RNA–Protein interactions for RNA: ENST00000338684.9

MUC1-202, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,107 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-202ENST00000338684 NISCHQ9Y2I1 1504 aa36.98■■■■□ 3.51
MUC1-202ENST00000338684 ABCC9O60706 1549 aa33.18■■■□□ 2.9
MUC1-202ENST00000338684 CCDC180Q9P1Z9 1646 aa33.07■■■□□ 2.88
MUC1-202ENST00000338684 RB1CC1Q8TDY2 1594 aa31.5■■■□□ 2.63
MUC1-202ENST00000338684 NACADO15069 1562 aa31.3■■■□□ 2.6
MUC1-202ENST00000338684 DCAF8L2P0C7V8 631 aa31.29■■■□□ 2.6
MUC1-202ENST00000338684 DNAJC5BQ9UF47 199 aa31.25■■■□□ 2.59
MUC1-202ENST00000338684 PABPN1Q86U42 306 aaKnown RBP eCLIP30.97■■■□□ 2.55
MUC1-202ENST00000338684 MYO15BQ96JP2 1530 aa30.87■■■□□ 2.53
MUC1-202ENST00000338684 UNC13AQ9UPW8 1703 aa30.84■■■□□ 2.53
MUC1-202ENST00000338684 BICRAQ9NZM4 1560 aa30.68■■■□□ 2.5
MUC1-202ENST00000338684 ZCCHC6Q5VYS8 1495 aaKnown RBP30.63■■■□□ 2.49
MUC1-202ENST00000338684 DCAF1Q9Y4B6 1507 aa30.49■■■□□ 2.47
MUC1-202ENST00000338684 SCRIBQ14160 1630 aa30.22■■■□□ 2.43
MUC1-202ENST00000338684 SHROOM4Q9ULL8 1493 aa30.12■■■□□ 2.41
MUC1-202ENST00000338684 CC2D2AQ9P2K1 1620 aa29.94■■■□□ 2.38
MUC1-202ENST00000338684 EIF4G1Q04637 1599 aaKnown RBP29.88■■■□□ 2.37
MUC1-202ENST00000338684 CECR2Q9BXF3 1484 aa29.87■■■□□ 2.37
MUC1-202ENST00000338684 NCAPD3P42695 1498 aa28.96■■■□□ 2.23
MUC1-202ENST00000338684 ATAD2BQ9ULI0 1458 aa28.88■■■□□ 2.21
MUC1-202ENST00000338684 SMARCA4P51532 1647 aa28.81■■■□□ 2.2
MUC1-202ENST00000338684 SMARCA2P51531 1590 aa28.72■■■□□ 2.19
MUC1-202ENST00000338684 DNAJC5Q9H3Z4 198 aa28.69■■■□□ 2.18
MUC1-202ENST00000338684 HMGXB3Q12766 1538 aa28.67■■■□□ 2.18
MUC1-202ENST00000338684 BAZ1AQ9NRL2 1556 aaPredicted RBP28.65■■■□□ 2.18
MUC1-202ENST00000338684 ERCC6Q03468 1493 aa28.58■■■□□ 2.17
MUC1-202ENST00000338684 BAZ1BQ9UIG0 1483 aaKnown RBP28.55■■■□□ 2.16
MUC1-202ENST00000338684 NESP48681 1621 aa28.54■■■□□ 2.16
MUC1-202ENST00000338684 MROH2BQ7Z745 1585 aa28.54■■■□□ 2.16
MUC1-202ENST00000338684 PEG3Q9GZU2 1588 aa28.52■■■□□ 2.16
MUC1-202ENST00000338684 CUX2O14529 1486 aa28.51■■■□□ 2.15
MUC1-202ENST00000338684 LAMC3Q9Y6N6 1575 aa28.23■■■□□ 2.11
MUC1-202ENST00000338684 WIZO95785 1651 aa28.18■■■□□ 2.1
MUC1-202ENST00000338684 THOC2Q8NI27 1593 aaKnown RBP28.16■■■□□ 2.1
MUC1-202ENST00000338684 KIF21AQ7Z4S6 1674 aa28.1■■■□□ 2.09
MUC1-202ENST00000338684 PDS5BQ9NTI5 1447 aa28.09■■■□□ 2.09
MUC1-202ENST00000338684 CADPSQ9ULU8 1353 aa28.09■■■□□ 2.09
MUC1-202ENST00000338684 RSF1Q96T23 1441 aaPredicted RBP27.96■■■□□ 2.07
MUC1-202ENST00000338684 MRC2Q9UBG0 1479 aa27.85■■■□□ 2.05
MUC1-202ENST00000338684 WDR62O43379 1518 aa27.78■■■□□ 2.04
MUC1-202ENST00000338684 TOP2AP11388 1531 aaKnown RBP27.77■■■□□ 2.04
MUC1-202ENST00000338684 CFTRP13569 1480 aa27.76■■■□□ 2.03
MUC1-202ENST00000338684 FANCD2Q9BXW9 1451 aa27.74■■■□□ 2.03
MUC1-202ENST00000338684 CEP164Q9UPV0 1460 aa27.74■■■□□ 2.03
MUC1-202ENST00000338684 URB2Q14146 1524 aaKnown RBP27.55■■■□□ 2
MUC1-202ENST00000338684 CCDC88BA6NC98 1476 aa27.52■■■□□ 2
MUC1-202ENST00000338684 PRDM2Q13029 1718 aa27.38■■□□□ 1.97
MUC1-202ENST00000338684 TRIM41Q8WV44 630 aa27.34■■□□□ 1.97
MUC1-202ENST00000338684 OSCARQ8IYS5 282 aa27.3■■□□□ 1.96
MUC1-202ENST00000338684 TOPBP1Q92547 1522 aa27.23■■□□□ 1.95
MUC1-202ENST00000338684 ZNF608Q9ULD9 1512 aaPredicted RBP27.22■■□□□ 1.95
MUC1-202ENST00000338684 IFT140Q96RY7 1462 aa27.19■■□□□ 1.94
MUC1-202ENST00000338684 ABCC8Q09428 1581 aa27.1■■□□□ 1.93
MUC1-202ENST00000338684 DNMBPQ6XZF7 1577 aa27.09■■□□□ 1.93
MUC1-202ENST00000338684 EIF4G3O43432 1585 aaKnown RBP26.99■■□□□ 1.91
MUC1-202ENST00000338684 AQRO60306 1485 aaKnown RBP eCLIP26.99■■□□□ 1.91
MUC1-202ENST00000338684 TARBP1Q13395 1621 aaKnown RBP26.98■■□□□ 1.91
MUC1-202ENST00000338684 POLA1P09884 1462 aaPredicted RBP26.95■■□□□ 1.91
MUC1-202ENST00000338684 RAD54L2Q9Y4B4 1467 aa26.91■■□□□ 1.9
MUC1-202ENST00000338684 RIMBP3CA6NJZ7 1639 aa26.9■■□□□ 1.9
MUC1-202ENST00000338684 RIMBP3BA6NNM3 1639 aa26.9■■□□□ 1.9
MUC1-202ENST00000338684 RIMBP3Q9UFD9 1639 aa26.9■■□□□ 1.9
MUC1-202ENST00000338684 SOGA1O94964 1423 aa26.85■■□□□ 1.89
MUC1-202ENST00000338684 TDRD9Q8NDG6 1382 aaKnown RBP26.84■■□□□ 1.89
MUC1-202ENST00000338684 ARHGEF11O15085 1522 aa26.82■■□□□ 1.88
MUC1-202ENST00000338684 CHD1O14646 1710 aa26.79■■□□□ 1.88
MUC1-202ENST00000338684 FBLN2P98095 1184 aa26.79■■□□□ 1.88
MUC1-202ENST00000338684 FGD5Q6ZNL6 1462 aa26.79■■□□□ 1.88
MUC1-202ENST00000338684 CUX1P39880 1505 aa26.79■■□□□ 1.88
MUC1-202ENST00000338684 SUPT5HO00267 1087 aaKnown RBP26.78■■□□□ 1.88
MUC1-202ENST00000338684 CYB5RLQ6IPT4 315 aa26.69■■□□□ 1.86
MUC1-202ENST00000338684 SNAPC4Q5SXM2 1469 aa26.66■■□□□ 1.86
MUC1-202ENST00000338684 WDR97A6NE52 1622 aa26.6■■□□□ 1.85
MUC1-202ENST00000338684 ARAP1Q96P48 1450 aa26.58■■□□□ 1.85
MUC1-202ENST00000338684 CHMP7Q8WUX9 453 aaPredicted RBP26.58■■□□□ 1.85
MUC1-202ENST00000338684 GRIN2BQ13224 1484 aa26.57■■□□□ 1.84
MUC1-202ENST00000338684 MAGI1Q96QZ7 1491 aaPredicted RBP26.55■■□□□ 1.84
MUC1-202ENST00000338684 CLASP1Q7Z460 1538 aa26.5■■□□□ 1.83
MUC1-202ENST00000338684 GAPVD1Q14C86 1478 aa26.5■■□□□ 1.83
MUC1-202ENST00000338684 SYNJ2O15056 1496 aa26.48■■□□□ 1.83
MUC1-202ENST00000338684 ABCA10Q8WWZ4 1543 aa26.47■■□□□ 1.83
MUC1-202ENST00000338684 SYNJ1O43426 1573 aa26.44■■□□□ 1.82
MUC1-202ENST00000338684 PBRM1Q86U86 1689 aa26.44■■□□□ 1.82
MUC1-202ENST00000338684 ABCA5Q8WWZ7 1642 aa26.41■■□□□ 1.82
MUC1-202ENST00000338684 WRNQ14191 1432 aaPredicted RBP eCLIP26.36■■□□□ 1.81
MUC1-202ENST00000338684 TRHP20396 242 aaPredicted RBP26.35■■□□□ 1.81
MUC1-202ENST00000338684 TOP2BQ02880 1626 aa26.32■■□□□ 1.8
MUC1-202ENST00000338684 BIVM-ERCC5R4GMW8 1640 aa26.3■■□□□ 1.8
MUC1-202ENST00000338684 GRIN2AQ12879 1464 aa26.23■■□□□ 1.79
MUC1-202ENST00000338684 ADAMTS12P58397 1594 aa26.2■■□□□ 1.79
MUC1-202ENST00000338684 ERCC6L2Q5T890 1561 aa26.16■■□□□ 1.78
MUC1-202ENST00000338684 NUP160Q12769 1436 aa26.16■■□□□ 1.78
MUC1-202ENST00000338684 CEP170Q5SW79 1584 aa26.16■■□□□ 1.78
MUC1-202ENST00000338684 FHAD1B1AJZ9 1412 aa26.15■■□□□ 1.78
MUC1-202ENST00000338684 ERICH3Q5RHP9 1530 aa26.11■■□□□ 1.77
MUC1-202ENST00000338684 SHROOM2Q13796 1616 aa26.02■■□□□ 1.76
MUC1-202ENST00000338684 JPH4Q96JJ6 628 aa25.95■■□□□ 1.74
MUC1-202ENST00000338684 PRG4Q92954 1404 aaPredicted RBP25.92■■□□□ 1.74
MUC1-202ENST00000338684 IGF1RP08069 1367 aa25.88■■□□□ 1.73
MUC1-202ENST00000338684 RUSC2Q8N2Y8 1516 aa25.83■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms