Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 AL035414.1-201ENST00000451327 857 ntBASIC12.96□□□□□ -0.33
MSR1P21757 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.96□□□□□ -0.33
MSR1P21757 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
MSR1P21757 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
MSR1P21757 AP000812.2-201ENST00000538934 718 ntBASIC12.96□□□□□ -0.33
MSR1P21757 SORD2P-201ENST00000558556 1069 ntBASIC12.96□□□□□ -0.33
MSR1P21757 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC12.96□□□□□ -0.33
MSR1P21757 AC106886.1-201ENST00000568660 600 ntBASIC12.96□□□□□ -0.33
MSR1P21757 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC12.96□□□□□ -0.33
MSR1P21757 AC008825.2-201ENST00000603374 718 ntBASIC12.96□□□□□ -0.33
MSR1P21757 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
MSR1P21757 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
MSR1P21757 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.96□□□□□ -0.33
MSR1P21757 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
MSR1P21757 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
MSR1P21757 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.96□□□□□ -0.34
MSR1P21757 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.96□□□□□ -0.34
MSR1P21757 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.96□□□□□ -0.34
MSR1P21757 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
MSR1P21757 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
MSR1P21757 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
MSR1P21757 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
MSR1P21757 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
MSR1P21757 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
MSR1P21757 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
MSR1P21757 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.96□□□□□ -0.34
MSR1P21757 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
MSR1P21757 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
MSR1P21757 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
MSR1P21757 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
MSR1P21757 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MSR1P21757 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MSR1P21757 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
MSR1P21757 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MSR1P21757 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
MSR1P21757 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
MSR1P21757 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
MSR1P21757 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MSR1P21757 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
MSR1P21757 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MSR1P21757 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MSR1P21757 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
MSR1P21757 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.95□□□□□ -0.34
MSR1P21757 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.95□□□□□ -0.34
MSR1P21757 PDIA3P1-201ENST00000471856 1510 ntBASIC12.95□□□□□ -0.34
MSR1P21757 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MSR1P21757 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MSR1P21757 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
MSR1P21757 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
MSR1P21757 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
MSR1P21757 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
MSR1P21757 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MSR1P21757 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
MSR1P21757 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC12.95□□□□□ -0.34
MSR1P21757 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC12.95□□□□□ -0.34
MSR1P21757 USB1-202ENST00000423271 1217 ntTSL 2 BASIC12.95□□□□□ -0.34
MSR1P21757 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.95□□□□□ -0.34
MSR1P21757 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC12.95□□□□□ -0.34
MSR1P21757 AL355994.2-201ENST00000447882 704 ntBASIC12.95□□□□□ -0.34
MSR1P21757 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MSR1P21757 GAPDHP21-201ENST00000450301 1010 ntBASIC12.95□□□□□ -0.34
MSR1P21757 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
MSR1P21757 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
MSR1P21757 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.95□□□□□ -0.34
MSR1P21757 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC12.95□□□□□ -0.34
MSR1P21757 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC12.95□□□□□ -0.34
MSR1P21757 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC12.95□□□□□ -0.34
MSR1P21757 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
MSR1P21757 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.95□□□□□ -0.34
MSR1P21757 AC079316.1-201ENST00000548397 411 ntBASIC12.95□□□□□ -0.34
MSR1P21757 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
MSR1P21757 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC12.95□□□□□ -0.34
MSR1P21757 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC12.95□□□□□ -0.34
MSR1P21757 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.95□□□□□ -0.34
MSR1P21757 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
MSR1P21757 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.95□□□□□ -0.34
MSR1P21757 AC136759.1-202ENST00000530858 2194 ntBASIC12.95□□□□□ -0.34
MSR1P21757 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
MSR1P21757 KRT8P4-201ENST00000509735 1454 ntBASIC12.95□□□□□ -0.34
MSR1P21757 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.95□□□□□ -0.34
MSR1P21757 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
MSR1P21757 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
MSR1P21757 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
MSR1P21757 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.95□□□□□ -0.34
MSR1P21757 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
MSR1P21757 AC009093.10-201ENST00000641956 1442 ntBASIC12.95□□□□□ -0.34
MSR1P21757 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
MSR1P21757 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MSR1P21757 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MSR1P21757 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MSR1P21757 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MSR1P21757 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.94□□□□□ -0.34
MSR1P21757 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MSR1P21757 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
MSR1P21757 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
MSR1P21757 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.94□□□□□ -0.34
MSR1P21757 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MSR1P21757 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MSR1P21757 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MSR1P21757 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms