Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 AC013355.1-201ENST00000562625 723 ntBASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 BNIP3P13-201ENST00000599968 566 ntBASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 AC138696.2-201ENST00000607376 223 ntBASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 AC023090.2-201ENST00000625182 2110 ntBASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 SHC1P1-201ENST00000425230 1745 ntBASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 AL031595.1-201ENST00000623969 4709 ntBASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 E2F3P2-201ENST00000447755 1422 ntBASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 RN7SL769P-201ENST00000469386 295 ntBASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 RN7SL774P-201ENST00000577467 290 ntBASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 AC097724.1-201ENST00000609581 426 ntBASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 AC091812.3-201ENST00000621362 345 ntBASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 AL162426.1-201ENST00000624141 743 ntBASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA1Q9UND3 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms