RNA–Protein interactions for RNA: ENST00000410028.3

TUBA3GP-201, Transcript of tubulin alpha 3g pseudogene, humanhuman

BASIC

Gene TUBA3GP, Length 1,325 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3GP-201ENST00000410028 NISCHQ9Y2I1 1504 aa31.08■■■□□ 2.57
TUBA3GP-201ENST00000410028 CCDC180Q9P1Z9 1646 aa27.83■■■□□ 2.05
TUBA3GP-201ENST00000410028 ABCC9O60706 1549 aa27.79■■■□□ 2.04
TUBA3GP-201ENST00000410028 RB1CC1Q8TDY2 1594 aa26.45■■□□□ 1.83
TUBA3GP-201ENST00000410028 NACADO15069 1562 aa26.3■■□□□ 1.8
TUBA3GP-201ENST00000410028 DCAF8L2P0C7V8 631 aa26.14■■□□□ 1.77
TUBA3GP-201ENST00000410028 DNAJC5BQ9UF47 199 aa26.11■■□□□ 1.77
TUBA3GP-201ENST00000410028 MYO15BQ96JP2 1530 aa26.01■■□□□ 1.75
TUBA3GP-201ENST00000410028 PABPN1Q86U42 306 aaKnown RBP eCLIP25.81■■□□□ 1.72
TUBA3GP-201ENST00000410028 UNC13AQ9UPW8 1703 aa25.79■■□□□ 1.72
TUBA3GP-201ENST00000410028 ZCCHC6Q5VYS8 1495 aaKnown RBP25.79■■□□□ 1.72
TUBA3GP-201ENST00000410028 DCAF1Q9Y4B6 1507 aa25.71■■□□□ 1.71
TUBA3GP-201ENST00000410028 BICRAQ9NZM4 1560 aa25.64■■□□□ 1.7
TUBA3GP-201ENST00000410028 SHROOM4Q9ULL8 1493 aa25.39■■□□□ 1.65
TUBA3GP-201ENST00000410028 SCRIBQ14160 1630 aa25.34■■□□□ 1.65
TUBA3GP-201ENST00000410028 CC2D2AQ9P2K1 1620 aa25.1■■□□□ 1.61
TUBA3GP-201ENST00000410028 CECR2Q9BXF3 1484 aa25.09■■□□□ 1.61
TUBA3GP-201ENST00000410028 EIF4G1Q04637 1599 aaKnown RBP25.02■■□□□ 1.6
TUBA3GP-201ENST00000410028 NCAPD3P42695 1498 aa24.29■■□□□ 1.48
TUBA3GP-201ENST00000410028 DNAJC5Q9H3Z4 198 aa24.22■■□□□ 1.47
TUBA3GP-201ENST00000410028 ATAD2BQ9ULI0 1458 aa24.21■■□□□ 1.47
TUBA3GP-201ENST00000410028 SMARCA4P51532 1647 aa24.21■■□□□ 1.47
TUBA3GP-201ENST00000410028 SMARCA2P51531 1590 aa24.16■■□□□ 1.46
TUBA3GP-201ENST00000410028 BAZ1AQ9NRL2 1556 aaPredicted RBP24.12■■□□□ 1.45
TUBA3GP-201ENST00000410028 HMGXB3Q12766 1538 aa24.11■■□□□ 1.45
TUBA3GP-201ENST00000410028 CUX2O14529 1486 aa24.11■■□□□ 1.45
TUBA3GP-201ENST00000410028 ERCC6Q03468 1493 aa24.1■■□□□ 1.45
TUBA3GP-201ENST00000410028 PEG3Q9GZU2 1588 aa24■■□□□ 1.43
TUBA3GP-201ENST00000410028 BAZ1BQ9UIG0 1483 aaKnown RBP23.98■■□□□ 1.43
TUBA3GP-201ENST00000410028 MROH2BQ7Z745 1585 aa23.92■■□□□ 1.42
TUBA3GP-201ENST00000410028 NESP48681 1621 aa23.82■■□□□ 1.4
TUBA3GP-201ENST00000410028 LAMC3Q9Y6N6 1575 aa23.71■■□□□ 1.39
TUBA3GP-201ENST00000410028 WIZO95785 1651 aa23.63■■□□□ 1.37
TUBA3GP-201ENST00000410028 THOC2Q8NI27 1593 aaKnown RBP23.63■■□□□ 1.37
TUBA3GP-201ENST00000410028 PDS5BQ9NTI5 1447 aa23.58■■□□□ 1.37
TUBA3GP-201ENST00000410028 CADPSQ9ULU8 1353 aa23.55■■□□□ 1.36
TUBA3GP-201ENST00000410028 KIF21AQ7Z4S6 1674 aa23.51■■□□□ 1.35
TUBA3GP-201ENST00000410028 RSF1Q96T23 1441 aaPredicted RBP23.5■■□□□ 1.35
TUBA3GP-201ENST00000410028 TOP2AP11388 1531 aaKnown RBP23.37■■□□□ 1.33
TUBA3GP-201ENST00000410028 MRC2Q9UBG0 1479 aa23.36■■□□□ 1.33
TUBA3GP-201ENST00000410028 CFTRP13569 1480 aa23.31■■□□□ 1.32
TUBA3GP-201ENST00000410028 WDR62O43379 1518 aa23.29■■□□□ 1.32
TUBA3GP-201ENST00000410028 CEP164Q9UPV0 1460 aa23.28■■□□□ 1.32
TUBA3GP-201ENST00000410028 FANCD2Q9BXW9 1451 aa23.27■■□□□ 1.32
TUBA3GP-201ENST00000410028 TRIM41Q8WV44 630 aa23.1■■□□□ 1.29
TUBA3GP-201ENST00000410028 CCDC88BA6NC98 1476 aa23.1■■□□□ 1.29
TUBA3GP-201ENST00000410028 URB2Q14146 1524 aaKnown RBP23.06■■□□□ 1.28
TUBA3GP-201ENST00000410028 PRDM2Q13029 1718 aa23.04■■□□□ 1.28
TUBA3GP-201ENST00000410028 OSCARQ8IYS5 282 aa22.95■■□□□ 1.26
TUBA3GP-201ENST00000410028 TOPBP1Q92547 1522 aa22.83■■□□□ 1.25
TUBA3GP-201ENST00000410028 IFT140Q96RY7 1462 aa22.82■■□□□ 1.24
TUBA3GP-201ENST00000410028 ABCC8Q09428 1581 aa22.82■■□□□ 1.24
TUBA3GP-201ENST00000410028 DNMBPQ6XZF7 1577 aa22.76■■□□□ 1.23
TUBA3GP-201ENST00000410028 ZNF608Q9ULD9 1512 aaPredicted RBP22.74■■□□□ 1.23
TUBA3GP-201ENST00000410028 RIMBP3CA6NJZ7 1639 aa22.64■■□□□ 1.21
TUBA3GP-201ENST00000410028 RIMBP3BA6NNM3 1639 aa22.64■■□□□ 1.21
TUBA3GP-201ENST00000410028 RIMBP3Q9UFD9 1639 aa22.64■■□□□ 1.21
TUBA3GP-201ENST00000410028 EIF4G3O43432 1585 aaKnown RBP22.63■■□□□ 1.21
TUBA3GP-201ENST00000410028 TARBP1Q13395 1621 aaKnown RBP22.62■■□□□ 1.21
TUBA3GP-201ENST00000410028 POLA1P09884 1462 aaPredicted RBP22.62■■□□□ 1.21
TUBA3GP-201ENST00000410028 ARHGEF11O15085 1522 aa22.56■■□□□ 1.2
TUBA3GP-201ENST00000410028 AQRO60306 1485 aaKnown RBP eCLIP22.56■■□□□ 1.2
TUBA3GP-201ENST00000410028 SOGA1O94964 1423 aa22.51■■□□□ 1.19
TUBA3GP-201ENST00000410028 RAD54L2Q9Y4B4 1467 aa22.51■■□□□ 1.19
TUBA3GP-201ENST00000410028 SUPT5HO00267 1087 aaKnown RBP22.51■■□□□ 1.19
TUBA3GP-201ENST00000410028 FGD5Q6ZNL6 1462 aa22.48■■□□□ 1.19
TUBA3GP-201ENST00000410028 CUX1P39880 1505 aa22.47■■□□□ 1.19
TUBA3GP-201ENST00000410028 CHD1O14646 1710 aa22.45■■□□□ 1.19
TUBA3GP-201ENST00000410028 TDRD9Q8NDG6 1382 aaKnown RBP22.44■■□□□ 1.18
TUBA3GP-201ENST00000410028 WDR97A6NE52 1622 aa22.44■■□□□ 1.18
TUBA3GP-201ENST00000410028 FBLN2P98095 1184 aa22.41■■□□□ 1.18
TUBA3GP-201ENST00000410028 CYB5RLQ6IPT4 315 aa22.39■■□□□ 1.18
TUBA3GP-201ENST00000410028 SNAPC4Q5SXM2 1469 aa22.33■■□□□ 1.17
TUBA3GP-201ENST00000410028 GRIN2BQ13224 1484 aa22.32■■□□□ 1.16
TUBA3GP-201ENST00000410028 MAGI1Q96QZ7 1491 aaPredicted RBP22.31■■□□□ 1.16
TUBA3GP-201ENST00000410028 ARAP1Q96P48 1450 aa22.3■■□□□ 1.16
TUBA3GP-201ENST00000410028 CHMP7Q8WUX9 453 aaPredicted RBP22.26■■□□□ 1.15
TUBA3GP-201ENST00000410028 ABCA10Q8WWZ4 1543 aa22.25■■□□□ 1.15
TUBA3GP-201ENST00000410028 TRHP20396 242 aaPredicted RBP22.25■■□□□ 1.15
TUBA3GP-201ENST00000410028 GAPVD1Q14C86 1478 aa22.24■■□□□ 1.15
TUBA3GP-201ENST00000410028 SYNJ2O15056 1496 aa22.23■■□□□ 1.15
TUBA3GP-201ENST00000410028 SYNJ1O43426 1573 aa22.23■■□□□ 1.15
TUBA3GP-201ENST00000410028 CLASP1Q7Z460 1538 aa22.2■■□□□ 1.14
TUBA3GP-201ENST00000410028 WRNQ14191 1432 aaPredicted RBP eCLIP22.2■■□□□ 1.14
TUBA3GP-201ENST00000410028 PBRM1Q86U86 1689 aa22.19■■□□□ 1.14
TUBA3GP-201ENST00000410028 ABCA5Q8WWZ7 1642 aa22.19■■□□□ 1.14
TUBA3GP-201ENST00000410028 TOP2BQ02880 1626 aa22.17■■□□□ 1.14
TUBA3GP-201ENST00000410028 BIVM-ERCC5R4GMW8 1640 aa22.15■■□□□ 1.14
TUBA3GP-201ENST00000410028 GRIN2AQ12879 1464 aa22.03■■□□□ 1.12
TUBA3GP-201ENST00000410028 ADAMTS12P58397 1594 aa22.01■■□□□ 1.11
TUBA3GP-201ENST00000410028 FHAD1B1AJZ9 1412 aa21.98■■□□□ 1.11
TUBA3GP-201ENST00000410028 ERICH3Q5RHP9 1530 aa21.98■■□□□ 1.11
TUBA3GP-201ENST00000410028 NUP160Q12769 1436 aa21.95■■□□□ 1.11
TUBA3GP-201ENST00000410028 CEP170Q5SW79 1584 aa21.92■■□□□ 1.1
TUBA3GP-201ENST00000410028 SHROOM2Q13796 1616 aa21.83■■□□□ 1.08
TUBA3GP-201ENST00000410028 ERCC6L2Q5T890 1561 aa21.83■■□□□ 1.08
TUBA3GP-201ENST00000410028 AEBP2Q6ZN18 517 aaPredicted RBP21.8■■□□□ 1.08
TUBA3GP-201ENST00000410028 KIF27Q86VH2 1401 aa21.74■■□□□ 1.07
TUBA3GP-201ENST00000410028 PRG4Q92954 1404 aaPredicted RBP21.72■■□□□ 1.07
TUBA3GP-201ENST00000410028 JPH4Q96JJ6 628 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms