RNA–Protein interactions for RNA: ENST00000525550.1

KCNE3-202, Transcript of potassium voltage-gated channel subfamily E regulatory subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCNE3, Length 935 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNE3-202ENST00000525550 NISCHQ9Y2I1 1504 aa30.01■■■□□ 2.39
KCNE3-202ENST00000525550 ABCC9O60706 1549 aa27.98■■■□□ 2.07
KCNE3-202ENST00000525550 CCDC180Q9P1Z9 1646 aa27.24■■□□□ 1.95
KCNE3-202ENST00000525550 DNAJC5BQ9UF47 199 aa26.88■■□□□ 1.89
KCNE3-202ENST00000525550 RB1CC1Q8TDY2 1594 aa26.29■■□□□ 1.8
KCNE3-202ENST00000525550 PABPN1Q86U42 306 aaKnown RBP eCLIP25.94■■□□□ 1.74
KCNE3-202ENST00000525550 NACADO15069 1562 aa25.93■■□□□ 1.74
KCNE3-202ENST00000525550 UNC13AQ9UPW8 1703 aa25.68■■□□□ 1.7
KCNE3-202ENST00000525550 DCAF8L2P0C7V8 631 aa25.67■■□□□ 1.7
KCNE3-202ENST00000525550 BICRAQ9NZM4 1560 aa25.55■■□□□ 1.68
KCNE3-202ENST00000525550 MYO15BQ96JP2 1530 aa25.32■■□□□ 1.64
KCNE3-202ENST00000525550 CECR2Q9BXF3 1484 aa25.28■■□□□ 1.64
KCNE3-202ENST00000525550 CC2D2AQ9P2K1 1620 aa25.23■■□□□ 1.63
KCNE3-202ENST00000525550 DNAJC5Q9H3Z4 198 aa25.21■■□□□ 1.63
KCNE3-202ENST00000525550 SHROOM4Q9ULL8 1493 aa25.13■■□□□ 1.61
KCNE3-202ENST00000525550 EIF4G1Q04637 1599 aaKnown RBP24.99■■□□□ 1.59
KCNE3-202ENST00000525550 SCRIBQ14160 1630 aa24.8■■□□□ 1.56
KCNE3-202ENST00000525550 DCAF1Q9Y4B6 1507 aa24.72■■□□□ 1.55
KCNE3-202ENST00000525550 ZCCHC6Q5VYS8 1495 aaKnown RBP24.72■■□□□ 1.55
KCNE3-202ENST00000525550 CUX2O14529 1486 aa24.4■■□□□ 1.5
KCNE3-202ENST00000525550 ERCC6Q03468 1493 aa24.22■■□□□ 1.47
KCNE3-202ENST00000525550 NCAPD3P42695 1498 aa23.94■■□□□ 1.42
KCNE3-202ENST00000525550 TRIM41Q8WV44 630 aa23.83■■□□□ 1.41
KCNE3-202ENST00000525550 NESP48681 1621 aa23.83■■□□□ 1.41
KCNE3-202ENST00000525550 ATAD2BQ9ULI0 1458 aa23.77■■□□□ 1.4
KCNE3-202ENST00000525550 THOC2Q8NI27 1593 aaKnown RBP23.72■■□□□ 1.39
KCNE3-202ENST00000525550 HMGXB3Q12766 1538 aa23.7■■□□□ 1.38
KCNE3-202ENST00000525550 SMARCA2P51531 1590 aa23.67■■□□□ 1.38
KCNE3-202ENST00000525550 SMARCA4P51532 1647 aa23.57■■□□□ 1.36
KCNE3-202ENST00000525550 LAMC3Q9Y6N6 1575 aa23.52■■□□□ 1.36
KCNE3-202ENST00000525550 BAZ1BQ9UIG0 1483 aaKnown RBP23.52■■□□□ 1.36
KCNE3-202ENST00000525550 KIF21AQ7Z4S6 1674 aa23.48■■□□□ 1.35
KCNE3-202ENST00000525550 PDS5BQ9NTI5 1447 aa23.42■■□□□ 1.34
KCNE3-202ENST00000525550 BAZ1AQ9NRL2 1556 aaPredicted RBP23.35■■□□□ 1.33
KCNE3-202ENST00000525550 PEG3Q9GZU2 1588 aa23.33■■□□□ 1.33
KCNE3-202ENST00000525550 MRC2Q9UBG0 1479 aa23.28■■□□□ 1.32
KCNE3-202ENST00000525550 WDR62O43379 1518 aa23.23■■□□□ 1.31
KCNE3-202ENST00000525550 CADPSQ9ULU8 1353 aa23.19■■□□□ 1.3
KCNE3-202ENST00000525550 OSCARQ8IYS5 282 aa23.16■■□□□ 1.3
KCNE3-202ENST00000525550 MROH2BQ7Z745 1585 aa23.13■■□□□ 1.29
KCNE3-202ENST00000525550 CEP164Q9UPV0 1460 aa23.04■■□□□ 1.28
KCNE3-202ENST00000525550 RIMBP3CA6NJZ7 1639 aa22.95■■□□□ 1.26
KCNE3-202ENST00000525550 RIMBP3BA6NNM3 1639 aa22.95■■□□□ 1.26
KCNE3-202ENST00000525550 RIMBP3Q9UFD9 1639 aa22.95■■□□□ 1.26
KCNE3-202ENST00000525550 FANCD2Q9BXW9 1451 aa22.94■■□□□ 1.26
KCNE3-202ENST00000525550 WIZO95785 1651 aa22.81■■□□□ 1.24
KCNE3-202ENST00000525550 ARHGEF11O15085 1522 aa22.81■■□□□ 1.24
KCNE3-202ENST00000525550 URB2Q14146 1524 aaKnown RBP22.8■■□□□ 1.24
KCNE3-202ENST00000525550 CFTRP13569 1480 aa22.77■■□□□ 1.24
KCNE3-202ENST00000525550 TRHP20396 242 aaPredicted RBP22.68■■□□□ 1.22
KCNE3-202ENST00000525550 CYB5RLQ6IPT4 315 aa22.68■■□□□ 1.22
KCNE3-202ENST00000525550 ZNF608Q9ULD9 1512 aaPredicted RBP22.64■■□□□ 1.21
KCNE3-202ENST00000525550 IFT140Q96RY7 1462 aa22.6■■□□□ 1.21
KCNE3-202ENST00000525550 AEBP2Q6ZN18 517 aaPredicted RBP22.56■■□□□ 1.2
KCNE3-202ENST00000525550 ARAP1Q96P48 1450 aa22.54■■□□□ 1.2
KCNE3-202ENST00000525550 EIF4G3O43432 1585 aaKnown RBP22.48■■□□□ 1.19
KCNE3-202ENST00000525550 TOP2AP11388 1531 aaKnown RBP22.47■■□□□ 1.19
KCNE3-202ENST00000525550 PRDM2Q13029 1718 aa22.47■■□□□ 1.19
KCNE3-202ENST00000525550 CHD1O14646 1710 aa22.44■■□□□ 1.18
KCNE3-202ENST00000525550 TOPBP1Q92547 1522 aa22.42■■□□□ 1.18
KCNE3-202ENST00000525550 RSF1Q96T23 1441 aaPredicted RBP22.41■■□□□ 1.18
KCNE3-202ENST00000525550 FBLN2P98095 1184 aa22.36■■□□□ 1.17
KCNE3-202ENST00000525550 AQRO60306 1485 aaKnown RBP eCLIP22.34■■□□□ 1.17
KCNE3-202ENST00000525550 ABCC8Q09428 1581 aa22.31■■□□□ 1.16
KCNE3-202ENST00000525550 DNMBPQ6XZF7 1577 aa22.27■■□□□ 1.16
KCNE3-202ENST00000525550 TARBP1Q13395 1621 aaKnown RBP22.27■■□□□ 1.16
KCNE3-202ENST00000525550 CCDC88BA6NC98 1476 aa22.22■■□□□ 1.15
KCNE3-202ENST00000525550 CLASP1Q7Z460 1538 aa22.16■■□□□ 1.14
KCNE3-202ENST00000525550 POLA1P09884 1462 aaPredicted RBP22.15■■□□□ 1.14
KCNE3-202ENST00000525550 SNAPC4Q5SXM2 1469 aa22.1■■□□□ 1.13
KCNE3-202ENST00000525550 TDRD9Q8NDG6 1382 aaKnown RBP22.1■■□□□ 1.13
KCNE3-202ENST00000525550 SYNJ1O43426 1573 aa22.09■■□□□ 1.13
KCNE3-202ENST00000525550 RAD54L2Q9Y4B4 1467 aa22.09■■□□□ 1.13
KCNE3-202ENST00000525550 CHMP7Q8WUX9 453 aaPredicted RBP22.06■■□□□ 1.12
KCNE3-202ENST00000525550 SOGA1O94964 1423 aa22.03■■□□□ 1.12
KCNE3-202ENST00000525550 GAPVD1Q14C86 1478 aa22■■□□□ 1.11
KCNE3-202ENST00000525550 MAGI1Q96QZ7 1491 aaPredicted RBP22■■□□□ 1.11
KCNE3-202ENST00000525550 WDR97A6NE52 1622 aa21.98■■□□□ 1.11
KCNE3-202ENST00000525550 SYNJ2O15056 1496 aa21.95■■□□□ 1.1
KCNE3-202ENST00000525550 GRIN2BQ13224 1484 aa21.93■■□□□ 1.1
KCNE3-202ENST00000525550 FGD5Q6ZNL6 1462 aa21.91■■□□□ 1.1
KCNE3-202ENST00000525550 PBRM1Q86U86 1689 aa21.79■■□□□ 1.08
KCNE3-202ENST00000525550 ERCC6L2Q5T890 1561 aa21.78■■□□□ 1.08
KCNE3-202ENST00000525550 CUX1P39880 1505 aa21.77■■□□□ 1.08
KCNE3-202ENST00000525550 KIF13AQ9H1H9 1805 aa21.69■■□□□ 1.06
KCNE3-202ENST00000525550 CEP170Q5SW79 1584 aa21.67■■□□□ 1.06
KCNE3-202ENST00000525550 ILDR1Q86SU0 546 aaPredicted RBP21.65■■□□□ 1.06
KCNE3-202ENST00000525550 ABCA5Q8WWZ7 1642 aa21.65■■□□□ 1.06
KCNE3-202ENST00000525550 GRIN2AQ12879 1464 aa21.64■■□□□ 1.06
KCNE3-202ENST00000525550 ABCA10Q8WWZ4 1543 aa21.6■■□□□ 1.05
KCNE3-202ENST00000525550 NUP160Q12769 1436 aa21.59■■□□□ 1.05
KCNE3-202ENST00000525550 SHROOM2Q13796 1616 aa21.58■■□□□ 1.04
KCNE3-202ENST00000525550 ADAMTS12P58397 1594 aa21.55■■□□□ 1.04
KCNE3-202ENST00000525550 KDM4FA0A1W2PPD8 638 aa21.54■■□□□ 1.04
KCNE3-202ENST00000525550 FAM69CQ0P6D2 419 aa21.52■■□□□ 1.04
KCNE3-202ENST00000525550 ABCC10Q5T3U5 1492 aa21.5■■□□□ 1.03
KCNE3-202ENST00000525550 PRG4Q92954 1404 aaPredicted RBP21.46■■□□□ 1.03
KCNE3-202ENST00000525550 FHAD1B1AJZ9 1412 aa21.45■■□□□ 1.02
KCNE3-202ENST00000525550 KDM6BO15054 1643 aa21.44■■□□□ 1.02
KCNE3-202ENST00000525550 DIP2BQ9P265 1576 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms