Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
SMIM4Q8WVI0 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
SMIM4Q8WVI0 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SMIM4Q8WVI0 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
SMIM4Q8WVI0 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.44□□□□□ -0.42
SMIM4Q8WVI0 GHET1-201ENST00000627071 1906 ntBASIC12.44□□□□□ -0.42
SMIM4Q8WVI0 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SMIM4Q8WVI0 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SMIM4Q8WVI0 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SMIM4Q8WVI0 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SMIM4Q8WVI0 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SMIM4Q8WVI0 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SMIM4Q8WVI0 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SMIM4Q8WVI0 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SMIM4Q8WVI0 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SMIM4Q8WVI0 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.44□□□□□ -0.42
SMIM4Q8WVI0 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SMIM4Q8WVI0 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SMIM4Q8WVI0 PCDHB19P-202ENST00000625133 2914 ntBASIC12.44□□□□□ -0.42
SMIM4Q8WVI0 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SMIM4Q8WVI0 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 SLBP-205ENST00000488267 987 ntTSL 2 BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 TIMM17BP1-201ENST00000545713 516 ntBASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 AC092337.1-201ENST00000568699 1129 ntBASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 AC104506.1-201ENST00000609247 429 ntBASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 IRF5-214ENST00000613821 595 ntTSL 5 BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 BX539320.1-201ENST00000623759 877 ntBASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 AC005014.1-201ENST00000432006 2976 ntBASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 LINC01165-201ENST00000445190 1623 ntBASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SMIM4Q8WVI0 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 PDIA3P1-201ENST00000471856 1510 ntBASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SMIM4Q8WVI0 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms