Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDH19Q8TAB3 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
PCDH19Q8TAB3 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDH19Q8TAB3 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.99□□□□□ -0.01
PCDH19Q8TAB3 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 PFN1P12-201ENST00000455938 534 ntBASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 TMEM198B-204ENST00000484016 896 ntBASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 RBM8B-201ENST00000555532 525 ntBASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH19Q8TAB3 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.97□□□□□ -0.01
PCDH19Q8TAB3 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDH19Q8TAB3 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDH19Q8TAB3 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.97□□□□□ -0.01
PCDH19Q8TAB3 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDH19Q8TAB3 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDH19Q8TAB3 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCDH19Q8TAB3 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDH19Q8TAB3 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.97□□□□□ -0.01
PCDH19Q8TAB3 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCDH19Q8TAB3 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.97□□□□□ -0.01
PCDH19Q8TAB3 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCDH19Q8TAB3 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.97□□□□□ -0.01
PCDH19Q8TAB3 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
PCDH19Q8TAB3 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDH19Q8TAB3 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCDH19Q8TAB3 AC099548.2-209ENST00000480264 625 ntBASIC14.97□□□□□ -0.01
PCDH19Q8TAB3 FAM86HP-204ENST00000513466 959 ntBASIC14.97□□□□□ -0.01
PCDH19Q8TAB3 AC100827.2-201ENST00000563214 1194 ntBASIC14.97□□□□□ -0.01
PCDH19Q8TAB3 AC091271.1-201ENST00000611877 1162 ntBASIC14.97□□□□□ -0.01
PCDH19Q8TAB3 MIR6787-201ENST00000616675 61 ntBASIC14.97□□□□□ -0.01
PCDH19Q8TAB3 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.97□□□□□ -0.01
PCDH19Q8TAB3 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDH19Q8TAB3 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCDH19Q8TAB3 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
PCDH19Q8TAB3 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDH19Q8TAB3 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.97□□□□□ -0.01
PCDH19Q8TAB3 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDH19Q8TAB3 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.97□□□□□ -0.01
PCDH19Q8TAB3 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.97□□□□□ -0.01
PCDH19Q8TAB3 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDH19Q8TAB3 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDH19Q8TAB3 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDH19Q8TAB3 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.97□□□□□ -0.01
PCDH19Q8TAB3 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDH19Q8TAB3 AC015818.8-201ENST00000587907 1519 ntBASIC14.97□□□□□ -0.01
PCDH19Q8TAB3 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.96□□□□□ -0.01
PCDH19Q8TAB3 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.96□□□□□ -0.01
PCDH19Q8TAB3 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PCDH19Q8TAB3 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.96□□□□□ -0.01
PCDH19Q8TAB3 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDH19Q8TAB3 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PCDH19Q8TAB3 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms