Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC19.6■□□□□ 0.73
CGNL1Q0VF96 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC19.6■□□□□ 0.73
CGNL1Q0VF96 RN7SL555P-201ENST00000584742 339 ntBASIC19.6■□□□□ 0.73
CGNL1Q0VF96 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC19.6■□□□□ 0.73
CGNL1Q0VF96 COX6A1P2-201ENST00000620597 330 ntBASIC19.6■□□□□ 0.73
CGNL1Q0VF96 AC051619.9-201ENST00000623237 597 ntBASIC19.6■□□□□ 0.73
CGNL1Q0VF96 CCT8L1P-201ENST00000465400 1674 ntBASIC19.6■□□□□ 0.73
CGNL1Q0VF96 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CGNL1Q0VF96 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CGNL1Q0VF96 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CGNL1Q0VF96 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC19.6■□□□□ 0.73
CGNL1Q0VF96 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CGNL1Q0VF96 AC007191.1-201ENST00000623179 2995 ntBASIC19.6■□□□□ 0.73
CGNL1Q0VF96 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CGNL1Q0VF96 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC19.6■□□□□ 0.73
CGNL1Q0VF96 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CGNL1Q0VF96 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CGNL1Q0VF96 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CGNL1Q0VF96 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC19.6■□□□□ 0.73
CGNL1Q0VF96 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CGNL1Q0VF96 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CGNL1Q0VF96 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC19.59■□□□□ 0.73
CGNL1Q0VF96 AC097359.2-201ENST00000604992 2389 ntBASIC19.59■□□□□ 0.73
CGNL1Q0VF96 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC19.59■□□□□ 0.73
CGNL1Q0VF96 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CGNL1Q0VF96 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
CGNL1Q0VF96 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CGNL1Q0VF96 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CGNL1Q0VF96 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CGNL1Q0VF96 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CGNL1Q0VF96 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CGNL1Q0VF96 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CGNL1Q0VF96 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CGNL1Q0VF96 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC19.59■□□□□ 0.73
CGNL1Q0VF96 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CGNL1Q0VF96 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC19.59■□□□□ 0.73
CGNL1Q0VF96 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC19.59■□□□□ 0.73
CGNL1Q0VF96 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CGNL1Q0VF96 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CGNL1Q0VF96 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CGNL1Q0VF96 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC19.59■□□□□ 0.73
CGNL1Q0VF96 AP003419.4-201ENST00000616071 517 ntBASIC19.59■□□□□ 0.73
CGNL1Q0VF96 AC007718.1-201ENST00000621078 280 ntBASIC19.59■□□□□ 0.73
CGNL1Q0VF96 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
CGNL1Q0VF96 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC19.59■□□□□ 0.73
CGNL1Q0VF96 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CGNL1Q0VF96 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC19.59■□□□□ 0.73
CGNL1Q0VF96 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CGNL1Q0VF96 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CGNL1Q0VF96 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CGNL1Q0VF96 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CGNL1Q0VF96 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CGNL1Q0VF96 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC19.59■□□□□ 0.73
CGNL1Q0VF96 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CGNL1Q0VF96 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CGNL1Q0VF96 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC19.59■□□□□ 0.73
CGNL1Q0VF96 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CGNL1Q0VF96 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CGNL1Q0VF96 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CGNL1Q0VF96 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC19.58■□□□□ 0.73
CGNL1Q0VF96 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CGNL1Q0VF96 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CGNL1Q0VF96 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CGNL1Q0VF96 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
CGNL1Q0VF96 BRD7P5-201ENST00000299197 1822 ntBASIC19.58■□□□□ 0.73
CGNL1Q0VF96 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CGNL1Q0VF96 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
CGNL1Q0VF96 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.73
CGNL1Q0VF96 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CGNL1Q0VF96 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC19.58■□□□□ 0.73
CGNL1Q0VF96 DUTP3-201ENST00000450025 415 ntBASIC19.58■□□□□ 0.73
CGNL1Q0VF96 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CGNL1Q0VF96 MBP-227ENST00000526111 581 ntTSL 4 BASIC19.58■□□□□ 0.73
CGNL1Q0VF96 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC19.58■□□□□ 0.73
CGNL1Q0VF96 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC19.58■□□□□ 0.73
CGNL1Q0VF96 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC19.58■□□□□ 0.73
CGNL1Q0VF96 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
CGNL1Q0VF96 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CGNL1Q0VF96 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC19.58■□□□□ 0.73
CGNL1Q0VF96 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CGNL1Q0VF96 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CGNL1Q0VF96 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CGNL1Q0VF96 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CGNL1Q0VF96 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CGNL1Q0VF96 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CGNL1Q0VF96 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CGNL1Q0VF96 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
CGNL1Q0VF96 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CGNL1Q0VF96 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CGNL1Q0VF96 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC19.58■□□□□ 0.72
CGNL1Q0VF96 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CGNL1Q0VF96 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC19.58■□□□□ 0.72
CGNL1Q0VF96 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CGNL1Q0VF96 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC19.58■□□□□ 0.72
CGNL1Q0VF96 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CGNL1Q0VF96 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CGNL1Q0VF96 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CGNL1Q0VF96 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CGNL1Q0VF96 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CGNL1Q0VF96 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms