Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL16A1Q07092 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC18.73■□□□□ 0.59
COL16A1Q07092 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL16A1Q07092 SPC25-201ENST00000282074 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL16A1Q07092 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
COL16A1Q07092 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL16A1Q07092 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL16A1Q07092 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL16A1Q07092 TCAF2P1-201ENST00000291129 2421 ntBASIC18.72■□□□□ 0.59
COL16A1Q07092 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL16A1Q07092 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.72■□□□□ 0.59
COL16A1Q07092 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC18.72■□□□□ 0.59
COL16A1Q07092 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC18.72■□□□□ 0.59
COL16A1Q07092 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC18.72■□□□□ 0.59
COL16A1Q07092 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL16A1Q07092 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.72■□□□□ 0.59
COL16A1Q07092 MYADML-201ENST00000474610 2147 ntBASIC18.72■□□□□ 0.59
COL16A1Q07092 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
COL16A1Q07092 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
COL16A1Q07092 MB-204ENST00000401702 1043 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COL16A1Q07092 AC005011.1-201ENST00000455206 210 ntBASIC18.72■□□□□ 0.59
COL16A1Q07092 AC105424.1-201ENST00000514583 209 ntBASIC18.72■□□□□ 0.59
COL16A1Q07092 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC18.72■□□□□ 0.59
COL16A1Q07092 KCNE3-202ENST00000525550 935 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL16A1Q07092 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC18.72■□□□□ 0.59
COL16A1Q07092 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL16A1Q07092 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
COL16A1Q07092 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL16A1Q07092 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COL16A1Q07092 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL16A1Q07092 TUBA3GP-201ENST00000410028 1325 ntBASIC18.72■□□□□ 0.59
COL16A1Q07092 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL16A1Q07092 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL16A1Q07092 NME1-209ENST00000511355 1645 ntTSL 5 BASIC18.71■□□□□ 0.59
COL16A1Q07092 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COL16A1Q07092 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COL16A1Q07092 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL16A1Q07092 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
COL16A1Q07092 AC000078.1-201ENST00000420617 682 ntBASIC18.71■□□□□ 0.59
COL16A1Q07092 HNRNPA1P3-201ENST00000440968 551 ntBASIC18.71■□□□□ 0.59
COL16A1Q07092 RPL3P9-201ENST00000463217 1183 ntBASIC18.71■□□□□ 0.59
COL16A1Q07092 OR2A1-AS1-203ENST00000468575 568 ntBASIC18.71■□□□□ 0.59
COL16A1Q07092 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC18.71■□□□□ 0.59
COL16A1Q07092 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC18.71■□□□□ 0.59
COL16A1Q07092 MIR4326-201ENST00000582203 59 ntBASIC18.71■□□□□ 0.59
COL16A1Q07092 AC010319.4-201ENST00000593957 691 ntTSL 3 BASIC18.71■□□□□ 0.59
COL16A1Q07092 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COL16A1Q07092 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL16A1Q07092 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COL16A1Q07092 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC18.71■□□□□ 0.59
COL16A1Q07092 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC18.71■□□□□ 0.59
COL16A1Q07092 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC18.71■□□□□ 0.59
COL16A1Q07092 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL16A1Q07092 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL16A1Q07092 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COL16A1Q07092 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
COL16A1Q07092 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
COL16A1Q07092 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL16A1Q07092 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COL16A1Q07092 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
COL16A1Q07092 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COL16A1Q07092 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC18.71■□□□□ 0.59
COL16A1Q07092 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
COL16A1Q07092 AC012158.1-201ENST00000535684 1366 ntTSL 2 BASIC18.71■□□□□ 0.58
COL16A1Q07092 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
COL16A1Q07092 AC006001.2-202ENST00000439360 508 ntTSL 3 BASIC18.71■□□□□ 0.58
COL16A1Q07092 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC18.71■□□□□ 0.58
COL16A1Q07092 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC18.71■□□□□ 0.58
COL16A1Q07092 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC18.71■□□□□ 0.58
COL16A1Q07092 AC008808.2-201ENST00000510349 569 ntTSL 3 BASIC18.71■□□□□ 0.58
COL16A1Q07092 AC112694.1-202ENST00000540985 943 ntBASIC18.71■□□□□ 0.58
COL16A1Q07092 TTC39A-AS1-201ENST00000564479 812 ntTSL 3 BASIC18.71■□□□□ 0.58
COL16A1Q07092 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC18.71■□□□□ 0.58
COL16A1Q07092 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC18.71■□□□□ 0.58
COL16A1Q07092 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COL16A1Q07092 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.7■□□□□ 0.58
COL16A1Q07092 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL16A1Q07092 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC18.7■□□□□ 0.58
COL16A1Q07092 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
COL16A1Q07092 AC015813.5-201ENST00000624641 1514 ntBASIC18.7■□□□□ 0.58
COL16A1Q07092 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL16A1Q07092 PIN4-203ENST00000373669 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL16A1Q07092 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
COL16A1Q07092 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COL16A1Q07092 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
COL16A1Q07092 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC18.7■□□□□ 0.58
COL16A1Q07092 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL16A1Q07092 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.7■□□□□ 0.58
COL16A1Q07092 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL16A1Q07092 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL16A1Q07092 AC215219.1-201ENST00000400706 1817 ntBASIC18.7■□□□□ 0.58
COL16A1Q07092 HIGD2B-201ENST00000311755 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL16A1Q07092 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
COL16A1Q07092 AC138392.1-201ENST00000427577 921 ntBASIC18.7■□□□□ 0.58
COL16A1Q07092 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL16A1Q07092 RPSAP16-201ENST00000447583 821 ntBASIC18.7■□□□□ 0.58
COL16A1Q07092 RN7SL638P-201ENST00000494527 290 ntBASIC18.7■□□□□ 0.58
COL16A1Q07092 AC114812.4-201ENST00000506676 757 ntBASIC18.7■□□□□ 0.58
COL16A1Q07092 AC133555.4-201ENST00000569081 152 ntBASIC18.7■□□□□ 0.58
COL16A1Q07092 CLDN6-203ENST00000572154 461 ntTSL 3 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms