Protein–RNA interactions for Protein: Q9C030

TRIM6, Tripartite motif-containing protein 6, humanhuman

Predicted RBP Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6Q9C030 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM6Q9C030 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
TRIM6Q9C030 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM6Q9C030 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM6Q9C030 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM6Q9C030 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TRIM6Q9C030 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM6Q9C030 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM6Q9C030 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM6Q9C030 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM6Q9C030 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM6Q9C030 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TRIM6Q9C030 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM6Q9C030 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TRIM6Q9C030 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
TRIM6Q9C030 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM6Q9C030 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
TRIM6Q9C030 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM6Q9C030 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM6Q9C030 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRIM6Q9C030 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM6Q9C030 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TRIM6Q9C030 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM6Q9C030 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM6Q9C030 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRIM6Q9C030 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIM6Q9C030 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM6Q9C030 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM6Q9C030 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM6Q9C030 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIM6Q9C030 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM6Q9C030 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
TRIM6Q9C030 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM6Q9C030 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM6Q9C030 AL157407.1-201ENST00000435784 904 ntBASIC16.03■□□□□ 0.16
TRIM6Q9C030 AL133466.1-201ENST00000447582 150 ntBASIC16.03■□□□□ 0.16
TRIM6Q9C030 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM6Q9C030 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.03■□□□□ 0.16
TRIM6Q9C030 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC16.03■□□□□ 0.16
TRIM6Q9C030 RBM8B-201ENST00000555532 525 ntBASIC16.03■□□□□ 0.16
TRIM6Q9C030 SNORD3B-2-202ENST00000571722 791 ntBASIC16.03■□□□□ 0.16
TRIM6Q9C030 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC16.03■□□□□ 0.16
TRIM6Q9C030 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIM6Q9C030 CU633904.3-201ENST00000624042 1029 ntBASIC16.03■□□□□ 0.16
TRIM6Q9C030 NAP1L6-202ENST00000641404 1222 ntBASIC16.03■□□□□ 0.16
TRIM6Q9C030 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM6Q9C030 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TRIM6Q9C030 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM6Q9C030 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM6Q9C030 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM6Q9C030 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM6Q9C030 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
TRIM6Q9C030 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM6Q9C030 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM6Q9C030 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM6Q9C030 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM6Q9C030 AJ011931.1-201ENST00000618749 2492 ntBASIC16.03■□□□□ 0.16
TRIM6Q9C030 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIM6Q9C030 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRIM6Q9C030 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM6Q9C030 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM6Q9C030 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TRIM6Q9C030 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM6Q9C030 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
TRIM6Q9C030 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM6Q9C030 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
TRIM6Q9C030 AL157791.1-201ENST00000553667 1699 ntBASIC16.02■□□□□ 0.16
TRIM6Q9C030 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TRIM6Q9C030 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TRIM6Q9C030 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM6Q9C030 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.02■□□□□ 0.16
TRIM6Q9C030 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM6Q9C030 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM6Q9C030 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM6Q9C030 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
TRIM6Q9C030 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM6Q9C030 AC136759.1-202ENST00000530858 2194 ntBASIC16.02■□□□□ 0.16
TRIM6Q9C030 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM6Q9C030 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM6Q9C030 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM6Q9C030 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM6Q9C030 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
TRIM6Q9C030 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM6Q9C030 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM6Q9C030 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM6Q9C030 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.02■□□□□ 0.16
TRIM6Q9C030 VDAC1P1-201ENST00000439229 848 ntBASIC16.02■□□□□ 0.16
TRIM6Q9C030 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM6Q9C030 HLA-J-204ENST00000495278 958 ntBASIC16.02■□□□□ 0.16
TRIM6Q9C030 RCC2P8-201ENST00000502779 1035 ntBASIC16.02■□□□□ 0.16
TRIM6Q9C030 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.02■□□□□ 0.16
TRIM6Q9C030 SCARNA21-201ENST00000517026 139 ntBASIC16.02■□□□□ 0.16
TRIM6Q9C030 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.02■□□□□ 0.16
TRIM6Q9C030 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TRIM6Q9C030 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TRIM6Q9C030 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC16.02■□□□□ 0.16
TRIM6Q9C030 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC16.02■□□□□ 0.16
TRIM6Q9C030 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM6Q9C030 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.02■□□□□ 0.16
TRIM6Q9C030 RN7SL774P-201ENST00000577467 290 ntBASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms