Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 GGTLC4P-201ENST00000402176 664 ntBASIC16.88■□□□□ 0.29
COL4A5P29400 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL4A5P29400 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC16.88■□□□□ 0.29
COL4A5P29400 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC16.88■□□□□ 0.29
COL4A5P29400 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC16.88■□□□□ 0.29
COL4A5P29400 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC16.88■□□□□ 0.29
COL4A5P29400 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC16.88■□□□□ 0.29
COL4A5P29400 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL4A5P29400 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL4A5P29400 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL4A5P29400 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL4A5P29400 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
COL4A5P29400 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL4A5P29400 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
COL4A5P29400 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL4A5P29400 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC16.88■□□□□ 0.29
COL4A5P29400 AL050341.2-201ENST00000567508 1541 ntBASIC16.88■□□□□ 0.29
COL4A5P29400 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.88■□□□□ 0.29
COL4A5P29400 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL4A5P29400 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL4A5P29400 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL4A5P29400 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL4A5P29400 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
COL4A5P29400 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL4A5P29400 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC16.88■□□□□ 0.29
COL4A5P29400 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL4A5P29400 RNU1-80P-201ENST00000459500 161 ntBASIC16.88■□□□□ 0.29
COL4A5P29400 TBC1D3P6-201ENST00000505954 962 ntBASIC16.88■□□□□ 0.29
COL4A5P29400 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC16.88■□□□□ 0.29
COL4A5P29400 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC16.88■□□□□ 0.29
COL4A5P29400 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC16.88■□□□□ 0.29
COL4A5P29400 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL4A5P29400 AC016582.2-202ENST00000587765 1094 ntBASIC16.88■□□□□ 0.29
COL4A5P29400 PHF23-213ENST00000613632 850 ntTSL 5 BASIC16.88■□□□□ 0.29
COL4A5P29400 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL4A5P29400 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL4A5P29400 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL4A5P29400 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COL4A5P29400 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
COL4A5P29400 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC16.87■□□□□ 0.29
COL4A5P29400 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL4A5P29400 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.87■□□□□ 0.29
COL4A5P29400 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL4A5P29400 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL4A5P29400 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.87■□□□□ 0.29
COL4A5P29400 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL4A5P29400 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
COL4A5P29400 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.87■□□□□ 0.29
COL4A5P29400 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
COL4A5P29400 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL4A5P29400 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL4A5P29400 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL4A5P29400 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC16.87■□□□□ 0.29
COL4A5P29400 DPY19L2P4-201ENST00000479881 442 ntBASIC16.87■□□□□ 0.29
COL4A5P29400 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC16.87■□□□□ 0.29
COL4A5P29400 MIR8071-1-201ENST00000616769 65 ntBASIC16.87■□□□□ 0.29
COL4A5P29400 MIR8071-2-201ENST00000616772 65 ntBASIC16.87■□□□□ 0.29
COL4A5P29400 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL4A5P29400 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL4A5P29400 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL4A5P29400 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL4A5P29400 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL4A5P29400 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COL4A5P29400 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
COL4A5P29400 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL4A5P29400 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COL4A5P29400 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL4A5P29400 AC132872.4-202ENST00000622924 2756 ntBASIC16.86■□□□□ 0.29
COL4A5P29400 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
COL4A5P29400 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
COL4A5P29400 RPL10-203ENST00000406022 748 ntTSL 3 BASIC16.86■□□□□ 0.29
COL4A5P29400 PSME2P2-201ENST00000453033 700 ntBASIC16.86■□□□□ 0.29
COL4A5P29400 ALG1L15P-201ENST00000482834 794 ntBASIC16.86■□□□□ 0.29
COL4A5P29400 AC147876.1-201ENST00000504408 322 ntBASIC16.86■□□□□ 0.29
COL4A5P29400 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC16.86■□□□□ 0.29
COL4A5P29400 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC16.86■□□□□ 0.29
COL4A5P29400 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC16.86■□□□□ 0.29
COL4A5P29400 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
COL4A5P29400 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
COL4A5P29400 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL4A5P29400 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC16.86■□□□□ 0.29
COL4A5P29400 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC16.86■□□□□ 0.29
COL4A5P29400 TCAF2P1-201ENST00000291129 2421 ntBASIC16.86■□□□□ 0.29
COL4A5P29400 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL4A5P29400 DDC-204ENST00000426377 1700 ntTSL 3 BASIC16.86■□□□□ 0.29
COL4A5P29400 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COL4A5P29400 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL4A5P29400 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
COL4A5P29400 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
COL4A5P29400 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
COL4A5P29400 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC16.85■□□□□ 0.29
COL4A5P29400 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL4A5P29400 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL4A5P29400 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL4A5P29400 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC16.85■□□□□ 0.29
COL4A5P29400 RPL14-203ENST00000416518 812 ntTSL 3 BASIC16.85■□□□□ 0.29
COL4A5P29400 MAGEA7P-201ENST00000436482 942 ntBASIC16.85■□□□□ 0.29
COL4A5P29400 HNRNPA1P10-201ENST00000444945 962 ntBASIC16.85■□□□□ 0.29
COL4A5P29400 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC16.85■□□□□ 0.29
COL4A5P29400 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms