Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB3BP20337 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC12.84□□□□□ -0.35
RAB3BP20337 AL138828.2-201ENST00000615812 383 ntBASIC12.84□□□□□ -0.35
RAB3BP20337 NME4-212ENST00000621774 904 ntTSL 3 BASIC12.84□□□□□ -0.35
RAB3BP20337 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB3BP20337 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB3BP20337 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB3BP20337 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.84□□□□□ -0.35
RAB3BP20337 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB3BP20337 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB3BP20337 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.84□□□□□ -0.35
RAB3BP20337 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB3BP20337 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB3BP20337 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB3BP20337 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
RAB3BP20337 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB3BP20337 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB3BP20337 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
RAB3BP20337 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.84□□□□□ -0.35
RAB3BP20337 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RAB3BP20337 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.84□□□□□ -0.35
RAB3BP20337 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RAB3BP20337 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.84□□□□□ -0.35
RAB3BP20337 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB3BP20337 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB3BP20337 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB3BP20337 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.35
RAB3BP20337 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC12.83□□□□□ -0.35
RAB3BP20337 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
RAB3BP20337 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
RAB3BP20337 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.83□□□□□ -0.35
RAB3BP20337 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
RAB3BP20337 AC135782.3-201ENST00000562782 2105 ntBASIC12.83□□□□□ -0.35
RAB3BP20337 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
RAB3BP20337 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
RAB3BP20337 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
RAB3BP20337 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RAB3BP20337 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
RAB3BP20337 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB3BP20337 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB3BP20337 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB3BP20337 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RAB3BP20337 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.83□□□□□ -0.36
RAB3BP20337 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB3BP20337 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB3BP20337 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB3BP20337 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RAB3BP20337 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RAB3BP20337 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.83□□□□□ -0.36
RAB3BP20337 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.83□□□□□ -0.36
RAB3BP20337 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB3BP20337 TEX30-205ENST00000376029 959 ntTSL 2 BASIC12.83□□□□□ -0.36
RAB3BP20337 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.83□□□□□ -0.36
RAB3BP20337 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.83□□□□□ -0.36
RAB3BP20337 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC12.83□□□□□ -0.36
RAB3BP20337 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB3BP20337 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
RAB3BP20337 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.83□□□□□ -0.36
RAB3BP20337 AC131206.1-201ENST00000538078 1211 ntBASIC12.83□□□□□ -0.36
RAB3BP20337 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
RAB3BP20337 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC12.83□□□□□ -0.36
RAB3BP20337 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC12.83□□□□□ -0.36
RAB3BP20337 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC12.83□□□□□ -0.36
RAB3BP20337 BX539320.1-201ENST00000623759 877 ntBASIC12.83□□□□□ -0.36
RAB3BP20337 AL603764.1-201ENST00000636452 321 ntBASIC12.83□□□□□ -0.36
RAB3BP20337 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RAB3BP20337 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
RAB3BP20337 KHSRPP1-201ENST00000427983 1768 ntBASIC12.83□□□□□ -0.36
RAB3BP20337 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RAB3BP20337 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC12.83□□□□□ -0.36
RAB3BP20337 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB3BP20337 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB3BP20337 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RAB3BP20337 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB3BP20337 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC12.83□□□□□ -0.36
RAB3BP20337 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB3BP20337 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
RAB3BP20337 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB3BP20337 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.83□□□□□ -0.36
RAB3BP20337 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB3BP20337 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC12.83□□□□□ -0.36
RAB3BP20337 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
RAB3BP20337 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB3BP20337 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB3BP20337 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.83□□□□□ -0.36
RAB3BP20337 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB3BP20337 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.83□□□□□ -0.36
RAB3BP20337 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RAB3BP20337 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
RAB3BP20337 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAB3BP20337 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
RAB3BP20337 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.82□□□□□ -0.36
RAB3BP20337 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB3BP20337 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
RAB3BP20337 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
RAB3BP20337 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
RAB3BP20337 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAB3BP20337 PCDHB18P-202ENST00000526308 3197 ntBASIC12.82□□□□□ -0.36
RAB3BP20337 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB3BP20337 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 369.6 ms