST00000534784 RIMBP3BA6NNM3 1639 aa32.81■■■□□ 2.84
CFL1-215ENST00000534784 RIMBP3Q9UFD9 1639 aa32.81■■■□□ 2.84
CFL1-215ENST00000534784 TDRD9Q8NDG6 1382 aaKnown RBP32.77■■■□□ 2.84
CFL1-215ENST00000534784 PBRM1Q86U86 1689 aa32.7■■■□□ 2.83
CFL1-215ENST00000534784 SNAPC4Q5SXM2 1469 aa32.69■■■□□ 2.82
CFL1-215ENST00000534784 ARHGEF11O15085 1522 aa32.69■■■□□ 2.82
CFL1-215ENST00000534784 BIVM-ERCC5R4GMW8 1640 aa32.66■■■□□ 2.82
CFL1-215ENST00000534784 ABCA5Q8WWZ7 1642 aa32.64■■■□□ 2.82
CFL1-215ENST00000534784 ABCA10Q8WWZ4 1543 aa32.61■■■□□ 2.81
CFL1-215ENST00000534784 GRIN2BQ13224 1484 aa32.61■■■□□ 2.81
CFL1-215ENST00000534784 MAGI1Q96QZ7 1491 aaPredicted RBP32.6■■■□□ 2.81
CFL1-215ENST00000534784 TOP2BQ02880 1626 aa32.59■■■□□ 2.81
CFL1-215ENST00000534784 SYNJ1O43426 1573 aa32.59■■■□□ 2.81
CFL1-215ENST00000534784 FBLN2P98095 1184 aa32.54■■■□□ 2.8
CFL1-215ENST00000534784 GAPVD1Q14C86 1478 aa32.54■■■□□ 2.8
CFL1-215ENST00000534784 CLASP1Q7Z460 1538 aa32.51■■■□□ 2.8
CFL1-215ENST00000534784 WRNQ14191 1432 aaPredicted RBP eCLIP32.51■■■□□ 2.79
CFL1-215ENST00000534784 SYNJ2O15056 1496 aa32.48■■■□□ 2.79
CFL1-215ENST00000534784 ARAP1Q96P48 1450 aa32.4■■■□□ 2.78
CFL1-215ENST00000534784 CHMP7Q8WUX9 453 aaPredicted RBP32.36■■■□□ 2.77
CFL1-215ENST00000534784 ADAMTS12P58397 1594 aa32.35■■■□□ 2.77
CFL1-215ENST00000534784 GRIN2AQ12879 1464 aa32.23■■■□□ 2.75
CFL1-215ENST00000534784 CYB5RLQ6IPT4 315 aa32.23■■■□□ 2.75
CFL1-215ENST00000534784 ERICH3Q5RHP9 1530 aa32.21■■■□□ 2.75
CFL1-215ENST00000534784 CEP170Q5SW79 1584 aa32.18■■■□□ 2.74
CFL1-215ENST00000534784 FHAD1B1AJZ9 1412 aa32.11■■■□□ 2.73
CFL1-215ENST00000534784 NUP160Q12769 1436 aa32.11■■■□□ 2.73
CFL1-215ENST00000534784 ERCC6L2Q5T890 1561 aa32.04■■■□□ 2.72
CFL1-215ENST00000534784 SHROOM2Q13796 1616 aa32.04■■■□□ 2.72
CFL1-215ENST00000534784 RUSC2Q8N2Y8 1516 aa31.91■■■□□ 2.7
CFL1-215ENST00000534784 CUL7Q14999 1698 aa31.86■■■□□ 2.69
CFL1-215ENST00000534784 KIF27Q86VH2 1401 aa31.83■■■□□ 2.69
CFL1-215ENST00000534784 IGF1RP08069 1367 aa31.76■■■□□ 2.67
CFL1-215ENST00000534784 TRHP20396 242 aaPredicted RBP31.73■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms