Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 AC144831.1-201ENST00000573312 2656 ntBASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 AL590824.1-201ENST00000403828 1349 ntBASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 AC140479.7-201ENST00000636301 2332 ntBASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 SAT1-201ENST00000379251 801 ntTSL 2 BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 SAT1-202ENST00000379253 909 ntTSL 2 BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 SAT1-203ENST00000379254 868 ntTSL 3 BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 HMGA1P1-201ENST00000415560 1062 ntBASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 RN7SL767P-201ENST00000493013 295 ntBASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 TMCO5B-205ENST00000530020 894 ntBASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 CMC2-204ENST00000562713 573 ntTSL 3 BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 CMC2-209ENST00000565108 399 ntTSL 2 BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 NUDT4P2-201ENST00000578341 546 ntBASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 MIR4649-201ENST00000582839 64 ntBASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 AL021707.6-201ENST00000609212 491 ntBASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 AC006372.4-201ENST00000624122 1543 ntBASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SYNPO2Q9UMS6 AL122018.1-201ENST00000446607 2310 ntBASIC16.54■□□□□ 0.24
SYNPO2Q9UMS6 API5-208ENST00000531273 1868 ntTSL 2 BASIC16.54■□□□□ 0.24
SYNPO2Q9UMS6 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.54■□□□□ 0.24
SYNPO2Q9UMS6 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SYNPO2Q9UMS6 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SYNPO2Q9UMS6 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC16.54■□□□□ 0.24
SYNPO2Q9UMS6 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SYNPO2Q9UMS6 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC16.54■□□□□ 0.24
SYNPO2Q9UMS6 AP001267.2-201ENST00000532619 2086 ntBASIC16.54■□□□□ 0.24
SYNPO2Q9UMS6 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SYNPO2Q9UMS6 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SYNPO2Q9UMS6 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SYNPO2Q9UMS6 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SYNPO2Q9UMS6 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC16.54■□□□□ 0.24
SYNPO2Q9UMS6 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SYNPO2Q9UMS6 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC16.54■□□□□ 0.24
SYNPO2Q9UMS6 RPL17P11-201ENST00000417593 544 ntBASIC16.54■□□□□ 0.24
SYNPO2Q9UMS6 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC16.54■□□□□ 0.24
SYNPO2Q9UMS6 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC16.54■□□□□ 0.24
SYNPO2Q9UMS6 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC16.54■□□□□ 0.24
SYNPO2Q9UMS6 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC16.54■□□□□ 0.24
SYNPO2Q9UMS6 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC16.54■□□□□ 0.24
SYNPO2Q9UMS6 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC16.54■□□□□ 0.24
SYNPO2Q9UMS6 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SYNPO2Q9UMS6 AC135983.4-201ENST00000564116 1262 ntBASIC16.54■□□□□ 0.24
SYNPO2Q9UMS6 RN7SL455P-201ENST00000580629 282 ntBASIC16.54■□□□□ 0.24
SYNPO2Q9UMS6 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SYNPO2Q9UMS6 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SYNPO2Q9UMS6 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SYNPO2Q9UMS6 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms