Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC187A0A096LP49 pRNA.6-201ENST00000610482 90 ntBASIC21.62■■□□□ 1.05
CCDC187A0A096LP49 pRNA.5-201ENST00000612139 90 ntBASIC21.62■■□□□ 1.05
CCDC187A0A096LP49 pRNA.11-201ENST00000618423 90 ntBASIC21.62■■□□□ 1.05
CCDC187A0A096LP49 pRNA.13-201ENST00000619112 90 ntBASIC21.62■■□□□ 1.05
CCDC187A0A096LP49 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.62■■□□□ 1.05
CCDC187A0A096LP49 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.62■■□□□ 1.05
CCDC187A0A096LP49 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC187A0A096LP49 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CCDC187A0A096LP49 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CCDC187A0A096LP49 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.61■■□□□ 1.05
CCDC187A0A096LP49 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC187A0A096LP49 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CCDC187A0A096LP49 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CCDC187A0A096LP49 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CCDC187A0A096LP49 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC187A0A096LP49 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
CCDC187A0A096LP49 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC187A0A096LP49 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.61■■□□□ 1.05
CCDC187A0A096LP49 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CCDC187A0A096LP49 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.61■■□□□ 1.05
CCDC187A0A096LP49 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.61■■□□□ 1.05
CCDC187A0A096LP49 DUSP8P4-201ENST00000399538 1761 ntBASIC21.61■■□□□ 1.05
CCDC187A0A096LP49 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC187A0A096LP49 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CCDC187A0A096LP49 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC187A0A096LP49 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.6■■□□□ 1.05
CCDC187A0A096LP49 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC187A0A096LP49 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CCDC187A0A096LP49 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.6■■□□□ 1.05
CCDC187A0A096LP49 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.6■■□□□ 1.05
CCDC187A0A096LP49 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.6■■□□□ 1.05
CCDC187A0A096LP49 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC187A0A096LP49 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC187A0A096LP49 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC187A0A096LP49 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC187A0A096LP49 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC187A0A096LP49 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
CCDC187A0A096LP49 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC187A0A096LP49 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC187A0A096LP49 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC187A0A096LP49 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC187A0A096LP49 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.58■■□□□ 1.05
CCDC187A0A096LP49 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC187A0A096LP49 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
CCDC187A0A096LP49 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.58■■□□□ 1.05
CCDC187A0A096LP49 YBX1P1-201ENST00000445822 960 ntBASIC21.58■■□□□ 1.05
CCDC187A0A096LP49 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.58■■□□□ 1.05
CCDC187A0A096LP49 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
CCDC187A0A096LP49 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.58■■□□□ 1.04
CCDC187A0A096LP49 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC187A0A096LP49 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC187A0A096LP49 TSPY26P-201ENST00000476365 1326 ntBASIC21.57■■□□□ 1.04
CCDC187A0A096LP49 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC187A0A096LP49 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC187A0A096LP49 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC187A0A096LP49 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.57■■□□□ 1.04
CCDC187A0A096LP49 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.57■■□□□ 1.04
CCDC187A0A096LP49 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC187A0A096LP49 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.57■■□□□ 1.04
CCDC187A0A096LP49 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.57■■□□□ 1.04
CCDC187A0A096LP49 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.57■■□□□ 1.04
CCDC187A0A096LP49 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC187A0A096LP49 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
CCDC187A0A096LP49 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC187A0A096LP49 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.56■■□□□ 1.04
CCDC187A0A096LP49 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.56■■□□□ 1.04
CCDC187A0A096LP49 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC187A0A096LP49 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.56■■□□□ 1.04
CCDC187A0A096LP49 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC187A0A096LP49 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC187A0A096LP49 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC187A0A096LP49 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.56■■□□□ 1.04
CCDC187A0A096LP49 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.56■■□□□ 1.04
CCDC187A0A096LP49 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC187A0A096LP49 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC187A0A096LP49 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC187A0A096LP49 AC141586.4-201ENST00000624558 1573 ntBASIC21.56■■□□□ 1.04
CCDC187A0A096LP49 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC187A0A096LP49 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC187A0A096LP49 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.56■■□□□ 1.04
CCDC187A0A096LP49 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC187A0A096LP49 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.55■■□□□ 1.04
CCDC187A0A096LP49 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC187A0A096LP49 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC187A0A096LP49 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC187A0A096LP49 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC187A0A096LP49 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CCDC187A0A096LP49 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC187A0A096LP49 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CCDC187A0A096LP49 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC187A0A096LP49 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC187A0A096LP49 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.54■■□□□ 1.04
CCDC187A0A096LP49 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.54■■□□□ 1.04
CCDC187A0A096LP49 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC187A0A096LP49 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.54■■□□□ 1.04
CCDC187A0A096LP49 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.54■■□□□ 1.04
CCDC187A0A096LP49 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC187A0A096LP49 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC187A0A096LP49 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms