Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PRKCAP17252 AL138725.1-201ENST00000407347 1314 ntBASIC13.6□□□□□ -0.23
PRKCAP17252 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
PRKCAP17252 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PRKCAP17252 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.6□□□□□ -0.23
PRKCAP17252 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
PRKCAP17252 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
PRKCAP17252 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PRKCAP17252 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
PRKCAP17252 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PRKCAP17252 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRKCAP17252 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRKCAP17252 AL591122.2-201ENST00000624125 1853 ntBASIC13.59□□□□□ -0.23
PRKCAP17252 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
PRKCAP17252 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
PRKCAP17252 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.59□□□□□ -0.23
PRKCAP17252 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.59□□□□□ -0.23
PRKCAP17252 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC13.59□□□□□ -0.23
PRKCAP17252 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRKCAP17252 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PRKCAP17252 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRKCAP17252 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PRKCAP17252 BOLA2P3-201ENST00000404566 256 ntBASIC13.59□□□□□ -0.23
PRKCAP17252 ARSEP1-201ENST00000420443 635 ntBASIC13.59□□□□□ -0.23
PRKCAP17252 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PRKCAP17252 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.59□□□□□ -0.23
PRKCAP17252 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.59□□□□□ -0.23
PRKCAP17252 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.59□□□□□ -0.23
PRKCAP17252 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.59□□□□□ -0.23
PRKCAP17252 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRKCAP17252 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
PRKCAP17252 AC138951.2-201ENST00000623455 1161 ntBASIC13.59□□□□□ -0.23
PRKCAP17252 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.59□□□□□ -0.23
PRKCAP17252 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PRKCAP17252 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.59□□□□□ -0.23
PRKCAP17252 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
PRKCAP17252 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
PRKCAP17252 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
PRKCAP17252 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
PRKCAP17252 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PRKCAP17252 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
PRKCAP17252 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PRKCAP17252 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PRKCAP17252 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRKCAP17252 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
PRKCAP17252 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
PRKCAP17252 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
PRKCAP17252 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRKCAP17252 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRKCAP17252 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.59□□□□□ -0.23
PRKCAP17252 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
PRKCAP17252 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRKCAP17252 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRKCAP17252 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
PRKCAP17252 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
PRKCAP17252 AC015909.5-201ENST00000624336 2266 ntBASIC13.59□□□□□ -0.23
PRKCAP17252 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
PRKCAP17252 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.58□□□□□ -0.23
PRKCAP17252 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
PRKCAP17252 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
PRKCAP17252 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.58□□□□□ -0.23
PRKCAP17252 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
PRKCAP17252 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
PRKCAP17252 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
PRKCAP17252 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
PRKCAP17252 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC13.58□□□□□ -0.24
PRKCAP17252 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.58□□□□□ -0.24
PRKCAP17252 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PRKCAP17252 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PRKCAP17252 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
PRKCAP17252 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PRKCAP17252 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PRKCAP17252 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
PRKCAP17252 RN7SKP230-201ENST00000365642 335 ntBASIC13.58□□□□□ -0.24
PRKCAP17252 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
PRKCAP17252 AC112492.5-201ENST00000421897 457 ntBASIC13.58□□□□□ -0.24
PRKCAP17252 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.58□□□□□ -0.24
PRKCAP17252 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.58□□□□□ -0.24
PRKCAP17252 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.58□□□□□ -0.24
PRKCAP17252 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
PRKCAP17252 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.58□□□□□ -0.24
PRKCAP17252 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.58□□□□□ -0.24
PRKCAP17252 AC078819.1-201ENST00000547454 765 ntBASIC13.58□□□□□ -0.24
PRKCAP17252 AC012085.1-201ENST00000548270 765 ntBASIC13.58□□□□□ -0.24
PRKCAP17252 RAB43P1-201ENST00000561790 589 ntBASIC13.58□□□□□ -0.24
PRKCAP17252 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.58□□□□□ -0.24
PRKCAP17252 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.58□□□□□ -0.24
PRKCAP17252 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.58□□□□□ -0.24
PRKCAP17252 AC138696.2-201ENST00000607376 223 ntBASIC13.58□□□□□ -0.24
PRKCAP17252 AC006453.4-201ENST00000636949 1252 ntBASIC13.58□□□□□ -0.24
PRKCAP17252 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PRKCAP17252 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.58□□□□□ -0.24
PRKCAP17252 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PRKCAP17252 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PRKCAP17252 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
PRKCAP17252 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PRKCAP17252 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
PRKCAP17252 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
PRKCAP17252 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
PRKCAP17252 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms