Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
XRCC2O43543 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
XRCC2O43543 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC12.72□□□□□ -0.37
XRCC2O43543 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
XRCC2O43543 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
XRCC2O43543 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.72□□□□□ -0.37
XRCC2O43543 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
XRCC2O43543 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
XRCC2O43543 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
XRCC2O43543 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.72□□□□□ -0.37
XRCC2O43543 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
XRCC2O43543 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
XRCC2O43543 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
XRCC2O43543 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
XRCC2O43543 AC006001.1-201ENST00000325130 474 ntBASIC12.72□□□□□ -0.37
XRCC2O43543 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
XRCC2O43543 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
XRCC2O43543 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
XRCC2O43543 BOLA2P3-201ENST00000404566 256 ntBASIC12.72□□□□□ -0.37
XRCC2O43543 AC112492.5-201ENST00000421897 457 ntBASIC12.72□□□□□ -0.37
XRCC2O43543 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC12.72□□□□□ -0.37
XRCC2O43543 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
XRCC2O43543 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.72□□□□□ -0.37
XRCC2O43543 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
XRCC2O43543 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
XRCC2O43543 CR383656.12-201ENST00000549567 513 ntBASIC12.72□□□□□ -0.37
XRCC2O43543 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC12.72□□□□□ -0.37
XRCC2O43543 AC027237.1-201ENST00000560942 655 ntBASIC12.72□□□□□ -0.37
XRCC2O43543 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC12.72□□□□□ -0.37
XRCC2O43543 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC12.72□□□□□ -0.37
XRCC2O43543 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.72□□□□□ -0.37
XRCC2O43543 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
XRCC2O43543 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
XRCC2O43543 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
XRCC2O43543 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
XRCC2O43543 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
XRCC2O43543 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.72□□□□□ -0.37
XRCC2O43543 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
XRCC2O43543 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.72□□□□□ -0.37
XRCC2O43543 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
XRCC2O43543 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
XRCC2O43543 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
XRCC2O43543 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
XRCC2O43543 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
XRCC2O43543 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
XRCC2O43543 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
XRCC2O43543 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
XRCC2O43543 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
XRCC2O43543 AC020910.6-201ENST00000623084 1459 ntBASIC12.72□□□□□ -0.37
XRCC2O43543 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
XRCC2O43543 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
XRCC2O43543 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.72□□□□□ -0.37
XRCC2O43543 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
XRCC2O43543 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
XRCC2O43543 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
XRCC2O43543 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
XRCC2O43543 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
XRCC2O43543 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
XRCC2O43543 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
XRCC2O43543 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
XRCC2O43543 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
XRCC2O43543 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
XRCC2O43543 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
XRCC2O43543 AHCYP2-201ENST00000430630 1300 ntBASIC12.71□□□□□ -0.37
XRCC2O43543 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC12.71□□□□□ -0.37
XRCC2O43543 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
XRCC2O43543 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.71□□□□□ -0.37
XRCC2O43543 AC005252.3-201ENST00000623855 2258 ntBASIC12.71□□□□□ -0.37
XRCC2O43543 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
XRCC2O43543 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.71□□□□□ -0.37
XRCC2O43543 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
XRCC2O43543 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
XRCC2O43543 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12.71□□□□□ -0.37
XRCC2O43543 AL355994.2-201ENST00000447882 704 ntBASIC12.71□□□□□ -0.37
XRCC2O43543 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
XRCC2O43543 AP003171.2-201ENST00000528208 925 ntBASIC12.71□□□□□ -0.37
XRCC2O43543 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.71□□□□□ -0.37
XRCC2O43543 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.71□□□□□ -0.37
XRCC2O43543 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.71□□□□□ -0.37
XRCC2O43543 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
XRCC2O43543 AC073413.1-201ENST00000603927 732 ntBASIC12.71□□□□□ -0.37
XRCC2O43543 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC12.71□□□□□ -0.37
XRCC2O43543 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC12.71□□□□□ -0.37
XRCC2O43543 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
XRCC2O43543 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.71□□□□□ -0.37
XRCC2O43543 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
XRCC2O43543 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
XRCC2O43543 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
XRCC2O43543 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
XRCC2O43543 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.71□□□□□ -0.38
XRCC2O43543 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
XRCC2O43543 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
XRCC2O43543 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
XRCC2O43543 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
XRCC2O43543 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
XRCC2O43543 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.71□□□□□ -0.38
XRCC2O43543 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
XRCC2O43543 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
XRCC2O43543 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
XRCC2O43543 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.71□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms