RNA–Protein interactions for RNA: ENST00000494527.3

RN7SL638P-201, Transcript of RNA, 7SL, cytoplasmic 638, pseudogene, humanhuman

BASIC

Gene RN7SL638P, Length 290 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL638P-201ENST00000494527 NISCHQ9Y2I1 1504 aa31.24■■■□□ 2.59
RN7SL638P-201ENST00000494527 CCDC180Q9P1Z9 1646 aa27.89■■■□□ 2.05
RN7SL638P-201ENST00000494527 ABCC9O60706 1549 aa27.71■■■□□ 2.03
RN7SL638P-201ENST00000494527 RB1CC1Q8TDY2 1594 aa26.43■■□□□ 1.82
RN7SL638P-201ENST00000494527 DCAF8L2P0C7V8 631 aa26.38■■□□□ 1.81
RN7SL638P-201ENST00000494527 NACADO15069 1562 aa26.29■■□□□ 1.8
RN7SL638P-201ENST00000494527 MYO15BQ96JP2 1530 aa25.96■■□□□ 1.75
RN7SL638P-201ENST00000494527 ZCCHC6Q5VYS8 1495 aaKnown RBP25.96■■□□□ 1.75
RN7SL638P-201ENST00000494527 PABPN1Q86U42 306 aaKnown RBP eCLIP25.85■■□□□ 1.73
RN7SL638P-201ENST00000494527 UNC13AQ9UPW8 1703 aa25.83■■□□□ 1.73
RN7SL638P-201ENST00000494527 DCAF1Q9Y4B6 1507 aa25.75■■□□□ 1.71
RN7SL638P-201ENST00000494527 DNAJC5BQ9UF47 199 aa25.66■■□□□ 1.7
RN7SL638P-201ENST00000494527 BICRAQ9NZM4 1560 aa25.63■■□□□ 1.69
RN7SL638P-201ENST00000494527 SCRIBQ14160 1630 aa25.55■■□□□ 1.68
RN7SL638P-201ENST00000494527 SHROOM4Q9ULL8 1493 aa25.26■■□□□ 1.63
RN7SL638P-201ENST00000494527 EIF4G1Q04637 1599 aaKnown RBP25■■□□□ 1.59
RN7SL638P-201ENST00000494527 CC2D2AQ9P2K1 1620 aa24.99■■□□□ 1.59
RN7SL638P-201ENST00000494527 CECR2Q9BXF3 1484 aa24.89■■□□□ 1.58
RN7SL638P-201ENST00000494527 SMARCA4P51532 1647 aa24.33■■□□□ 1.49
RN7SL638P-201ENST00000494527 ATAD2BQ9ULI0 1458 aa24.26■■□□□ 1.47
RN7SL638P-201ENST00000494527 NCAPD3P42695 1498 aa24.25■■□□□ 1.47
RN7SL638P-201ENST00000494527 BAZ1AQ9NRL2 1556 aaPredicted RBP24.24■■□□□ 1.47
RN7SL638P-201ENST00000494527 SMARCA2P51531 1590 aa24.21■■□□□ 1.47
RN7SL638P-201ENST00000494527 HMGXB3Q12766 1538 aa24.12■■□□□ 1.45
RN7SL638P-201ENST00000494527 MROH2BQ7Z745 1585 aa24.12■■□□□ 1.45
RN7SL638P-201ENST00000494527 BAZ1BQ9UIG0 1483 aaKnown RBP24.08■■□□□ 1.45
RN7SL638P-201ENST00000494527 PEG3Q9GZU2 1588 aa24.01■■□□□ 1.43
RN7SL638P-201ENST00000494527 ERCC6Q03468 1493 aa23.91■■□□□ 1.42
RN7SL638P-201ENST00000494527 NESP48681 1621 aa23.88■■□□□ 1.41
RN7SL638P-201ENST00000494527 WIZO95785 1651 aa23.85■■□□□ 1.41
RN7SL638P-201ENST00000494527 RSF1Q96T23 1441 aaPredicted RBP23.7■■□□□ 1.38
RN7SL638P-201ENST00000494527 LAMC3Q9Y6N6 1575 aa23.68■■□□□ 1.38
RN7SL638P-201ENST00000494527 CUX2O14529 1486 aa23.68■■□□□ 1.38
RN7SL638P-201ENST00000494527 CADPSQ9ULU8 1353 aa23.56■■□□□ 1.36
RN7SL638P-201ENST00000494527 KIF21AQ7Z4S6 1674 aa23.56■■□□□ 1.36
RN7SL638P-201ENST00000494527 PDS5BQ9NTI5 1447 aa23.56■■□□□ 1.36
RN7SL638P-201ENST00000494527 TOP2AP11388 1531 aaKnown RBP23.55■■□□□ 1.36
RN7SL638P-201ENST00000494527 THOC2Q8NI27 1593 aaKnown RBP23.53■■□□□ 1.36
RN7SL638P-201ENST00000494527 MRC2Q9UBG0 1479 aa23.36■■□□□ 1.33
RN7SL638P-201ENST00000494527 CFTRP13569 1480 aa23.34■■□□□ 1.33
RN7SL638P-201ENST00000494527 CEP164Q9UPV0 1460 aa23.34■■□□□ 1.33
RN7SL638P-201ENST00000494527 FANCD2Q9BXW9 1451 aa23.33■■□□□ 1.33
RN7SL638P-201ENST00000494527 DNAJC5Q9H3Z4 198 aa23.31■■□□□ 1.32
RN7SL638P-201ENST00000494527 CCDC88BA6NC98 1476 aa23.28■■□□□ 1.32
RN7SL638P-201ENST00000494527 WDR62O43379 1518 aa23.26■■□□□ 1.31
RN7SL638P-201ENST00000494527 PRDM2Q13029 1718 aa23.16■■□□□ 1.3
RN7SL638P-201ENST00000494527 URB2Q14146 1524 aaKnown RBP23.12■■□□□ 1.29
RN7SL638P-201ENST00000494527 SUPT5HO00267 1087 aaKnown RBP22.99■■□□□ 1.27
RN7SL638P-201ENST00000494527 TOPBP1Q92547 1522 aa22.92■■□□□ 1.26
RN7SL638P-201ENST00000494527 DNMBPQ6XZF7 1577 aa22.86■■□□□ 1.25
RN7SL638P-201ENST00000494527 IFT140Q96RY7 1462 aa22.84■■□□□ 1.25
RN7SL638P-201ENST00000494527 ABCC8Q09428 1581 aa22.83■■□□□ 1.25
RN7SL638P-201ENST00000494527 ZNF608Q9ULD9 1512 aaPredicted RBP22.81■■□□□ 1.24
RN7SL638P-201ENST00000494527 POLA1P09884 1462 aaPredicted RBP22.7■■□□□ 1.22
RN7SL638P-201ENST00000494527 EIF4G3O43432 1585 aaKnown RBP22.69■■□□□ 1.22
RN7SL638P-201ENST00000494527 OSCARQ8IYS5 282 aa22.66■■□□□ 1.22
RN7SL638P-201ENST00000494527 TARBP1Q13395 1621 aaKnown RBP22.66■■□□□ 1.22
RN7SL638P-201ENST00000494527 RAD54L2Q9Y4B4 1467 aa22.65■■□□□ 1.22
RN7SL638P-201ENST00000494527 CUX1P39880 1505 aa22.64■■□□□ 1.21
RN7SL638P-201ENST00000494527 AQRO60306 1485 aaKnown RBP eCLIP22.63■■□□□ 1.21
RN7SL638P-201ENST00000494527 FGD5Q6ZNL6 1462 aa22.62■■□□□ 1.21
RN7SL638P-201ENST00000494527 SOGA1O94964 1423 aa22.61■■□□□ 1.21
RN7SL638P-201ENST00000494527 TRIM41Q8WV44 630 aa22.56■■□□□ 1.2
RN7SL638P-201ENST00000494527 TDRD9Q8NDG6 1382 aaKnown RBP22.55■■□□□ 1.2
RN7SL638P-201ENST00000494527 FBLN2P98095 1184 aa22.49■■□□□ 1.19
RN7SL638P-201ENST00000494527 CHD1O14646 1710 aa22.48■■□□□ 1.19
RN7SL638P-201ENST00000494527 SNAPC4Q5SXM2 1469 aa22.43■■□□□ 1.18
RN7SL638P-201ENST00000494527 WDR97A6NE52 1622 aa22.41■■□□□ 1.18
RN7SL638P-201ENST00000494527 WRNQ14191 1432 aaPredicted RBP eCLIP22.38■■□□□ 1.17
RN7SL638P-201ENST00000494527 GRIN2BQ13224 1484 aa22.37■■□□□ 1.17
RN7SL638P-201ENST00000494527 RIMBP3CA6NJZ7 1639 aa22.36■■□□□ 1.17
RN7SL638P-201ENST00000494527 RIMBP3BA6NNM3 1639 aa22.36■■□□□ 1.17
RN7SL638P-201ENST00000494527 RIMBP3Q9UFD9 1639 aa22.36■■□□□ 1.17
RN7SL638P-201ENST00000494527 SYNJ1O43426 1573 aa22.35■■□□□ 1.17
RN7SL638P-201ENST00000494527 ABCA10Q8WWZ4 1543 aa22.35■■□□□ 1.17
RN7SL638P-201ENST00000494527 GAPVD1Q14C86 1478 aa22.34■■□□□ 1.17
RN7SL638P-201ENST00000494527 TOP2BQ02880 1626 aa22.33■■□□□ 1.17
RN7SL638P-201ENST00000494527 BIVM-ERCC5R4GMW8 1640 aa22.33■■□□□ 1.17
RN7SL638P-201ENST00000494527 MAGI1Q96QZ7 1491 aaPredicted RBP22.33■■□□□ 1.16
RN7SL638P-201ENST00000494527 PBRM1Q86U86 1689 aa22.33■■□□□ 1.16
RN7SL638P-201ENST00000494527 ARHGEF11O15085 1522 aa22.32■■□□□ 1.16
RN7SL638P-201ENST00000494527 CHMP7Q8WUX9 453 aaPredicted RBP22.32■■□□□ 1.16
RN7SL638P-201ENST00000494527 ABCA5Q8WWZ7 1642 aa22.29■■□□□ 1.16
RN7SL638P-201ENST00000494527 SYNJ2O15056 1496 aa22.26■■□□□ 1.15
RN7SL638P-201ENST00000494527 CLASP1Q7Z460 1538 aa22.18■■□□□ 1.14
RN7SL638P-201ENST00000494527 CYB5RLQ6IPT4 315 aa22.16■■□□□ 1.14
RN7SL638P-201ENST00000494527 ADAMTS12P58397 1594 aa22.13■■□□□ 1.13
RN7SL638P-201ENST00000494527 ARAP1Q96P48 1450 aa22.13■■□□□ 1.13
RN7SL638P-201ENST00000494527 GRIN2AQ12879 1464 aa22.09■■□□□ 1.13
RN7SL638P-201ENST00000494527 ERICH3Q5RHP9 1530 aa22.06■■□□□ 1.12
RN7SL638P-201ENST00000494527 FHAD1B1AJZ9 1412 aa22.06■■□□□ 1.12
RN7SL638P-201ENST00000494527 CEP170Q5SW79 1584 aa22.01■■□□□ 1.11
RN7SL638P-201ENST00000494527 NUP160Q12769 1436 aa21.97■■□□□ 1.11
RN7SL638P-201ENST00000494527 KIF27Q86VH2 1401 aa21.92■■□□□ 1.1
RN7SL638P-201ENST00000494527 ERCC6L2Q5T890 1561 aa21.91■■□□□ 1.1
RN7SL638P-201ENST00000494527 TRHP20396 242 aaPredicted RBP21.86■■□□□ 1.09
RN7SL638P-201ENST00000494527 IGF1RP08069 1367 aa21.85■■□□□ 1.09
RN7SL638P-201ENST00000494527 SHROOM2Q13796 1616 aa21.84■■□□□ 1.09
RN7SL638P-201ENST00000494527 CUL7Q14999 1698 aa21.82■■□□□ 1.08
RN7SL638P-201ENST00000494527 RUSC2Q8N2Y8 1516 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms