Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.3□□□□□ -0.28
HTR1AP08908 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.3□□□□□ -0.28
HTR1AP08908 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1AP08908 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1AP08908 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1AP08908 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1AP08908 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.29□□□□□ -0.28
HTR1AP08908 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1AP08908 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
HTR1AP08908 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC13.29□□□□□ -0.28
HTR1AP08908 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
HTR1AP08908 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1AP08908 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1AP08908 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1AP08908 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
HTR1AP08908 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC13.29□□□□□ -0.28
HTR1AP08908 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1AP08908 AL359845.1-201ENST00000458202 1648 ntBASIC13.29□□□□□ -0.28
HTR1AP08908 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.29□□□□□ -0.28
HTR1AP08908 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1AP08908 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1AP08908 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC13.29□□□□□ -0.28
HTR1AP08908 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1AP08908 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1AP08908 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1AP08908 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
HTR1AP08908 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.29□□□□□ -0.28
HTR1AP08908 AL391647.1-201ENST00000395664 511 ntBASIC13.29□□□□□ -0.28
HTR1AP08908 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1AP08908 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.29□□□□□ -0.28
HTR1AP08908 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
HTR1AP08908 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.29□□□□□ -0.28
HTR1AP08908 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.29□□□□□ -0.28
HTR1AP08908 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.29□□□□□ -0.28
HTR1AP08908 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.29□□□□□ -0.28
HTR1AP08908 AC044860.1-202ENST00000559481 777 ntBASIC13.29□□□□□ -0.28
HTR1AP08908 DUX4L47-201ENST00000566374 394 ntBASIC13.29□□□□□ -0.28
HTR1AP08908 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.29□□□□□ -0.28
HTR1AP08908 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1AP08908 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1AP08908 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1AP08908 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
HTR1AP08908 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
HTR1AP08908 SALL4P5-201ENST00000419001 1760 ntBASIC13.29□□□□□ -0.28
HTR1AP08908 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
HTR1AP08908 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1AP08908 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1AP08908 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1AP08908 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1AP08908 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1AP08908 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
HTR1AP08908 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1AP08908 AC003102.2-201ENST00000589195 1469 ntBASIC13.29□□□□□ -0.28
HTR1AP08908 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC13.29□□□□□ -0.28
HTR1AP08908 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1AP08908 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1AP08908 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1AP08908 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1AP08908 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
HTR1AP08908 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HTR1AP08908 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HTR1AP08908 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
HTR1AP08908 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.28□□□□□ -0.28
HTR1AP08908 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HTR1AP08908 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HTR1AP08908 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HTR1AP08908 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
HTR1AP08908 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HTR1AP08908 AC004623.1-201ENST00000624592 2127 ntBASIC13.28□□□□□ -0.28
HTR1AP08908 AC060814.4-201ENST00000594169 2163 ntBASIC13.28□□□□□ -0.28
HTR1AP08908 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HTR1AP08908 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HTR1AP08908 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC13.28□□□□□ -0.28
HTR1AP08908 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HTR1AP08908 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HTR1AP08908 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HTR1AP08908 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HTR1AP08908 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HTR1AP08908 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HTR1AP08908 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC13.28□□□□□ -0.28
HTR1AP08908 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HTR1AP08908 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HTR1AP08908 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HTR1AP08908 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
HTR1AP08908 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
HTR1AP08908 AC254562.1-201ENST00000417586 456 ntBASIC13.28□□□□□ -0.28
HTR1AP08908 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.28□□□□□ -0.28
HTR1AP08908 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HTR1AP08908 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.28□□□□□ -0.28
HTR1AP08908 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
HTR1AP08908 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
HTR1AP08908 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
HTR1AP08908 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
HTR1AP08908 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
HTR1AP08908 AL671883.3-201ENST00000603274 991 ntBASIC13.28□□□□□ -0.28
HTR1AP08908 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.28□□□□□ -0.28
HTR1AP08908 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HTR1AP08908 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
HTR1AP08908 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.28□□□□□ -0.28
HTR1AP08908 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms