RNA–Protein interactions for RNA: ENST00000366996.1

LPGAT1-201, Transcript of lysophosphatidylglycerol acyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPGAT1, Length 2,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPGAT1-201ENST00000366996 NISCHQ9Y2I1 1504 aa31.82■■■□□ 2.68
LPGAT1-201ENST00000366996 CCDC180Q9P1Z9 1646 aa28.33■■■□□ 2.13
LPGAT1-201ENST00000366996 ABCC9O60706 1549 aa27.52■■■□□ 2
LPGAT1-201ENST00000366996 NACADO15069 1562 aa26.61■■□□□ 1.85
LPGAT1-201ENST00000366996 RB1CC1Q8TDY2 1594 aa26.6■■□□□ 1.85
LPGAT1-201ENST00000366996 ZCCHC6Q5VYS8 1495 aaKnown RBP26.53■■□□□ 1.84
LPGAT1-201ENST00000366996 MYO15BQ96JP2 1530 aa26.53■■□□□ 1.84
LPGAT1-201ENST00000366996 DCAF1Q9Y4B6 1507 aa26.42■■□□□ 1.82
LPGAT1-201ENST00000366996 DCAF8L2P0C7V8 631 aa26.41■■□□□ 1.82
LPGAT1-201ENST00000366996 UNC13AQ9UPW8 1703 aa25.95■■□□□ 1.75
LPGAT1-201ENST00000366996 BICRAQ9NZM4 1560 aa25.76■■□□□ 1.71
LPGAT1-201ENST00000366996 SCRIBQ14160 1630 aa25.73■■□□□ 1.71
LPGAT1-201ENST00000366996 PABPN1Q86U42 306 aaKnown RBP eCLIP25.68■■□□□ 1.7
LPGAT1-201ENST00000366996 SHROOM4Q9ULL8 1493 aa25.63■■□□□ 1.69
LPGAT1-201ENST00000366996 DNAJC5BQ9UF47 199 aa25.17■■□□□ 1.62
LPGAT1-201ENST00000366996 EIF4G1Q04637 1599 aaKnown RBP25.09■■□□□ 1.61
LPGAT1-201ENST00000366996 CC2D2AQ9P2K1 1620 aa24.95■■□□□ 1.58
LPGAT1-201ENST00000366996 CECR2Q9BXF3 1484 aa24.77■■□□□ 1.56
LPGAT1-201ENST00000366996 BAZ1AQ9NRL2 1556 aaPredicted RBP24.68■■□□□ 1.54
LPGAT1-201ENST00000366996 SMARCA4P51532 1647 aa24.68■■□□□ 1.54
LPGAT1-201ENST00000366996 SMARCA2P51531 1590 aa24.54■■□□□ 1.52
LPGAT1-201ENST00000366996 NCAPD3P42695 1498 aa24.54■■□□□ 1.52
LPGAT1-201ENST00000366996 ATAD2BQ9ULI0 1458 aa24.52■■□□□ 1.52
LPGAT1-201ENST00000366996 PEG3Q9GZU2 1588 aa24.5■■□□□ 1.51
LPGAT1-201ENST00000366996 MROH2BQ7Z745 1585 aa24.48■■□□□ 1.51
LPGAT1-201ENST00000366996 HMGXB3Q12766 1538 aa24.44■■□□□ 1.5
LPGAT1-201ENST00000366996 BAZ1BQ9UIG0 1483 aaKnown RBP24.32■■□□□ 1.48
LPGAT1-201ENST00000366996 RSF1Q96T23 1441 aaPredicted RBP24.24■■□□□ 1.47
LPGAT1-201ENST00000366996 WIZO95785 1651 aa24.2■■□□□ 1.47
LPGAT1-201ENST00000366996 TOP2AP11388 1531 aaKnown RBP24.01■■□□□ 1.43
LPGAT1-201ENST00000366996 LAMC3Q9Y6N6 1575 aa23.89■■□□□ 1.41
LPGAT1-201ENST00000366996 NESP48681 1621 aa23.83■■□□□ 1.4
LPGAT1-201ENST00000366996 CADPSQ9ULU8 1353 aa23.8■■□□□ 1.4
LPGAT1-201ENST00000366996 ERCC6Q03468 1493 aa23.76■■□□□ 1.39
LPGAT1-201ENST00000366996 PDS5BQ9NTI5 1447 aa23.71■■□□□ 1.39
LPGAT1-201ENST00000366996 CCDC88BA6NC98 1476 aa23.69■■□□□ 1.38
LPGAT1-201ENST00000366996 CFTRP13569 1480 aa23.69■■□□□ 1.38
LPGAT1-201ENST00000366996 KIF21AQ7Z4S6 1674 aa23.59■■□□□ 1.37
LPGAT1-201ENST00000366996 CUX2O14529 1486 aa23.56■■□□□ 1.36
LPGAT1-201ENST00000366996 SUPT5HO00267 1087 aaKnown RBP23.55■■□□□ 1.36
LPGAT1-201ENST00000366996 PRDM2Q13029 1718 aa23.53■■□□□ 1.36
LPGAT1-201ENST00000366996 THOC2Q8NI27 1593 aaKnown RBP23.53■■□□□ 1.36
LPGAT1-201ENST00000366996 FANCD2Q9BXW9 1451 aa23.51■■□□□ 1.35
LPGAT1-201ENST00000366996 CEP164Q9UPV0 1460 aa23.49■■□□□ 1.35
LPGAT1-201ENST00000366996 MRC2Q9UBG0 1479 aa23.45■■□□□ 1.34
LPGAT1-201ENST00000366996 WDR62O43379 1518 aa23.39■■□□□ 1.33
LPGAT1-201ENST00000366996 URB2Q14146 1524 aaKnown RBP23.25■■□□□ 1.31
LPGAT1-201ENST00000366996 ABCC8Q09428 1581 aa23.22■■□□□ 1.31
LPGAT1-201ENST00000366996 DNMBPQ6XZF7 1577 aa23.15■■□□□ 1.3
LPGAT1-201ENST00000366996 TOPBP1Q92547 1522 aa23.14■■□□□ 1.3
LPGAT1-201ENST00000366996 IFT140Q96RY7 1462 aa23.02■■□□□ 1.28
LPGAT1-201ENST00000366996 CUX1P39880 1505 aa22.97■■□□□ 1.27
LPGAT1-201ENST00000366996 POLA1P09884 1462 aaPredicted RBP22.95■■□□□ 1.26
LPGAT1-201ENST00000366996 TARBP1Q13395 1621 aaKnown RBP22.9■■□□□ 1.26
LPGAT1-201ENST00000366996 FGD5Q6ZNL6 1462 aa22.89■■□□□ 1.25
LPGAT1-201ENST00000366996 WRNQ14191 1432 aaPredicted RBP eCLIP22.86■■□□□ 1.25
LPGAT1-201ENST00000366996 SOGA1O94964 1423 aa22.84■■□□□ 1.25
LPGAT1-201ENST00000366996 BIVM-ERCC5R4GMW8 1640 aa22.83■■□□□ 1.25
LPGAT1-201ENST00000366996 TOP2BQ02880 1626 aa22.83■■□□□ 1.25
LPGAT1-201ENST00000366996 ZNF608Q9ULD9 1512 aaPredicted RBP22.83■■□□□ 1.24
LPGAT1-201ENST00000366996 WDR97A6NE52 1622 aa22.82■■□□□ 1.24
LPGAT1-201ENST00000366996 RAD54L2Q9Y4B4 1467 aa22.79■■□□□ 1.24
LPGAT1-201ENST00000366996 EIF4G3O43432 1585 aaKnown RBP22.79■■□□□ 1.24
LPGAT1-201ENST00000366996 SYNJ1O43426 1573 aa22.77■■□□□ 1.24
LPGAT1-201ENST00000366996 ABCA10Q8WWZ4 1543 aa22.71■■□□□ 1.23
LPGAT1-201ENST00000366996 DNAJC5Q9H3Z4 198 aa22.7■■□□□ 1.23
LPGAT1-201ENST00000366996 AQRO60306 1485 aaKnown RBP eCLIP22.7■■□□□ 1.222e-11■■■■■ 45
LPGAT1-201ENST00000366996 TDRD9Q8NDG6 1382 aaKnown RBP22.66■■□□□ 1.22
LPGAT1-201ENST00000366996 ABCA5Q8WWZ7 1642 aa22.61■■□□□ 1.21
LPGAT1-201ENST00000366996 GRIN2BQ13224 1484 aa22.6■■□□□ 1.21
LPGAT1-201ENST00000366996 GAPVD1Q14C86 1478 aa22.59■■□□□ 1.21
LPGAT1-201ENST00000366996 MAGI1Q96QZ7 1491 aaPredicted RBP22.56■■□□□ 1.2
LPGAT1-201ENST00000366996 PBRM1Q86U86 1689 aa22.54■■□□□ 1.2
LPGAT1-201ENST00000366996 OSCARQ8IYS5 282 aa22.53■■□□□ 1.2
LPGAT1-201ENST00000366996 SNAPC4Q5SXM2 1469 aa22.53■■□□□ 1.2
LPGAT1-201ENST00000366996 CHD1O14646 1710 aa22.47■■□□□ 1.19
LPGAT1-201ENST00000366996 ERICH3Q5RHP9 1530 aa22.46■■□□□ 1.19
LPGAT1-201ENST00000366996 SYNJ2O15056 1496 aa22.46■■□□□ 1.19
LPGAT1-201ENST00000366996 KIF27Q86VH2 1401 aa22.4■■□□□ 1.18
LPGAT1-201ENST00000366996 CHMP7Q8WUX9 453 aaPredicted RBP22.39■■□□□ 1.17
LPGAT1-201ENST00000366996 ADAMTS12P58397 1594 aa22.38■■□□□ 1.17
LPGAT1-201ENST00000366996 FBLN2P98095 1184 aa22.38■■□□□ 1.17
LPGAT1-201ENST00000366996 FHAD1B1AJZ9 1412 aa22.35■■□□□ 1.17
LPGAT1-201ENST00000366996 TRIM41Q8WV44 630 aa22.31■■□□□ 1.16
LPGAT1-201ENST00000366996 GRIN2AQ12879 1464 aa22.3■■□□□ 1.16
LPGAT1-201ENST00000366996 IGF1RP08069 1367 aa22.27■■□□□ 1.16
LPGAT1-201ENST00000366996 CLASP1Q7Z460 1538 aa22.27■■□□□ 1.16
LPGAT1-201ENST00000366996 CUL7Q14999 1698 aa22.27■■□□□ 1.16
LPGAT1-201ENST00000366996 NUP160Q12769 1436 aa22.22■■□□□ 1.15
LPGAT1-201ENST00000366996 ARHGEF11O15085 1522 aa22.17■■□□□ 1.14
LPGAT1-201ENST00000366996 CEP170Q5SW79 1584 aa22.17■■□□□ 1.14
LPGAT1-201ENST00000366996 RIMBP3CA6NJZ7 1639 aa22.16■■□□□ 1.14
LPGAT1-201ENST00000366996 RIMBP3BA6NNM3 1639 aa22.16■■□□□ 1.14
LPGAT1-201ENST00000366996 RIMBP3Q9UFD9 1639 aa22.16■■□□□ 1.14
LPGAT1-201ENST00000366996 CARMIL1Q5VZK9 1371 aa22.14■■□□□ 1.13
LPGAT1-201ENST00000366996 RUSC2Q8N2Y8 1516 aa22.11■■□□□ 1.13
LPGAT1-201ENST00000366996 SHROOM2Q13796 1616 aa22.06■■□□□ 1.12
LPGAT1-201ENST00000366996 CHIC1Q5VXU3 224 aa22.06■■□□□ 1.12
LPGAT1-201ENST00000366996 EEA1Q15075 1411 aa22.05■■□□□ 1.12
LPGAT1-201ENST00000366996 RAPGEF2Q9Y4G8 1499 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms