Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDR1Q08345 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDR1Q08345 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.71■□□□□ 0.43
DDR1Q08345 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDR1Q08345 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDR1Q08345 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.71■□□□□ 0.43
DDR1Q08345 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC17.71■□□□□ 0.43
DDR1Q08345 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
DDR1Q08345 AC215219.1-201ENST00000400706 1817 ntBASIC17.71■□□□□ 0.43
DDR1Q08345 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC17.71■□□□□ 0.43
DDR1Q08345 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDR1Q08345 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
DDR1Q08345 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDR1Q08345 FAM21EP-201ENST00000417804 985 ntBASIC17.71■□□□□ 0.43
DDR1Q08345 AC104961.1-201ENST00000427605 771 ntBASIC17.71■□□□□ 0.43
DDR1Q08345 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC17.71■□□□□ 0.43
DDR1Q08345 KRT18P62-201ENST00000446618 1287 ntBASIC17.71■□□□□ 0.43
DDR1Q08345 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC17.71■□□□□ 0.43
DDR1Q08345 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC17.71■□□□□ 0.43
DDR1Q08345 SLC25A15P3-201ENST00000505530 290 ntBASIC17.71■□□□□ 0.43
DDR1Q08345 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
DDR1Q08345 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC17.71■□□□□ 0.43
DDR1Q08345 IGHEP1-201ENST00000521393 651 ntBASIC17.71■□□□□ 0.43
DDR1Q08345 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
DDR1Q08345 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
DDR1Q08345 AL590235.1-201ENST00000564650 861 ntBASIC17.71■□□□□ 0.43
DDR1Q08345 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
DDR1Q08345 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC17.71■□□□□ 0.43
DDR1Q08345 AC005274.1-201ENST00000623460 802 ntBASIC17.71■□□□□ 0.43
DDR1Q08345 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
DDR1Q08345 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDR1Q08345 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDR1Q08345 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDR1Q08345 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDR1Q08345 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDR1Q08345 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDR1Q08345 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17.71■□□□□ 0.43
DDR1Q08345 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
DDR1Q08345 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.7■□□□□ 0.42
DDR1Q08345 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
DDR1Q08345 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DDR1Q08345 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.7■□□□□ 0.42
DDR1Q08345 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.7■□□□□ 0.42
DDR1Q08345 LINC02228-204ENST00000642115 2962 ntBASIC17.7■□□□□ 0.42
DDR1Q08345 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDR1Q08345 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDR1Q08345 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DDR1Q08345 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DDR1Q08345 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.7■□□□□ 0.42
DDR1Q08345 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDR1Q08345 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDR1Q08345 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DDR1Q08345 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DDR1Q08345 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.7■□□□□ 0.42
DDR1Q08345 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
DDR1Q08345 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
DDR1Q08345 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDR1Q08345 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DDR1Q08345 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
DDR1Q08345 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC17.7■□□□□ 0.42
DDR1Q08345 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC17.7■□□□□ 0.42
DDR1Q08345 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC17.7■□□□□ 0.42
DDR1Q08345 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC17.7■□□□□ 0.42
DDR1Q08345 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
DDR1Q08345 RN7SL128P-201ENST00000467883 305 ntBASIC17.7■□□□□ 0.42
DDR1Q08345 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDR1Q08345 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDR1Q08345 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC17.7■□□□□ 0.42
DDR1Q08345 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC17.7■□□□□ 0.42
DDR1Q08345 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC17.7■□□□□ 0.42
DDR1Q08345 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC17.7■□□□□ 0.42
DDR1Q08345 PTPN20CP-201ENST00000614090 920 ntBASIC17.7■□□□□ 0.42
DDR1Q08345 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC17.7■□□□□ 0.42
DDR1Q08345 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC17.7■□□□□ 0.42
DDR1Q08345 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDR1Q08345 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC17.7■□□□□ 0.42
DDR1Q08345 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC17.7■□□□□ 0.42
DDR1Q08345 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC17.7■□□□□ 0.42
DDR1Q08345 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.7■□□□□ 0.42
DDR1Q08345 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC17.7■□□□□ 0.42
DDR1Q08345 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDR1Q08345 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDR1Q08345 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDR1Q08345 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDR1Q08345 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
DDR1Q08345 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDR1Q08345 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
DDR1Q08345 AC064801.2-201ENST00000625052 1303 ntBASIC17.7■□□□□ 0.42
DDR1Q08345 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC17.7■□□□□ 0.42
DDR1Q08345 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
DDR1Q08345 PPT1-215ENST00000641471 2368 ntBASIC17.69■□□□□ 0.42
DDR1Q08345 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDR1Q08345 MYADML-201ENST00000474610 2147 ntBASIC17.69■□□□□ 0.42
DDR1Q08345 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDR1Q08345 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.69■□□□□ 0.42
DDR1Q08345 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.69■□□□□ 0.42
DDR1Q08345 TCAF2P1-201ENST00000291129 2421 ntBASIC17.69■□□□□ 0.42
DDR1Q08345 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC17.69■□□□□ 0.42
DDR1Q08345 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDR1Q08345 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms