Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
SEC61A1P61619 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SEC61A1P61619 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SEC61A1P61619 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SEC61A1P61619 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.89□□□□□ -0.35
SEC61A1P61619 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.89□□□□□ -0.35
SEC61A1P61619 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SEC61A1P61619 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
SEC61A1P61619 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.89□□□□□ -0.35
SEC61A1P61619 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SEC61A1P61619 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SEC61A1P61619 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
SEC61A1P61619 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.89□□□□□ -0.35
SEC61A1P61619 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SEC61A1P61619 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SEC61A1P61619 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC12.89□□□□□ -0.35
SEC61A1P61619 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
SEC61A1P61619 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SEC61A1P61619 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC12.89□□□□□ -0.35
SEC61A1P61619 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SEC61A1P61619 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SEC61A1P61619 AC026410.3-201ENST00000514280 936 ntBASIC12.89□□□□□ -0.35
SEC61A1P61619 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC12.89□□□□□ -0.35
SEC61A1P61619 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC12.89□□□□□ -0.35
SEC61A1P61619 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SEC61A1P61619 CLUHP6-201ENST00000580789 941 ntBASIC12.89□□□□□ -0.35
SEC61A1P61619 AC015936.2-201ENST00000593177 259 ntBASIC12.89□□□□□ -0.35
SEC61A1P61619 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
SEC61A1P61619 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC12.89□□□□□ -0.35
SEC61A1P61619 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
SEC61A1P61619 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC12.89□□□□□ -0.35
SEC61A1P61619 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SEC61A1P61619 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
SEC61A1P61619 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.89□□□□□ -0.35
SEC61A1P61619 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.89□□□□□ -0.35
SEC61A1P61619 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.89□□□□□ -0.35
SEC61A1P61619 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
SEC61A1P61619 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.89□□□□□ -0.35
SEC61A1P61619 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
SEC61A1P61619 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
SEC61A1P61619 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.89□□□□□ -0.35
SEC61A1P61619 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
SEC61A1P61619 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.89□□□□□ -0.35
SEC61A1P61619 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SEC61A1P61619 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.89□□□□□ -0.35
SEC61A1P61619 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
SEC61A1P61619 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
SEC61A1P61619 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
SEC61A1P61619 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.89□□□□□ -0.35
SEC61A1P61619 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SEC61A1P61619 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
SEC61A1P61619 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
SEC61A1P61619 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SEC61A1P61619 AC018442.1-201ENST00000421439 2061 ntBASIC12.89□□□□□ -0.35
SEC61A1P61619 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SEC61A1P61619 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SEC61A1P61619 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SEC61A1P61619 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.88□□□□□ -0.35
SEC61A1P61619 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SEC61A1P61619 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
SEC61A1P61619 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SEC61A1P61619 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SEC61A1P61619 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SEC61A1P61619 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SEC61A1P61619 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.88□□□□□ -0.35
SEC61A1P61619 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.88□□□□□ -0.35
SEC61A1P61619 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SEC61A1P61619 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SEC61A1P61619 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SEC61A1P61619 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SEC61A1P61619 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SEC61A1P61619 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC12.88□□□□□ -0.35
SEC61A1P61619 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.88□□□□□ -0.35
SEC61A1P61619 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
SEC61A1P61619 HIST1H2BPS3-201ENST00000419683 341 ntBASIC12.88□□□□□ -0.35
SEC61A1P61619 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC12.88□□□□□ -0.35
SEC61A1P61619 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.88□□□□□ -0.35
SEC61A1P61619 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SEC61A1P61619 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SEC61A1P61619 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
SEC61A1P61619 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.88□□□□□ -0.35
SEC61A1P61619 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC12.88□□□□□ -0.35
SEC61A1P61619 ORC6-206ENST00000568364 888 ntTSL 5 BASIC12.88□□□□□ -0.35
SEC61A1P61619 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC12.88□□□□□ -0.35
SEC61A1P61619 AL512343.1-201ENST00000605837 169 ntBASIC12.88□□□□□ -0.35
SEC61A1P61619 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SEC61A1P61619 AC018665.1-201ENST00000622927 1362 ntBASIC12.88□□□□□ -0.35
SEC61A1P61619 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
SEC61A1P61619 AC012508.2-201ENST00000567613 1472 ntBASIC12.88□□□□□ -0.35
SEC61A1P61619 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SEC61A1P61619 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
SEC61A1P61619 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SEC61A1P61619 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SEC61A1P61619 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SEC61A1P61619 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SEC61A1P61619 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SEC61A1P61619 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SEC61A1P61619 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SEC61A1P61619 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
SEC61A1P61619 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms