RNA–Protein interactions for RNA: ENST00000523519.5

G3BP1-213, Transcript of G3BP stress granule assembly factor 1, humanhuman

TSL 4

Gene G3BP1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
G3BP1-213ENST00000523519 NISCHQ9Y2I1 1504 aa37.89■■■■□ 3.66
G3BP1-213ENST00000523519 CCDC180Q9P1Z9 1646 aa34■■■■□ 3.03
G3BP1-213ENST00000523519 ABCC9O60706 1549 aa33.89■■■■□ 3.02
G3BP1-213ENST00000523519 RB1CC1Q8TDY2 1594 aa32.32■■■□□ 2.76
G3BP1-213ENST00000523519 NACADO15069 1562 aa32.13■■■□□ 2.73
G3BP1-213ENST00000523519 DNAJC5BQ9UF47 199 aa31.95■■■□□ 2.71
G3BP1-213ENST00000523519 DCAF8L2P0C7V8 631 aa31.79■■■□□ 2.68
G3BP1-213ENST00000523519 MYO15BQ96JP2 1530 aa31.77■■■□□ 2.68
G3BP1-213ENST00000523519 UNC13AQ9UPW8 1703 aa31.58■■■□□ 2.65
G3BP1-213ENST00000523519 PABPN1Q86U42 306 aaKnown RBP eCLIP31.53■■■□□ 2.64
G3BP1-213ENST00000523519 ZCCHC6Q5VYS8 1495 aaKnown RBP31.42■■■□□ 2.62
G3BP1-213ENST00000523519 BICRAQ9NZM4 1560 aa31.42■■■□□ 2.62
G3BP1-213ENST00000523519 DCAF1Q9Y4B6 1507 aa31.36■■■□□ 2.61
G3BP1-213ENST00000523519 SHROOM4Q9ULL8 1493 aa31.04■■■□□ 2.56
G3BP1-213ENST00000523519 SCRIBQ14160 1630 aa30.9■■■□□ 2.54
G3BP1-213ENST00000523519 CC2D2AQ9P2K1 1620 aa30.65■■■□□ 2.5
G3BP1-213ENST00000523519 EIF4G1Q04637 1599 aaKnown RBP30.61■■■□□ 2.49
G3BP1-213ENST00000523519 CECR2Q9BXF3 1484 aa30.55■■■□□ 2.48
G3BP1-213ENST00000523519 DNAJC5Q9H3Z4 198 aa29.72■■■□□ 2.35
G3BP1-213ENST00000523519 NCAPD3P42695 1498 aa29.68■■■□□ 2.34
G3BP1-213ENST00000523519 ATAD2BQ9ULI0 1458 aa29.57■■■□□ 2.32
G3BP1-213ENST00000523519 SMARCA4P51532 1647 aa29.53■■■□□ 2.32
G3BP1-213ENST00000523519 SMARCA2P51531 1590 aa29.47■■■□□ 2.31
G3BP1-213ENST00000523519 HMGXB3Q12766 1538 aa29.45■■■□□ 2.31
G3BP1-213ENST00000523519 BAZ1AQ9NRL2 1556 aaPredicted RBP29.39■■■□□ 2.3
G3BP1-213ENST00000523519 PEG3Q9GZU2 1588 aa29.31■■■□□ 2.28
G3BP1-213ENST00000523519 CUX2O14529 1486 aa29.25■■■□□ 2.27
G3BP1-213ENST00000523519 BAZ1BQ9UIG0 1483 aaKnown RBP29.24■■■□□ 2.27
G3BP1-213ENST00000523519 ERCC6Q03468 1493 aa29.23■■■□□ 2.27
G3BP1-213ENST00000523519 MROH2BQ7Z745 1585 aa29.18■■■□□ 2.26
G3BP1-213ENST00000523519 NESP48681 1621 aa29.13■■■□□ 2.25
G3BP1-213ENST00000523519 LAMC3Q9Y6N6 1575 aa28.98■■■□□ 2.23
G3BP1-213ENST00000523519 THOC2Q8NI27 1593 aaKnown RBP28.88■■■□□ 2.21
G3BP1-213ENST00000523519 WIZO95785 1651 aa28.8■■■□□ 2.2
G3BP1-213ENST00000523519 PDS5BQ9NTI5 1447 aa28.79■■■□□ 2.2
G3BP1-213ENST00000523519 KIF21AQ7Z4S6 1674 aa28.76■■■□□ 2.19
G3BP1-213ENST00000523519 CADPSQ9ULU8 1353 aa28.75■■■□□ 2.19
G3BP1-213ENST00000523519 RSF1Q96T23 1441 aaPredicted RBP28.6■■■□□ 2.17
G3BP1-213ENST00000523519 MRC2Q9UBG0 1479 aa28.55■■■□□ 2.16
G3BP1-213ENST00000523519 WDR62O43379 1518 aa28.5■■■□□ 2.15
G3BP1-213ENST00000523519 TOP2AP11388 1531 aaKnown RBP28.48■■■□□ 2.15
G3BP1-213ENST00000523519 CFTRP13569 1480 aa28.45■■■□□ 2.14
G3BP1-213ENST00000523519 CEP164Q9UPV0 1460 aa28.42■■■□□ 2.14
G3BP1-213ENST00000523519 FANCD2Q9BXW9 1451 aa28.4■■■□□ 2.14
G3BP1-213ENST00000523519 TRIM41Q8WV44 630 aa28.32■■■□□ 2.12
G3BP1-213ENST00000523519 URB2Q14146 1524 aaKnown RBP28.18■■■□□ 2.1
G3BP1-213ENST00000523519 CCDC88BA6NC98 1476 aa28.14■■■□□ 2.09
G3BP1-213ENST00000523519 PRDM2Q13029 1718 aa28.13■■■□□ 2.09
G3BP1-213ENST00000523519 OSCARQ8IYS5 282 aa27.88■■■□□ 2.05
G3BP1-213ENST00000523519 IFT140Q96RY7 1462 aa27.88■■■□□ 2.05
G3BP1-213ENST00000523519 TOPBP1Q92547 1522 aa27.87■■■□□ 2.05
G3BP1-213ENST00000523519 ABCC8Q09428 1581 aa27.84■■■□□ 2.05
G3BP1-213ENST00000523519 ZNF608Q9ULD9 1512 aaPredicted RBP27.82■■■□□ 2.04
G3BP1-213ENST00000523519 DNMBPQ6XZF7 1577 aa27.78■■■□□ 2.04
G3BP1-213ENST00000523519 EIF4G3O43432 1585 aaKnown RBP27.66■■■□□ 2.02
G3BP1-213ENST00000523519 TARBP1Q13395 1621 aaKnown RBP27.65■■■□□ 2.02
G3BP1-213ENST00000523519 POLA1P09884 1462 aaPredicted RBP27.6■■■□□ 2.01
G3BP1-213ENST00000523519 AQRO60306 1485 aaKnown RBP eCLIP27.55■■■□□ 25e-8■■■■□ 26.3
G3BP1-213ENST00000523519 RIMBP3CA6NJZ7 1639 aa27.52■■■□□ 2
G3BP1-213ENST00000523519 RIMBP3BA6NNM3 1639 aa27.52■■■□□ 2
G3BP1-213ENST00000523519 RIMBP3Q9UFD9 1639 aa27.52■■■□□ 2
G3BP1-213ENST00000523519 RAD54L2Q9Y4B4 1467 aa27.46■■□□□ 1.99
G3BP1-213ENST00000523519 SOGA1O94964 1423 aa27.45■■□□□ 1.98
G3BP1-213ENST00000523519 ARHGEF11O15085 1522 aa27.45■■□□□ 1.98
G3BP1-213ENST00000523519 CHD1O14646 1710 aa27.42■■□□□ 1.98
G3BP1-213ENST00000523519 CUX1P39880 1505 aa27.41■■□□□ 1.98
G3BP1-213ENST00000523519 FGD5Q6ZNL6 1462 aa27.41■■□□□ 1.98
G3BP1-213ENST00000523519 WDR97A6NE52 1622 aa27.4■■□□□ 1.98
G3BP1-213ENST00000523519 TDRD9Q8NDG6 1382 aaKnown RBP27.37■■□□□ 1.97
G3BP1-213ENST00000523519 SNAPC4Q5SXM2 1469 aa27.27■■□□□ 1.96
G3BP1-213ENST00000523519 FBLN2P98095 1184 aa27.27■■□□□ 1.96
G3BP1-213ENST00000523519 MAGI1Q96QZ7 1491 aaPredicted RBP27.24■■□□□ 1.95
G3BP1-213ENST00000523519 GRIN2BQ13224 1484 aa27.23■■□□□ 1.95
G3BP1-213ENST00000523519 SUPT5HO00267 1087 aaKnown RBP27.21■■□□□ 1.95
G3BP1-213ENST00000523519 ARAP1Q96P48 1450 aa27.19■■□□□ 1.94
G3BP1-213ENST00000523519 CLASP1Q7Z460 1538 aa27.18■■□□□ 1.94
G3BP1-213ENST00000523519 CYB5RLQ6IPT4 315 aa27.18■■□□□ 1.94
G3BP1-213ENST00000523519 SYNJ2O15056 1496 aa27.14■■□□□ 1.94
G3BP1-213ENST00000523519 ABCA10Q8WWZ4 1543 aa27.14■■□□□ 1.94
G3BP1-213ENST00000523519 CHMP7Q8WUX9 453 aaPredicted RBP27.13■■□□□ 1.93
G3BP1-213ENST00000523519 GAPVD1Q14C86 1478 aa27.13■■□□□ 1.93
G3BP1-213ENST00000523519 SYNJ1O43426 1573 aa27.12■■□□□ 1.93
G3BP1-213ENST00000523519 ABCA5Q8WWZ7 1642 aa27.09■■□□□ 1.93
G3BP1-213ENST00000523519 PBRM1Q86U86 1689 aa27.09■■□□□ 1.93
G3BP1-213ENST00000523519 WRNQ14191 1432 aaPredicted RBP eCLIP27■■□□□ 1.91
G3BP1-213ENST00000523519 BIVM-ERCC5R4GMW8 1640 aa26.99■■□□□ 1.91
G3BP1-213ENST00000523519 TOP2BQ02880 1626 aa26.98■■□□□ 1.91
G3BP1-213ENST00000523519 TRHP20396 242 aaPredicted RBP26.95■■□□□ 1.9
G3BP1-213ENST00000523519 GRIN2AQ12879 1464 aa26.87■■□□□ 1.89
G3BP1-213ENST00000523519 ADAMTS12P58397 1594 aa26.87■■□□□ 1.89
G3BP1-213ENST00000523519 NUP160Q12769 1436 aa26.82■■□□□ 1.88
G3BP1-213ENST00000523519 FHAD1B1AJZ9 1412 aa26.8■■□□□ 1.88
G3BP1-213ENST00000523519 ERICH3Q5RHP9 1530 aa26.8■■□□□ 1.88
G3BP1-213ENST00000523519 CEP170Q5SW79 1584 aa26.78■■□□□ 1.88
G3BP1-213ENST00000523519 ERCC6L2Q5T890 1561 aa26.71■■□□□ 1.87
G3BP1-213ENST00000523519 SHROOM2Q13796 1616 aa26.7■■□□□ 1.86
G3BP1-213ENST00000523519 AEBP2Q6ZN18 517 aaPredicted RBP26.65■■□□□ 1.86
G3BP1-213ENST00000523519 RUSC2Q8N2Y8 1516 aa26.5■■□□□ 1.83
G3BP1-213ENST00000523519 PRG4Q92954 1404 aaPredicted RBP26.5■■□□□ 1.83
G3BP1-213ENST00000523519 JPH4Q96JJ6 628 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms