Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDCA5Q96FF9 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CDCA5Q96FF9 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDCA5Q96FF9 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDCA5Q96FF9 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDCA5Q96FF9 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDCA5Q96FF9 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CDCA5Q96FF9 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.72■□□□□ 0.27
CDCA5Q96FF9 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDCA5Q96FF9 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDCA5Q96FF9 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDCA5Q96FF9 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDCA5Q96FF9 OR10N1P-201ENST00000392758 869 ntBASIC16.72■□□□□ 0.27
CDCA5Q96FF9 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDCA5Q96FF9 PGAM1P11-201ENST00000416729 680 ntBASIC16.72■□□□□ 0.27
CDCA5Q96FF9 FAM21EP-201ENST00000417804 985 ntBASIC16.72■□□□□ 0.27
CDCA5Q96FF9 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC16.72■□□□□ 0.27
CDCA5Q96FF9 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC16.72■□□□□ 0.27
CDCA5Q96FF9 SLC25A15P3-201ENST00000505530 290 ntBASIC16.72■□□□□ 0.27
CDCA5Q96FF9 HNRNPA1P56-201ENST00000505767 954 ntBASIC16.72■□□□□ 0.27
CDCA5Q96FF9 AC087203.1-201ENST00000532111 1181 ntBASIC16.72■□□□□ 0.27
CDCA5Q96FF9 SORD2P-201ENST00000558556 1069 ntBASIC16.72■□□□□ 0.27
CDCA5Q96FF9 RN7SL556P-201ENST00000582856 298 ntBASIC16.72■□□□□ 0.27
CDCA5Q96FF9 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDCA5Q96FF9 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC16.72■□□□□ 0.27
CDCA5Q96FF9 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC16.72■□□□□ 0.27
CDCA5Q96FF9 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC16.72■□□□□ 0.27
CDCA5Q96FF9 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CDCA5Q96FF9 AC139713.2-207ENST00000641556 1292 ntBASIC16.72■□□□□ 0.27
CDCA5Q96FF9 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDCA5Q96FF9 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDCA5Q96FF9 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDCA5Q96FF9 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDCA5Q96FF9 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.72■□□□□ 0.27
CDCA5Q96FF9 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC16.72■□□□□ 0.27
CDCA5Q96FF9 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDCA5Q96FF9 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.72■□□□□ 0.27
CDCA5Q96FF9 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDCA5Q96FF9 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.72■□□□□ 0.27
CDCA5Q96FF9 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDCA5Q96FF9 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDCA5Q96FF9 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDCA5Q96FF9 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
CDCA5Q96FF9 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CDCA5Q96FF9 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CDCA5Q96FF9 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDCA5Q96FF9 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.71■□□□□ 0.27
CDCA5Q96FF9 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDCA5Q96FF9 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDCA5Q96FF9 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDCA5Q96FF9 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDCA5Q96FF9 RPL3P2-204ENST00000413027 1203 ntBASIC16.71■□□□□ 0.27
CDCA5Q96FF9 NRADDP-201ENST00000437305 691 ntBASIC16.71■□□□□ 0.27
CDCA5Q96FF9 GOLGA6L16P-201ENST00000441780 1299 ntBASIC16.71■□□□□ 0.27
CDCA5Q96FF9 HNRNPA1P42-201ENST00000458678 957 ntBASIC16.71■□□□□ 0.27
CDCA5Q96FF9 RN7SL128P-201ENST00000467883 305 ntBASIC16.71■□□□□ 0.27
CDCA5Q96FF9 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDCA5Q96FF9 BCL2L12P1-201ENST00000508390 733 ntBASIC16.71■□□□□ 0.27
CDCA5Q96FF9 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDCA5Q96FF9 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC16.71■□□□□ 0.27
CDCA5Q96FF9 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC16.71■□□□□ 0.27
CDCA5Q96FF9 TYMSP2-201ENST00000589501 424 ntBASIC16.71■□□□□ 0.27
CDCA5Q96FF9 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC16.71■□□□□ 0.27
CDCA5Q96FF9 AC011462.4-201ENST00000616866 449 ntBASIC16.71■□□□□ 0.27
CDCA5Q96FF9 AC005274.1-201ENST00000623460 802 ntBASIC16.71■□□□□ 0.27
CDCA5Q96FF9 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.71■□□□□ 0.27
CDCA5Q96FF9 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC16.71■□□□□ 0.27
CDCA5Q96FF9 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDCA5Q96FF9 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.71■□□□□ 0.27
CDCA5Q96FF9 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDCA5Q96FF9 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDCA5Q96FF9 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDCA5Q96FF9 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CDCA5Q96FF9 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
CDCA5Q96FF9 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CDCA5Q96FF9 AL162727.3-201ENST00000635661 2787 ntBASIC16.71■□□□□ 0.26
CDCA5Q96FF9 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDCA5Q96FF9 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CDCA5Q96FF9 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDCA5Q96FF9 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.7■□□□□ 0.26
CDCA5Q96FF9 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDCA5Q96FF9 LINC00554-201ENST00000564841 3011 ntBASIC16.7■□□□□ 0.26
CDCA5Q96FF9 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
CDCA5Q96FF9 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDCA5Q96FF9 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDCA5Q96FF9 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDCA5Q96FF9 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDCA5Q96FF9 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDCA5Q96FF9 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CDCA5Q96FF9 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CDCA5Q96FF9 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDCA5Q96FF9 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDCA5Q96FF9 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDCA5Q96FF9 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CDCA5Q96FF9 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC16.7■□□□□ 0.26
CDCA5Q96FF9 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC16.7■□□□□ 0.26
CDCA5Q96FF9 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDCA5Q96FF9 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC16.7■□□□□ 0.26
CDCA5Q96FF9 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CDCA5Q96FF9 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms