RNA–Protein interactions for RNA: ENST00000458678.1

HNRNPA1P42-201, Transcript of heterogeneous nuclear ribonucleoprotein A1 pseudogene 42, humanhuman

BASIC

Gene HNRNPA1P42, Length 957 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPA1P42-201ENST00000458678 NISCHQ9Y2I1 1504 aa32.46■■■□□ 2.79
HNRNPA1P42-201ENST00000458678 ABCC9O60706 1549 aa30.04■■■□□ 2.4
HNRNPA1P42-201ENST00000458678 CCDC180Q9P1Z9 1646 aa29.31■■■□□ 2.28
HNRNPA1P42-201ENST00000458678 DNAJC5BQ9UF47 199 aa28.95■■■□□ 2.22
HNRNPA1P42-201ENST00000458678 RB1CC1Q8TDY2 1594 aa28.24■■■□□ 2.11
HNRNPA1P42-201ENST00000458678 PABPN1Q86U42 306 aaKnown RBP eCLIP27.95■■■□□ 2.06
HNRNPA1P42-201ENST00000458678 NACADO15069 1562 aa27.92■■■□□ 2.06
HNRNPA1P42-201ENST00000458678 DCAF8L2P0C7V8 631 aa27.72■■■□□ 2.03
HNRNPA1P42-201ENST00000458678 UNC13AQ9UPW8 1703 aa27.64■■■□□ 2.01
HNRNPA1P42-201ENST00000458678 BICRAQ9NZM4 1560 aa27.54■■■□□ 2
HNRNPA1P42-201ENST00000458678 MYO15BQ96JP2 1530 aa27.34■■□□□ 1.97
HNRNPA1P42-201ENST00000458678 CECR2Q9BXF3 1484 aa27.13■■□□□ 1.93
HNRNPA1P42-201ENST00000458678 CC2D2AQ9P2K1 1620 aa27.08■■□□□ 1.93
HNRNPA1P42-201ENST00000458678 DNAJC5Q9H3Z4 198 aa27.02■■□□□ 1.92
HNRNPA1P42-201ENST00000458678 SHROOM4Q9ULL8 1493 aa26.99■■□□□ 1.91
HNRNPA1P42-201ENST00000458678 EIF4G1Q04637 1599 aaKnown RBP26.86■■□□□ 1.89
HNRNPA1P42-201ENST00000458678 DCAF1Q9Y4B6 1507 aa26.75■■□□□ 1.87
HNRNPA1P42-201ENST00000458678 ZCCHC6Q5VYS8 1495 aaKnown RBP26.71■■□□□ 1.87
HNRNPA1P42-201ENST00000458678 SCRIBQ14160 1630 aa26.68■■□□□ 1.86
HNRNPA1P42-201ENST00000458678 CUX2O14529 1486 aa26.13■■□□□ 1.77
HNRNPA1P42-201ENST00000458678 AEBP2Q6ZN18 517 aaPredicted RBP25.94■■□□□ 1.74
HNRNPA1P42-201ENST00000458678 ERCC6Q03468 1493 aa25.92■■□□□ 1.74
HNRNPA1P42-201ENST00000458678 NCAPD3P42695 1498 aa25.85■■□□□ 1.73
HNRNPA1P42-201ENST00000458678 CHIC1Q5VXU3 224 aa25.69■■□□□ 1.7
HNRNPA1P42-201ENST00000458678 ATAD2BQ9ULI0 1458 aa25.66■■□□□ 1.7
HNRNPA1P42-201ENST00000458678 NESP48681 1621 aa25.65■■□□□ 1.7
HNRNPA1P42-201ENST00000458678 HMGXB3Q12766 1538 aa25.51■■□□□ 1.67
HNRNPA1P42-201ENST00000458678 SMARCA2P51531 1590 aa25.48■■□□□ 1.67
HNRNPA1P42-201ENST00000458678 TRIM41Q8WV44 630 aa25.48■■□□□ 1.67
HNRNPA1P42-201ENST00000458678 THOC2Q8NI27 1593 aaKnown RBP25.44■■□□□ 1.66
HNRNPA1P42-201ENST00000458678 SMARCA4P51532 1647 aa25.41■■□□□ 1.66
HNRNPA1P42-201ENST00000458678 BAZ1BQ9UIG0 1483 aaKnown RBP25.32■■□□□ 1.64
HNRNPA1P42-201ENST00000458678 LAMC3Q9Y6N6 1575 aa25.29■■□□□ 1.64
HNRNPA1P42-201ENST00000458678 KIF21AQ7Z4S6 1674 aa25.23■■□□□ 1.63
HNRNPA1P42-201ENST00000458678 PDS5BQ9NTI5 1447 aa25.2■■□□□ 1.62
HNRNPA1P42-201ENST00000458678 PEG3Q9GZU2 1588 aa25.19■■□□□ 1.62
HNRNPA1P42-201ENST00000458678 BAZ1AQ9NRL2 1556 aaPredicted RBP25.17■■□□□ 1.62
HNRNPA1P42-201ENST00000458678 CADPSQ9ULU8 1353 aa25.04■■□□□ 1.6
HNRNPA1P42-201ENST00000458678 MROH2BQ7Z745 1585 aa25.01■■□□□ 1.59
HNRNPA1P42-201ENST00000458678 MRC2Q9UBG0 1479 aa25■■□□□ 1.59
HNRNPA1P42-201ENST00000458678 WDR62O43379 1518 aa24.96■■□□□ 1.59
HNRNPA1P42-201ENST00000458678 OSCARQ8IYS5 282 aa24.93■■□□□ 1.58
HNRNPA1P42-201ENST00000458678 CEP164Q9UPV0 1460 aa24.75■■□□□ 1.55
HNRNPA1P42-201ENST00000458678 FANCD2Q9BXW9 1451 aa24.7■■□□□ 1.55
HNRNPA1P42-201ENST00000458678 WIZO95785 1651 aa24.65■■□□□ 1.54
HNRNPA1P42-201ENST00000458678 CFTRP13569 1480 aa24.59■■□□□ 1.53
HNRNPA1P42-201ENST00000458678 RIMBP3CA6NJZ7 1639 aa24.58■■□□□ 1.53
HNRNPA1P42-201ENST00000458678 RIMBP3BA6NNM3 1639 aa24.58■■□□□ 1.53
HNRNPA1P42-201ENST00000458678 RIMBP3Q9UFD9 1639 aa24.58■■□□□ 1.53
HNRNPA1P42-201ENST00000458678 URB2Q14146 1524 aaKnown RBP24.56■■□□□ 1.52
HNRNPA1P42-201ENST00000458678 ARHGEF11O15085 1522 aa24.45■■□□□ 1.5
HNRNPA1P42-201ENST00000458678 CYB5RLQ6IPT4 315 aa24.4■■□□□ 1.5
HNRNPA1P42-201ENST00000458678 ZNF608Q9ULD9 1512 aaPredicted RBP24.39■■□□□ 1.49
HNRNPA1P42-201ENST00000458678 IFT140Q96RY7 1462 aa24.31■■□□□ 1.48
HNRNPA1P42-201ENST00000458678 RSF1Q96T23 1441 aaPredicted RBP24.28■■□□□ 1.48
HNRNPA1P42-201ENST00000458678 TRHP20396 242 aaPredicted RBP24.28■■□□□ 1.48
HNRNPA1P42-201ENST00000458678 TOP2AP11388 1531 aaKnown RBP24.25■■□□□ 1.47
HNRNPA1P42-201ENST00000458678 ARAP1Q96P48 1450 aa24.18■■□□□ 1.46
HNRNPA1P42-201ENST00000458678 PRDM2Q13029 1718 aa24.17■■□□□ 1.46
HNRNPA1P42-201ENST00000458678 TOPBP1Q92547 1522 aa24.16■■□□□ 1.46
HNRNPA1P42-201ENST00000458678 EIF4G3O43432 1585 aaKnown RBP24.12■■□□□ 1.45
HNRNPA1P42-201ENST00000458678 AQRO60306 1485 aaKnown RBP eCLIP24.1■■□□□ 1.45
HNRNPA1P42-201ENST00000458678 CCDC88BA6NC98 1476 aa24.07■■□□□ 1.44
HNRNPA1P42-201ENST00000458678 CHD1O14646 1710 aa24.07■■□□□ 1.44
HNRNPA1P42-201ENST00000458678 ABCC8Q09428 1581 aa24.05■■□□□ 1.44
HNRNPA1P42-201ENST00000458678 FBLN2P98095 1184 aa24.05■■□□□ 1.44
HNRNPA1P42-201ENST00000458678 TARBP1Q13395 1621 aaKnown RBP24.01■■□□□ 1.43
HNRNPA1P42-201ENST00000458678 DNMBPQ6XZF7 1577 aa23.98■■□□□ 1.43
HNRNPA1P42-201ENST00000458678 POLA1P09884 1462 aaPredicted RBP23.87■■□□□ 1.41
HNRNPA1P42-201ENST00000458678 TDRD9Q8NDG6 1382 aaKnown RBP23.86■■□□□ 1.41
HNRNPA1P42-201ENST00000458678 RAD54L2Q9Y4B4 1467 aa23.84■■□□□ 1.41
HNRNPA1P42-201ENST00000458678 CLASP1Q7Z460 1538 aa23.82■■□□□ 1.4
HNRNPA1P42-201ENST00000458678 SOGA1O94964 1423 aa23.79■■□□□ 1.4
HNRNPA1P42-201ENST00000458678 CHMP7Q8WUX9 453 aaPredicted RBP23.77■■□□□ 1.4
HNRNPA1P42-201ENST00000458678 SNAPC4Q5SXM2 1469 aa23.75■■□□□ 1.39
HNRNPA1P42-201ENST00000458678 SYNJ1O43426 1573 aa23.69■■□□□ 1.38
HNRNPA1P42-201ENST00000458678 MAGI1Q96QZ7 1491 aaPredicted RBP23.66■■□□□ 1.38
HNRNPA1P42-201ENST00000458678 GAPVD1Q14C86 1478 aa23.63■■□□□ 1.37
HNRNPA1P42-201ENST00000458678 WDR97A6NE52 1622 aa23.63■■□□□ 1.37
HNRNPA1P42-201ENST00000458678 SYNJ2O15056 1496 aa23.62■■□□□ 1.37
HNRNPA1P42-201ENST00000458678 GRIN2BQ13224 1484 aa23.62■■□□□ 1.37
HNRNPA1P42-201ENST00000458678 FGD5Q6ZNL6 1462 aa23.62■■□□□ 1.37
HNRNPA1P42-201ENST00000458678 CUX1P39880 1505 aa23.52■■□□□ 1.36
HNRNPA1P42-201ENST00000458678 ERCC6L2Q5T890 1561 aa23.44■■□□□ 1.34
HNRNPA1P42-201ENST00000458678 PBRM1Q86U86 1689 aa23.41■■□□□ 1.34
HNRNPA1P42-201ENST00000458678 ABCA10Q8WWZ4 1543 aa23.33■■□□□ 1.32
HNRNPA1P42-201ENST00000458678 ABCA5Q8WWZ7 1642 aa23.31■■□□□ 1.32
HNRNPA1P42-201ENST00000458678 CEP170Q5SW79 1584 aa23.31■■□□□ 1.32
HNRNPA1P42-201ENST00000458678 GRIN2AQ12879 1464 aa23.3■■□□□ 1.32
HNRNPA1P42-201ENST00000458678 KIF13AQ9H1H9 1805 aa23.29■■□□□ 1.32
HNRNPA1P42-201ENST00000458678 NUP160Q12769 1436 aa23.29■■□□□ 1.32
HNRNPA1P42-201ENST00000458678 SHROOM2Q13796 1616 aa23.22■■□□□ 1.31
HNRNPA1P42-201ENST00000458678 KDM4FA0A1W2PPD8 638 aa23.18■■□□□ 1.3
HNRNPA1P42-201ENST00000458678 ADAMTS12P58397 1594 aa23.16■■□□□ 1.3
HNRNPA1P42-201ENST00000458678 FAM69CQ0P6D2 419 aa23.16■■□□□ 1.3
HNRNPA1P42-201ENST00000458678 ILDR1Q86SU0 546 aaPredicted RBP23.13■■□□□ 1.29
HNRNPA1P42-201ENST00000458678 FHAD1B1AJZ9 1412 aa23.13■■□□□ 1.29
HNRNPA1P42-201ENST00000458678 PRG4Q92954 1404 aaPredicted RBP23.12■■□□□ 1.29
HNRNPA1P42-201ENST00000458678 WRNQ14191 1432 aaPredicted RBP eCLIP23.11■■□□□ 1.29
HNRNPA1P42-201ENST00000458678 JPH4Q96JJ6 628 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms