RNA–Protein interactions for RNA: ENST00000572154.1

CLDN6-203, Transcript of claudin 6, humanhuman

TSL 3 BASIC

Gene CLDN6, Length 461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6-203ENST00000572154 NISCHQ9Y2I1 1504 aa30.58■■■□□ 2.49
CLDN6-203ENST00000572154 ABCC9O60706 1549 aa27.86■■■□□ 2.05
CLDN6-203ENST00000572154 CCDC180Q9P1Z9 1646 aa27.49■■□□□ 1.99
CLDN6-203ENST00000572154 DNAJC5BQ9UF47 199 aa26.51■■□□□ 1.83
CLDN6-203ENST00000572154 RB1CC1Q8TDY2 1594 aa26.33■■□□□ 1.8
CLDN6-203ENST00000572154 NACADO15069 1562 aa26.09■■□□□ 1.77
CLDN6-203ENST00000572154 DCAF8L2P0C7V8 631 aa25.95■■□□□ 1.74
CLDN6-203ENST00000572154 PABPN1Q86U42 306 aaKnown RBP eCLIP25.94■■□□□ 1.74
CLDN6-203ENST00000572154 UNC13AQ9UPW8 1703 aa25.77■■□□□ 1.72
CLDN6-203ENST00000572154 BICRAQ9NZM4 1560 aa25.65■■□□□ 1.7
CLDN6-203ENST00000572154 MYO15BQ96JP2 1530 aa25.64■■□□□ 1.7
CLDN6-203ENST00000572154 ZCCHC6Q5VYS8 1495 aaKnown RBP25.27■■□□□ 1.64
CLDN6-203ENST00000572154 DCAF1Q9Y4B6 1507 aa25.22■■□□□ 1.63
CLDN6-203ENST00000572154 SHROOM4Q9ULL8 1493 aa25.18■■□□□ 1.62
CLDN6-203ENST00000572154 CC2D2AQ9P2K1 1620 aa25.13■■□□□ 1.61
CLDN6-203ENST00000572154 CECR2Q9BXF3 1484 aa25.11■■□□□ 1.61
CLDN6-203ENST00000572154 SCRIBQ14160 1630 aa25.08■■□□□ 1.6
CLDN6-203ENST00000572154 EIF4G1Q04637 1599 aaKnown RBP25.01■■□□□ 1.59
CLDN6-203ENST00000572154 DNAJC5Q9H3Z4 198 aa24.49■■□□□ 1.51
CLDN6-203ENST00000572154 NCAPD3P42695 1498 aa24.14■■□□□ 1.46
CLDN6-203ENST00000572154 CUX2O14529 1486 aa24.08■■□□□ 1.45
CLDN6-203ENST00000572154 ERCC6Q03468 1493 aa24.02■■□□□ 1.44
CLDN6-203ENST00000572154 ATAD2BQ9ULI0 1458 aa24.02■■□□□ 1.44
CLDN6-203ENST00000572154 SMARCA4P51532 1647 aa23.89■■□□□ 1.42
CLDN6-203ENST00000572154 SMARCA2P51531 1590 aa23.88■■□□□ 1.41
CLDN6-203ENST00000572154 HMGXB3Q12766 1538 aa23.88■■□□□ 1.41
CLDN6-203ENST00000572154 NESP48681 1621 aa23.88■■□□□ 1.41
CLDN6-203ENST00000572154 BAZ1BQ9UIG0 1483 aaKnown RBP23.74■■□□□ 1.39
CLDN6-203ENST00000572154 BAZ1AQ9NRL2 1556 aaPredicted RBP23.72■■□□□ 1.39
CLDN6-203ENST00000572154 PEG3Q9GZU2 1588 aa23.67■■□□□ 1.38
CLDN6-203ENST00000572154 THOC2Q8NI27 1593 aaKnown RBP23.65■■□□□ 1.38
CLDN6-203ENST00000572154 LAMC3Q9Y6N6 1575 aa23.59■■□□□ 1.37
CLDN6-203ENST00000572154 MROH2BQ7Z745 1585 aa23.58■■□□□ 1.37
CLDN6-203ENST00000572154 KIF21AQ7Z4S6 1674 aa23.5■■□□□ 1.35
CLDN6-203ENST00000572154 PDS5BQ9NTI5 1447 aa23.47■■□□□ 1.35
CLDN6-203ENST00000572154 CADPSQ9ULU8 1353 aa23.39■■□□□ 1.33
CLDN6-203ENST00000572154 MRC2Q9UBG0 1479 aa23.3■■□□□ 1.32
CLDN6-203ENST00000572154 WIZO95785 1651 aa23.27■■□□□ 1.32
CLDN6-203ENST00000572154 TRIM41Q8WV44 630 aa23.26■■□□□ 1.31
CLDN6-203ENST00000572154 WDR62O43379 1518 aa23.25■■□□□ 1.31
CLDN6-203ENST00000572154 CEP164Q9UPV0 1460 aa23.13■■□□□ 1.29
CLDN6-203ENST00000572154 FANCD2Q9BXW9 1451 aa23.11■■□□□ 1.29
CLDN6-203ENST00000572154 CFTRP13569 1480 aa23.05■■□□□ 1.28
CLDN6-203ENST00000572154 RSF1Q96T23 1441 aaPredicted RBP22.99■■□□□ 1.27
CLDN6-203ENST00000572154 OSCARQ8IYS5 282 aa22.98■■□□□ 1.27
CLDN6-203ENST00000572154 URB2Q14146 1524 aaKnown RBP22.96■■□□□ 1.27
CLDN6-203ENST00000572154 TOP2AP11388 1531 aaKnown RBP22.92■■□□□ 1.26
CLDN6-203ENST00000572154 ZNF608Q9ULD9 1512 aaPredicted RBP22.74■■□□□ 1.23
CLDN6-203ENST00000572154 CCDC88BA6NC98 1476 aa22.72■■□□□ 1.23
CLDN6-203ENST00000572154 PRDM2Q13029 1718 aa22.71■■□□□ 1.23
CLDN6-203ENST00000572154 RIMBP3CA6NJZ7 1639 aa22.7■■□□□ 1.22
CLDN6-203ENST00000572154 RIMBP3BA6NNM3 1639 aa22.7■■□□□ 1.22
CLDN6-203ENST00000572154 RIMBP3Q9UFD9 1639 aa22.7■■□□□ 1.22
CLDN6-203ENST00000572154 IFT140Q96RY7 1462 aa22.69■■□□□ 1.22
CLDN6-203ENST00000572154 TOPBP1Q92547 1522 aa22.64■■□□□ 1.21
CLDN6-203ENST00000572154 ARHGEF11O15085 1522 aa22.6■■□□□ 1.21
CLDN6-203ENST00000572154 EIF4G3O43432 1585 aaKnown RBP22.54■■□□□ 1.2
CLDN6-203ENST00000572154 ABCC8Q09428 1581 aa22.53■■□□□ 1.2
CLDN6-203ENST00000572154 DNMBPQ6XZF7 1577 aa22.5■■□□□ 1.19
CLDN6-203ENST00000572154 AQRO60306 1485 aaKnown RBP eCLIP22.5■■□□□ 1.19
CLDN6-203ENST00000572154 CYB5RLQ6IPT4 315 aa22.48■■□□□ 1.19
CLDN6-203ENST00000572154 TARBP1Q13395 1621 aaKnown RBP22.46■■□□□ 1.19
CLDN6-203ENST00000572154 CHD1O14646 1710 aa22.43■■□□□ 1.18
CLDN6-203ENST00000572154 POLA1P09884 1462 aaPredicted RBP22.4■■□□□ 1.18
CLDN6-203ENST00000572154 ARAP1Q96P48 1450 aa22.38■■□□□ 1.17
CLDN6-203ENST00000572154 FBLN2P98095 1184 aa22.37■■□□□ 1.17
CLDN6-203ENST00000572154 RAD54L2Q9Y4B4 1467 aa22.34■■□□□ 1.17
CLDN6-203ENST00000572154 TDRD9Q8NDG6 1382 aaKnown RBP22.31■■□□□ 1.16
CLDN6-203ENST00000572154 SOGA1O94964 1423 aa22.3■■□□□ 1.16
CLDN6-203ENST00000572154 TRHP20396 242 aaPredicted RBP22.29■■□□□ 1.16
CLDN6-203ENST00000572154 SNAPC4Q5SXM2 1469 aa22.22■■□□□ 1.15
CLDN6-203ENST00000572154 FGD5Q6ZNL6 1462 aa22.21■■□□□ 1.15
CLDN6-203ENST00000572154 CLASP1Q7Z460 1538 aa22.19■■□□□ 1.14
CLDN6-203ENST00000572154 CUX1P39880 1505 aa22.16■■□□□ 1.14
CLDN6-203ENST00000572154 CHMP7Q8WUX9 453 aaPredicted RBP22.16■■□□□ 1.14
CLDN6-203ENST00000572154 WDR97A6NE52 1622 aa22.15■■□□□ 1.14
CLDN6-203ENST00000572154 MAGI1Q96QZ7 1491 aaPredicted RBP22.13■■□□□ 1.13
CLDN6-203ENST00000572154 GRIN2BQ13224 1484 aa22.1■■□□□ 1.13
CLDN6-203ENST00000572154 SYNJ1O43426 1573 aa22.1■■□□□ 1.13
CLDN6-203ENST00000572154 SYNJ2O15056 1496 aa22.07■■□□□ 1.12
CLDN6-203ENST00000572154 GAPVD1Q14C86 1478 aa22■■□□□ 1.11
CLDN6-203ENST00000572154 PBRM1Q86U86 1689 aa21.97■■□□□ 1.11
CLDN6-203ENST00000572154 ABCA10Q8WWZ4 1543 aa21.94■■□□□ 1.1
CLDN6-203ENST00000572154 ABCA5Q8WWZ7 1642 aa21.92■■□□□ 1.1
CLDN6-203ENST00000572154 ERCC6L2Q5T890 1561 aa21.87■■□□□ 1.09
CLDN6-203ENST00000572154 GRIN2AQ12879 1464 aa21.83■■□□□ 1.09
CLDN6-203ENST00000572154 AEBP2Q6ZN18 517 aaPredicted RBP21.82■■□□□ 1.08
CLDN6-203ENST00000572154 NUP160Q12769 1436 aa21.79■■□□□ 1.08
CLDN6-203ENST00000572154 CEP170Q5SW79 1584 aa21.78■■□□□ 1.08
CLDN6-203ENST00000572154 WRNQ14191 1432 aaPredicted RBP eCLIP21.78■■□□□ 1.08
CLDN6-203ENST00000572154 ADAMTS12P58397 1594 aa21.77■■□□□ 1.08
CLDN6-203ENST00000572154 SUPT5HO00267 1087 aaKnown RBP21.75■■□□□ 1.07
CLDN6-203ENST00000572154 SHROOM2Q13796 1616 aa21.71■■□□□ 1.07
CLDN6-203ENST00000572154 FHAD1B1AJZ9 1412 aa21.71■■□□□ 1.07
CLDN6-203ENST00000572154 TOP2BQ02880 1626 aa21.69■■□□□ 1.06
CLDN6-203ENST00000572154 BIVM-ERCC5R4GMW8 1640 aa21.69■■□□□ 1.06
CLDN6-203ENST00000572154 ERICH3Q5RHP9 1530 aa21.63■■□□□ 1.05
CLDN6-203ENST00000572154 PRG4Q92954 1404 aaPredicted RBP21.6■■□□□ 1.05
CLDN6-203ENST00000572154 JPH4Q96JJ6 628 aa21.58■■□□□ 1.05
CLDN6-203ENST00000572154 KIF13AQ9H1H9 1805 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms