Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 AL022313.4-201ENST00000562756 2046 ntBASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 AC067931.2-201ENST00000623655 2003 ntBASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 AL512430.1-201ENST00000392575 860 ntBASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 BANF1P3-201ENST00000412556 261 ntBASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 AL807761.2-201ENST00000422849 729 ntBASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 AC078991.1-201ENST00000437297 610 ntBASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 AC019193.1-201ENST00000506678 823 ntBASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 ALG1L13P-202ENST00000519320 584 ntBASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 AC084781.1-201ENST00000613737 656 ntBASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 AP003419.4-201ENST00000616071 517 ntBASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 AC242376.2-201ENST00000619355 883 ntBASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 MPRIPP1-201ENST00000452433 1089 ntBASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 MIR6769A-201ENST00000617340 73 ntBASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 CROCCP1-201ENST00000426910 5675 ntBASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 AL591122.2-201ENST00000624125 1853 ntBASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 CFL1-206ENST00000527344 962 ntTSL 2 BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 NEU3-207ENST00000534628 746 ntTSL 2 BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC12.8□□□□□ -0.36
KIAA1549Q9HCM3 AC093752.3-201ENST00000567343 901 ntBASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms