Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 KRT8P28-201ENST00000433288 1390 ntBASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB1Q9Y5F3 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 MPV17-204ENST00000399052 749 ntTSL 4 BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 AL354877.1-201ENST00000424412 413 ntBASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 AC253536.4-201ENST00000440539 267 ntBASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 CICP12-201ENST00000455801 843 ntBASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 AC021723.1-201ENST00000486306 515 ntBASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 NUP210P1-202ENST00000504322 710 ntBASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 AL133499.1-201ENST00000596207 608 ntBASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 AL136301.1-201ENST00000615830 422 ntBASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 AC079336.7-201ENST00000623428 1078 ntBASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHB1Q9Y5F3 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 SHC1P1-201ENST00000425230 1745 ntBASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 AC020910.6-201ENST00000623084 1459 ntBASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 MSRA-203ENST00000441698 788 ntTSL 2 BASIC14.53□□□□□ -0.08
PCDHB1Q9Y5F3 EEF1DP6-201ENST00000449232 372 ntBASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms