Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC21■□□□□ 0.95
SHANK2Q9UPX8 FUK-207ENST00000571514 3054 ntTSL 2 BASIC21■□□□□ 0.95
SHANK2Q9UPX8 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC21■□□□□ 0.95
SHANK2Q9UPX8 ENPP7P8-202ENST00000527856 1345 ntBASIC21■□□□□ 0.95
SHANK2Q9UPX8 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC21■□□□□ 0.95
SHANK2Q9UPX8 USP39-207ENST00000450066 2086 ntTSL 2 BASIC21■□□□□ 0.95
SHANK2Q9UPX8 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SHANK2Q9UPX8 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC21■□□□□ 0.95
SHANK2Q9UPX8 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
SHANK2Q9UPX8 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC21■□□□□ 0.95
SHANK2Q9UPX8 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SHANK2Q9UPX8 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC21■□□□□ 0.95
SHANK2Q9UPX8 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SHANK2Q9UPX8 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SHANK2Q9UPX8 SURF4-203ENST00000371991 715 ntTSL 3 BASIC21■□□□□ 0.95
SHANK2Q9UPX8 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
SHANK2Q9UPX8 AC005722.1-201ENST00000431878 964 ntBASIC21■□□□□ 0.95
SHANK2Q9UPX8 AC026470.1-201ENST00000478038 846 ntBASIC21■□□□□ 0.95
SHANK2Q9UPX8 RN7SL582P-201ENST00000491078 279 ntBASIC21■□□□□ 0.95
SHANK2Q9UPX8 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC21■□□□□ 0.95
SHANK2Q9UPX8 CES1P2-201ENST00000566467 1242 ntBASIC21■□□□□ 0.95
SHANK2Q9UPX8 AC010632.2-201ENST00000588369 1224 ntBASIC21■□□□□ 0.95
SHANK2Q9UPX8 AC026336.4-201ENST00000624565 1050 ntBASIC21■□□□□ 0.95
SHANK2Q9UPX8 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SHANK2Q9UPX8 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SHANK2Q9UPX8 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SHANK2Q9UPX8 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SHANK2Q9UPX8 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SHANK2Q9UPX8 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
SHANK2Q9UPX8 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHANK2Q9UPX8 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC20.99■□□□□ 0.95
SHANK2Q9UPX8 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHANK2Q9UPX8 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SHANK2Q9UPX8 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SHANK2Q9UPX8 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
SHANK2Q9UPX8 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHANK2Q9UPX8 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SHANK2Q9UPX8 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
SHANK2Q9UPX8 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC20.99■□□□□ 0.95
SHANK2Q9UPX8 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHANK2Q9UPX8 DKKL1P1-201ENST00000400550 698 ntBASIC20.99■□□□□ 0.95
SHANK2Q9UPX8 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC20.99■□□□□ 0.95
SHANK2Q9UPX8 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC20.99■□□□□ 0.95
SHANK2Q9UPX8 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC20.99■□□□□ 0.95
SHANK2Q9UPX8 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
SHANK2Q9UPX8 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC20.99■□□□□ 0.95
SHANK2Q9UPX8 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC20.99■□□□□ 0.95
SHANK2Q9UPX8 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.99■□□□□ 0.95
SHANK2Q9UPX8 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHANK2Q9UPX8 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC20.99■□□□□ 0.95
SHANK2Q9UPX8 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHANK2Q9UPX8 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHANK2Q9UPX8 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHANK2Q9UPX8 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SHANK2Q9UPX8 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC20.99■□□□□ 0.95
SHANK2Q9UPX8 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SHANK2Q9UPX8 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC20.99■□□□□ 0.95
SHANK2Q9UPX8 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC20.99■□□□□ 0.95
SHANK2Q9UPX8 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SHANK2Q9UPX8 AC012617.1-204ENST00000586340 2305 ntBASIC20.99■□□□□ 0.95
SHANK2Q9UPX8 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SHANK2Q9UPX8 AL109809.1-201ENST00000418979 1367 ntBASIC20.98■□□□□ 0.95
SHANK2Q9UPX8 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC20.98■□□□□ 0.95
SHANK2Q9UPX8 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
SHANK2Q9UPX8 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SHANK2Q9UPX8 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SHANK2Q9UPX8 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SHANK2Q9UPX8 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SHANK2Q9UPX8 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC20.98■□□□□ 0.95
SHANK2Q9UPX8 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC20.98■□□□□ 0.95
SHANK2Q9UPX8 AC140479.7-201ENST00000636301 2332 ntBASIC20.98■□□□□ 0.95
SHANK2Q9UPX8 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SHANK2Q9UPX8 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SHANK2Q9UPX8 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC20.98■□□□□ 0.95
SHANK2Q9UPX8 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC20.98■□□□□ 0.95
SHANK2Q9UPX8 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC20.98■□□□□ 0.95
SHANK2Q9UPX8 AC087203.1-201ENST00000532111 1181 ntBASIC20.98■□□□□ 0.95
SHANK2Q9UPX8 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC20.98■□□□□ 0.95
SHANK2Q9UPX8 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SHANK2Q9UPX8 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC20.98■□□□□ 0.95
SHANK2Q9UPX8 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SHANK2Q9UPX8 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
SHANK2Q9UPX8 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
SHANK2Q9UPX8 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SHANK2Q9UPX8 AC092115.1-201ENST00000566277 1402 ntBASIC20.98■□□□□ 0.95
SHANK2Q9UPX8 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHANK2Q9UPX8 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHANK2Q9UPX8 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHANK2Q9UPX8 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SHANK2Q9UPX8 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHANK2Q9UPX8 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SHANK2Q9UPX8 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SHANK2Q9UPX8 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC20.97■□□□□ 0.95
SHANK2Q9UPX8 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
SHANK2Q9UPX8 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
SHANK2Q9UPX8 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHANK2Q9UPX8 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
SHANK2Q9UPX8 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SHANK2Q9UPX8 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SHANK2Q9UPX8 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms