Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.62□□□□□ -0.23
PSMD4P55036 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PSMD4P55036 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PSMD4P55036 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PSMD4P55036 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.62□□□□□ -0.23
PSMD4P55036 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PSMD4P55036 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PSMD4P55036 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
PSMD4P55036 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
PSMD4P55036 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PSMD4P55036 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PSMD4P55036 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
PSMD4P55036 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
PSMD4P55036 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
PSMD4P55036 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PSMD4P55036 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PSMD4P55036 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PSMD4P55036 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.61□□□□□ -0.23
PSMD4P55036 AC152010.1-201ENST00000415779 2006 ntBASIC13.61□□□□□ -0.23
PSMD4P55036 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
PSMD4P55036 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.61□□□□□ -0.23
PSMD4P55036 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PSMD4P55036 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
PSMD4P55036 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PSMD4P55036 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PSMD4P55036 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PSMD4P55036 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PSMD4P55036 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PSMD4P55036 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.61□□□□□ -0.23
PSMD4P55036 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PSMD4P55036 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PSMD4P55036 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PSMD4P55036 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.61□□□□□ -0.23
PSMD4P55036 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.61□□□□□ -0.23
PSMD4P55036 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.61□□□□□ -0.23
PSMD4P55036 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
PSMD4P55036 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.61□□□□□ -0.23
PSMD4P55036 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.61□□□□□ -0.23
PSMD4P55036 HLA-V-201ENST00000429037 534 ntBASIC13.61□□□□□ -0.23
PSMD4P55036 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.61□□□□□ -0.23
PSMD4P55036 CSF2RBP1-201ENST00000447905 391 ntBASIC13.61□□□□□ -0.23
PSMD4P55036 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.61□□□□□ -0.23
PSMD4P55036 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
PSMD4P55036 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.61□□□□□ -0.23
PSMD4P55036 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.61□□□□□ -0.23
PSMD4P55036 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.61□□□□□ -0.23
PSMD4P55036 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.61□□□□□ -0.23
PSMD4P55036 MIR4683-201ENST00000579659 81 ntBASIC13.61□□□□□ -0.23
PSMD4P55036 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.61□□□□□ -0.23
PSMD4P55036 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.61□□□□□ -0.23
PSMD4P55036 COX11-210ENST00000639671 696 ntBASIC13.61□□□□□ -0.23
PSMD4P55036 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.61□□□□□ -0.23
PSMD4P55036 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PSMD4P55036 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PSMD4P55036 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PSMD4P55036 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PSMD4P55036 AC097359.2-201ENST00000604992 2389 ntBASIC13.61□□□□□ -0.23
PSMD4P55036 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PSMD4P55036 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PSMD4P55036 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.61□□□□□ -0.23
PSMD4P55036 AL590440.2-201ENST00000641973 1595 ntBASIC13.61□□□□□ -0.23
PSMD4P55036 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PSMD4P55036 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PSMD4P55036 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.61□□□□□ -0.23
PSMD4P55036 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.61□□□□□ -0.23
PSMD4P55036 SHC1P1-201ENST00000425230 1745 ntBASIC13.61□□□□□ -0.23
PSMD4P55036 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
PSMD4P55036 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PSMD4P55036 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PSMD4P55036 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PSMD4P55036 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
PSMD4P55036 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PSMD4P55036 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
PSMD4P55036 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
PSMD4P55036 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
PSMD4P55036 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PSMD4P55036 KHSRPP1-201ENST00000427983 1768 ntBASIC13.6□□□□□ -0.23
PSMD4P55036 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.6□□□□□ -0.23
PSMD4P55036 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PSMD4P55036 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PSMD4P55036 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.6□□□□□ -0.23
PSMD4P55036 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PSMD4P55036 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
PSMD4P55036 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.6□□□□□ -0.23
PSMD4P55036 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
PSMD4P55036 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PSMD4P55036 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.6□□□□□ -0.23
PSMD4P55036 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PSMD4P55036 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PSMD4P55036 CR383656.2-201ENST00000548656 2254 ntBASIC13.6□□□□□ -0.23
PSMD4P55036 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PSMD4P55036 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
PSMD4P55036 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PSMD4P55036 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PSMD4P55036 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PSMD4P55036 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PSMD4P55036 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PSMD4P55036 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
PSMD4P55036 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
PSMD4P55036 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms