Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 AL355102.3-201ENST00000554299 1678 ntBASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 KRT8P12-202ENST00000472924 1397 ntBASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 HCG4P8-203ENST00000443049 980 ntBASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 RN7SL589P-201ENST00000481268 310 ntBASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 IGHV3-62-201ENST00000520057 340 ntBASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 SLC25A39P2-201ENST00000537614 270 ntBASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 KDM6A-214ENST00000621147 2876 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 AC060814.4-201ENST00000594169 2163 ntBASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SEC22CQ9BRL7 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 AL391647.1-201ENST00000395664 511 ntBASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 KRT18P2-201ENST00000447938 1258 ntBASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 IGHV3OR16-6-201ENST00000568775 360 ntBASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 AC064836.3-201ENST00000607928 673 ntBASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 AL513190.1-201ENST00000621254 727 ntBASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 AC116407.3-201ENST00000623905 1129 ntBASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SEC22CQ9BRL7 FAM102A-202ENST00000373084 3352 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms