RNA–Protein interactions for RNA: ENST00000561991.5

PKD1-224, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 964 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-224ENST00000561991 NISCHQ9Y2I1 1504 aa42.86■■■■■ 4.45
PKD1-224ENST00000561991 CCDC180Q9P1Z9 1646 aa37.98■■■■□ 3.67
PKD1-224ENST00000561991 ABCC9O60706 1549 aa37.14■■■■□ 3.54
PKD1-224ENST00000561991 DCAF8L2P0C7V8 631 aa35.79■■■■□ 3.32
PKD1-224ENST00000561991 ZCCHC6Q5VYS8 1495 aaKnown RBP35.73■■■■□ 3.31
PKD1-224ENST00000561991 RB1CC1Q8TDY2 1594 aa35.68■■■■□ 3.3
PKD1-224ENST00000561991 NACADO15069 1562 aa35.67■■■■□ 3.3
PKD1-224ENST00000561991 MYO15BQ96JP2 1530 aa35.46■■■■□ 3.27
PKD1-224ENST00000561991 DCAF1Q9Y4B6 1507 aa35.39■■■■□ 3.26
PKD1-224ENST00000561991 UNC13AQ9UPW8 1703 aa34.98■■■■□ 3.19
PKD1-224ENST00000561991 SCRIBQ14160 1630 aa34.79■■■■□ 3.16
PKD1-224ENST00000561991 PABPN1Q86U42 306 aaKnown RBP eCLIP34.75■■■■□ 3.15
PKD1-224ENST00000561991 BICRAQ9NZM4 1560 aa34.7■■■■□ 3.14
PKD1-224ENST00000561991 SHROOM4Q9ULL8 1493 aa34.16■■■■□ 3.06
PKD1-224ENST00000561991 DNAJC5BQ9UF47 199 aa34■■■■□ 3.03
PKD1-224ENST00000561991 EIF4G1Q04637 1599 aaKnown RBP33.72■■■□□ 2.99
PKD1-224ENST00000561991 CC2D2AQ9P2K1 1620 aa33.57■■■□□ 2.97
PKD1-224ENST00000561991 CECR2Q9BXF3 1484 aa33.45■■■□□ 2.95
PKD1-224ENST00000561991 SMARCA4P51532 1647 aa33.24■■■□□ 2.91
PKD1-224ENST00000561991 BAZ1AQ9NRL2 1556 aaPredicted RBP33.17■■■□□ 2.9
PKD1-224ENST00000561991 MROH2BQ7Z745 1585 aa33.09■■■□□ 2.89
PKD1-224ENST00000561991 ATAD2BQ9ULI0 1458 aa33.01■■■□□ 2.88
PKD1-224ENST00000561991 NCAPD3P42695 1498 aa32.93■■■□□ 2.86
PKD1-224ENST00000561991 SMARCA2P51531 1590 aa32.92■■■□□ 2.86
PKD1-224ENST00000561991 PEG3Q9GZU2 1588 aa32.86■■■□□ 2.85
PKD1-224ENST00000561991 HMGXB3Q12766 1538 aa32.77■■■□□ 2.84
PKD1-224ENST00000561991 WIZO95785 1651 aa32.76■■■□□ 2.84
PKD1-224ENST00000561991 RSF1Q96T23 1441 aaPredicted RBP32.74■■■□□ 2.83
PKD1-224ENST00000561991 BAZ1BQ9UIG0 1483 aaKnown RBP32.73■■■□□ 2.83
PKD1-224ENST00000561991 TOP2AP11388 1531 aaKnown RBP32.35■■■□□ 2.77
PKD1-224ENST00000561991 NESP48681 1621 aa32.22■■■□□ 2.75
PKD1-224ENST00000561991 SUPT5HO00267 1087 aaKnown RBP32.06■■■□□ 2.72
PKD1-224ENST00000561991 LAMC3Q9Y6N6 1575 aa32.02■■■□□ 2.72
PKD1-224ENST00000561991 CCDC88BA6NC98 1476 aa32.01■■■□□ 2.71
PKD1-224ENST00000561991 CADPSQ9ULU8 1353 aa31.99■■■□□ 2.71
PKD1-224ENST00000561991 ERCC6Q03468 1493 aa31.92■■■□□ 2.7
PKD1-224ENST00000561991 CFTRP13569 1480 aa31.84■■■□□ 2.69
PKD1-224ENST00000561991 KIF21AQ7Z4S6 1674 aa31.8■■■□□ 2.68
PKD1-224ENST00000561991 PDS5BQ9NTI5 1447 aa31.78■■■□□ 2.68
PKD1-224ENST00000561991 FANCD2Q9BXW9 1451 aa31.65■■■□□ 2.66
PKD1-224ENST00000561991 THOC2Q8NI27 1593 aaKnown RBP31.64■■■□□ 2.66
PKD1-224ENST00000561991 PRDM2Q13029 1718 aa31.6■■■□□ 2.65
PKD1-224ENST00000561991 CEP164Q9UPV0 1460 aa31.57■■■□□ 2.64
PKD1-224ENST00000561991 MRC2Q9UBG0 1479 aa31.5■■■□□ 2.63
PKD1-224ENST00000561991 CUX2O14529 1486 aa31.49■■■□□ 2.63
PKD1-224ENST00000561991 WDR62O43379 1518 aa31.4■■■□□ 2.62
PKD1-224ENST00000561991 URB2Q14146 1524 aaKnown RBP31.37■■■□□ 2.61
PKD1-224ENST00000561991 TOPBP1Q92547 1522 aa31.17■■■□□ 2.58
PKD1-224ENST00000561991 DNMBPQ6XZF7 1577 aa31.13■■■□□ 2.57
PKD1-224ENST00000561991 ABCC8Q09428 1581 aa31.05■■■□□ 2.56
PKD1-224ENST00000561991 CUX1P39880 1505 aa31.03■■■□□ 2.56
PKD1-224ENST00000561991 POLA1P09884 1462 aaPredicted RBP30.92■■■□□ 2.54
PKD1-224ENST00000561991 IFT140Q96RY7 1462 aa30.89■■■□□ 2.54
PKD1-224ENST00000561991 FGD5Q6ZNL6 1462 aa30.88■■■□□ 2.53
PKD1-224ENST00000561991 ZNF608Q9ULD9 1512 aaPredicted RBP30.84■■■□□ 2.53
PKD1-224ENST00000561991 TARBP1Q13395 1621 aaKnown RBP30.84■■■□□ 2.53
PKD1-224ENST00000561991 RAD54L2Q9Y4B4 1467 aa30.83■■■□□ 2.53
PKD1-224ENST00000561991 WRNQ14191 1432 aaPredicted RBP eCLIP30.83■■■□□ 2.53
PKD1-224ENST00000561991 SYNJ1O43426 1573 aa30.82■■■□□ 2.52
PKD1-224ENST00000561991 SOGA1O94964 1423 aa30.77■■■□□ 2.52
PKD1-224ENST00000561991 TOP2BQ02880 1626 aa30.76■■■□□ 2.51
PKD1-224ENST00000561991 BIVM-ERCC5R4GMW8 1640 aa30.76■■■□□ 2.51
PKD1-224ENST00000561991 EIF4G3O43432 1585 aaKnown RBP30.69■■■□□ 2.5
PKD1-224ENST00000561991 AQRO60306 1485 aaKnown RBP eCLIP30.67■■■□□ 2.5
PKD1-224ENST00000561991 TDRD9Q8NDG6 1382 aaKnown RBP30.63■■■□□ 2.49
PKD1-224ENST00000561991 WDR97A6NE52 1622 aa30.62■■■□□ 2.49
PKD1-224ENST00000561991 ABCA10Q8WWZ4 1543 aa30.55■■■□□ 2.48
PKD1-224ENST00000561991 ABCA5Q8WWZ7 1642 aa30.44■■■□□ 2.46
PKD1-224ENST00000561991 GAPVD1Q14C86 1478 aa30.42■■■□□ 2.46
PKD1-224ENST00000561991 DNAJC5Q9H3Z4 198 aa30.38■■■□□ 2.45
PKD1-224ENST00000561991 PBRM1Q86U86 1689 aa30.38■■■□□ 2.45
PKD1-224ENST00000561991 GRIN2BQ13224 1484 aa30.38■■■□□ 2.45
PKD1-224ENST00000561991 SNAPC4Q5SXM2 1469 aa30.38■■■□□ 2.45
PKD1-224ENST00000561991 CHD1O14646 1710 aa30.28■■■□□ 2.44
PKD1-224ENST00000561991 MAGI1Q96QZ7 1491 aaPredicted RBP30.25■■■□□ 2.43
PKD1-224ENST00000561991 FBLN2P98095 1184 aa30.24■■■□□ 2.43
PKD1-224ENST00000561991 OSCARQ8IYS5 282 aa30.22■■■□□ 2.43
PKD1-224ENST00000561991 TRIM41Q8WV44 630 aa30.2■■■□□ 2.43
PKD1-224ENST00000561991 SYNJ2O15056 1496 aa30.16■■■□□ 2.42
PKD1-224ENST00000561991 ERICH3Q5RHP9 1530 aa30.16■■■□□ 2.42
PKD1-224ENST00000561991 ADAMTS12P58397 1594 aa30.15■■■□□ 2.42
PKD1-224ENST00000561991 KIF27Q86VH2 1401 aa30.14■■■□□ 2.42
PKD1-224ENST00000561991 CHMP7Q8WUX9 453 aaPredicted RBP30.13■■■□□ 2.41
PKD1-224ENST00000561991 RUSC2Q8N2Y8 1516 aa30.06■■■□□ 2.4
PKD1-224ENST00000561991 FHAD1B1AJZ9 1412 aa30.05■■■□□ 2.4
PKD1-224ENST00000561991 IGF1RP08069 1367 aa30.05■■■□□ 2.4
PKD1-224ENST00000561991 GRIN2AQ12879 1464 aa30■■■□□ 2.39
PKD1-224ENST00000561991 CHIC1Q5VXU3 224 aa29.99■■■□□ 2.39
PKD1-224ENST00000561991 CLASP1Q7Z460 1538 aa29.93■■■□□ 2.38
PKD1-224ENST00000561991 CUL7Q14999 1698 aa29.91■■■□□ 2.38
PKD1-224ENST00000561991 CEP170Q5SW79 1584 aa29.9■■■□□ 2.38
PKD1-224ENST00000561991 CARMIL1Q5VZK9 1371 aa29.86■■■□□ 2.37
PKD1-224ENST00000561991 NUP160Q12769 1436 aa29.86■■■□□ 2.37
PKD1-224ENST00000561991 RIMBP3CA6NJZ7 1639 aa29.81■■■□□ 2.36
PKD1-224ENST00000561991 RIMBP3BA6NNM3 1639 aa29.81■■■□□ 2.36
PKD1-224ENST00000561991 RIMBP3Q9UFD9 1639 aa29.81■■■□□ 2.36
PKD1-224ENST00000561991 ARHGEF11O15085 1522 aa29.8■■■□□ 2.36
PKD1-224ENST00000561991 RAPGEF2Q9Y4G8 1499 aa29.68■■■□□ 2.34
PKD1-224ENST00000561991 FAM9AQ8IZU1 332 aaPredicted RBP29.67■■■□□ 2.34
PKD1-224ENST00000561991 PRXQ9BXM0 1461 aa29.64■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms