Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
HMG20BQ9P0W2 USP28-214ENST00000545540 3431 ntTSL 2 BASIC17.7■□□□□ 0.42
HMG20BQ9P0W2 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMG20BQ9P0W2 AL136379.1-201ENST00000623471 2642 ntBASIC17.7■□□□□ 0.42
HMG20BQ9P0W2 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMG20BQ9P0W2 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC17.7■□□□□ 0.42
HMG20BQ9P0W2 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMG20BQ9P0W2 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
HMG20BQ9P0W2 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HMG20BQ9P0W2 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HMG20BQ9P0W2 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
HMG20BQ9P0W2 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC17.7■□□□□ 0.42
HMG20BQ9P0W2 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMG20BQ9P0W2 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HMG20BQ9P0W2 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC17.7■□□□□ 0.42
HMG20BQ9P0W2 PDIA3P2-201ENST00000428073 158 ntBASIC17.7■□□□□ 0.42
HMG20BQ9P0W2 ST13P19-201ENST00000442505 1124 ntBASIC17.7■□□□□ 0.42
HMG20BQ9P0W2 AL133466.1-201ENST00000447582 150 ntBASIC17.7■□□□□ 0.42
HMG20BQ9P0W2 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC17.7■□□□□ 0.42
HMG20BQ9P0W2 UPF3AP2-201ENST00000457924 1132 ntBASIC17.7■□□□□ 0.42
HMG20BQ9P0W2 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC17.7■□□□□ 0.42
HMG20BQ9P0W2 AC027237.1-201ENST00000560942 655 ntBASIC17.7■□□□□ 0.42
HMG20BQ9P0W2 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC17.7■□□□□ 0.42
HMG20BQ9P0W2 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC17.7■□□□□ 0.42
HMG20BQ9P0W2 AC106872.11-201ENST00000605838 421 ntBASIC17.7■□□□□ 0.42
HMG20BQ9P0W2 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC17.7■□□□□ 0.42
HMG20BQ9P0W2 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
HMG20BQ9P0W2 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMG20BQ9P0W2 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HMG20BQ9P0W2 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
HMG20BQ9P0W2 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC17.7■□□□□ 0.42
HMG20BQ9P0W2 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMG20BQ9P0W2 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC17.7■□□□□ 0.42
HMG20BQ9P0W2 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HMG20BQ9P0W2 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HMG20BQ9P0W2 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMG20BQ9P0W2 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HMG20BQ9P0W2 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
HMG20BQ9P0W2 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMG20BQ9P0W2 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMG20BQ9P0W2 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
HMG20BQ9P0W2 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC17.69■□□□□ 0.42
HMG20BQ9P0W2 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMG20BQ9P0W2 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMG20BQ9P0W2 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC17.69■□□□□ 0.42
HMG20BQ9P0W2 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HMG20BQ9P0W2 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMG20BQ9P0W2 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC17.69■□□□□ 0.42
HMG20BQ9P0W2 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
HMG20BQ9P0W2 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC17.69■□□□□ 0.42
HMG20BQ9P0W2 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC17.69■□□□□ 0.42
HMG20BQ9P0W2 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC17.69■□□□□ 0.42
HMG20BQ9P0W2 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HMG20BQ9P0W2 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
HMG20BQ9P0W2 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HMG20BQ9P0W2 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HMG20BQ9P0W2 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC17.69■□□□□ 0.42
HMG20BQ9P0W2 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC17.69■□□□□ 0.42
HMG20BQ9P0W2 AC073150.1-201ENST00000450406 1084 ntBASIC17.69■□□□□ 0.42
HMG20BQ9P0W2 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC17.69■□□□□ 0.42
HMG20BQ9P0W2 RN7SL720P-201ENST00000488178 304 ntBASIC17.69■□□□□ 0.42
HMG20BQ9P0W2 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC17.69■□□□□ 0.42
HMG20BQ9P0W2 RNA5SP423-201ENST00000517127 109 ntBASIC17.69■□□□□ 0.42
HMG20BQ9P0W2 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC17.69■□□□□ 0.42
HMG20BQ9P0W2 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC17.69■□□□□ 0.42
HMG20BQ9P0W2 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC17.69■□□□□ 0.42
HMG20BQ9P0W2 PGAM1P5-201ENST00000548011 764 ntBASIC17.69■□□□□ 0.42
HMG20BQ9P0W2 MEG3_2.1-201ENST00000611456 105 ntBASIC17.69■□□□□ 0.42
HMG20BQ9P0W2 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMG20BQ9P0W2 AC215219.1-201ENST00000400706 1817 ntBASIC17.69■□□□□ 0.42
HMG20BQ9P0W2 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMG20BQ9P0W2 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HMG20BQ9P0W2 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC17.69■□□□□ 0.42
HMG20BQ9P0W2 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMG20BQ9P0W2 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
HMG20BQ9P0W2 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMG20BQ9P0W2 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HMG20BQ9P0W2 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
HMG20BQ9P0W2 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMG20BQ9P0W2 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMG20BQ9P0W2 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMG20BQ9P0W2 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HMG20BQ9P0W2 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HMG20BQ9P0W2 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
HMG20BQ9P0W2 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
HMG20BQ9P0W2 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HMG20BQ9P0W2 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
HMG20BQ9P0W2 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HMG20BQ9P0W2 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMG20BQ9P0W2 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC17.68■□□□□ 0.42
HMG20BQ9P0W2 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC17.68■□□□□ 0.42
HMG20BQ9P0W2 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMG20BQ9P0W2 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
HMG20BQ9P0W2 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMG20BQ9P0W2 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
HMG20BQ9P0W2 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMG20BQ9P0W2 AC239868.1-201ENST00000369385 493 ntBASIC17.68■□□□□ 0.42
HMG20BQ9P0W2 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC17.68■□□□□ 0.42
HMG20BQ9P0W2 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMG20BQ9P0W2 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms