Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
XRN1Q8IZH2 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
XRN1Q8IZH2 POLL-206ENST00000370172 2308 ntTSL 2 BASIC19.41■□□□□ 0.7
XRN1Q8IZH2 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
XRN1Q8IZH2 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
XRN1Q8IZH2 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
XRN1Q8IZH2 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC19.41■□□□□ 0.7
XRN1Q8IZH2 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
XRN1Q8IZH2 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
XRN1Q8IZH2 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
XRN1Q8IZH2 AC006328.1-201ENST00000437571 379 ntBASIC19.41■□□□□ 0.7
XRN1Q8IZH2 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
XRN1Q8IZH2 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC19.41■□□□□ 0.7
XRN1Q8IZH2 AC011431.1-201ENST00000512971 230 ntBASIC19.41■□□□□ 0.7
XRN1Q8IZH2 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC19.41■□□□□ 0.7
XRN1Q8IZH2 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
XRN1Q8IZH2 GRAMD4P6-201ENST00000556999 244 ntBASIC19.41■□□□□ 0.7
XRN1Q8IZH2 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
XRN1Q8IZH2 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC19.41■□□□□ 0.7
XRN1Q8IZH2 AC092384.3-202ENST00000564646 2873 ntBASIC19.41■□□□□ 0.7
XRN1Q8IZH2 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
XRN1Q8IZH2 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
XRN1Q8IZH2 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
XRN1Q8IZH2 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
XRN1Q8IZH2 AC104640.1-201ENST00000562617 2109 ntBASIC19.41■□□□□ 0.7
XRN1Q8IZH2 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
XRN1Q8IZH2 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
XRN1Q8IZH2 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
XRN1Q8IZH2 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
XRN1Q8IZH2 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
XRN1Q8IZH2 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
XRN1Q8IZH2 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.4■□□□□ 0.7
XRN1Q8IZH2 TUBB8P4-201ENST00000511806 1324 ntBASIC19.4■□□□□ 0.7
XRN1Q8IZH2 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
XRN1Q8IZH2 SNX15-201ENST00000352068 771 ntTSL 5 BASIC19.4■□□□□ 0.7
XRN1Q8IZH2 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
XRN1Q8IZH2 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC19.4■□□□□ 0.7
XRN1Q8IZH2 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
XRN1Q8IZH2 MIR1307-201ENST00000408840 149 ntBASIC19.4■□□□□ 0.7
XRN1Q8IZH2 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC19.4■□□□□ 0.7
XRN1Q8IZH2 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
XRN1Q8IZH2 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
XRN1Q8IZH2 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
XRN1Q8IZH2 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
XRN1Q8IZH2 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
XRN1Q8IZH2 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
XRN1Q8IZH2 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
XRN1Q8IZH2 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC19.4■□□□□ 0.7
XRN1Q8IZH2 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
XRN1Q8IZH2 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC19.4■□□□□ 0.7
XRN1Q8IZH2 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
XRN1Q8IZH2 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
XRN1Q8IZH2 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC19.4■□□□□ 0.7
XRN1Q8IZH2 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
XRN1Q8IZH2 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
XRN1Q8IZH2 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC19.39■□□□□ 0.7
XRN1Q8IZH2 MIR632-201ENST00000385193 94 ntBASIC19.39■□□□□ 0.7
XRN1Q8IZH2 AHCYP3-201ENST00000420053 1279 ntBASIC19.39■□□□□ 0.7
XRN1Q8IZH2 CCND3P1-201ENST00000438347 580 ntBASIC19.39■□□□□ 0.7
XRN1Q8IZH2 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC19.39■□□□□ 0.7
XRN1Q8IZH2 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
XRN1Q8IZH2 RN7SL605P-201ENST00000577229 281 ntBASIC19.39■□□□□ 0.7
XRN1Q8IZH2 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
XRN1Q8IZH2 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC19.39■□□□□ 0.7
XRN1Q8IZH2 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
XRN1Q8IZH2 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
XRN1Q8IZH2 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
XRN1Q8IZH2 AC126177.1-201ENST00000547829 2218 ntBASIC19.39■□□□□ 0.7
XRN1Q8IZH2 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
XRN1Q8IZH2 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
XRN1Q8IZH2 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
XRN1Q8IZH2 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
XRN1Q8IZH2 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
XRN1Q8IZH2 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
XRN1Q8IZH2 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.39■□□□□ 0.69
XRN1Q8IZH2 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
XRN1Q8IZH2 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
XRN1Q8IZH2 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
XRN1Q8IZH2 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
XRN1Q8IZH2 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
XRN1Q8IZH2 GPI-205ENST00000586425 1799 ntTSL 5 BASIC19.39■□□□□ 0.69
XRN1Q8IZH2 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
XRN1Q8IZH2 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
XRN1Q8IZH2 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
XRN1Q8IZH2 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
XRN1Q8IZH2 AL590824.1-201ENST00000403828 1349 ntBASIC19.39■□□□□ 0.69
XRN1Q8IZH2 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC19.39■□□□□ 0.69
XRN1Q8IZH2 GH1-203ENST00000351388 685 ntTSL 2 BASIC19.39■□□□□ 0.69
XRN1Q8IZH2 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC19.39■□□□□ 0.69
XRN1Q8IZH2 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC19.39■□□□□ 0.69
XRN1Q8IZH2 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC19.39■□□□□ 0.69
XRN1Q8IZH2 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC19.39■□□□□ 0.69
XRN1Q8IZH2 AC108724.1-201ENST00000481669 352 ntBASIC19.39■□□□□ 0.69
XRN1Q8IZH2 URB1-AS1-201ENST00000534991 831 ntBASIC19.39■□□□□ 0.69
XRN1Q8IZH2 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC19.39■□□□□ 0.69
XRN1Q8IZH2 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC19.39■□□□□ 0.69
XRN1Q8IZH2 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.39■□□□□ 0.69
XRN1Q8IZH2 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC19.39■□□□□ 0.69
XRN1Q8IZH2 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC19.39■□□□□ 0.69
XRN1Q8IZH2 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms