Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.69□□□□□ -0.22
CTNSO60931 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
CTNSO60931 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTNSO60931 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTNSO60931 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTNSO60931 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.69□□□□□ -0.22
CTNSO60931 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.69□□□□□ -0.22
CTNSO60931 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CTNSO60931 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.69□□□□□ -0.22
CTNSO60931 MBLAC2-202ENST00000514906 1936 ntBASIC13.69□□□□□ -0.22
CTNSO60931 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.69□□□□□ -0.22
CTNSO60931 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CTNSO60931 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTNSO60931 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTNSO60931 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CTNSO60931 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.69□□□□□ -0.22
CTNSO60931 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTNSO60931 DPM3-202ENST00000368399 517 ntBASIC13.69□□□□□ -0.22
CTNSO60931 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CTNSO60931 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.69□□□□□ -0.22
CTNSO60931 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.69□□□□□ -0.22
CTNSO60931 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.69□□□□□ -0.22
CTNSO60931 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.69□□□□□ -0.22
CTNSO60931 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.69□□□□□ -0.22
CTNSO60931 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.69□□□□□ -0.22
CTNSO60931 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CTNSO60931 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC13.69□□□□□ -0.22
CTNSO60931 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13.69□□□□□ -0.22
CTNSO60931 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.69□□□□□ -0.22
CTNSO60931 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CTNSO60931 AL136295.7-201ENST00000619226 1200 ntBASIC13.69□□□□□ -0.22
CTNSO60931 AC133540.1-201ENST00000620845 1019 ntBASIC13.69□□□□□ -0.22
CTNSO60931 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
CTNSO60931 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTNSO60931 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
CTNSO60931 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTNSO60931 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTNSO60931 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTNSO60931 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTNSO60931 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CTNSO60931 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTNSO60931 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CTNSO60931 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC13.69□□□□□ -0.22
CTNSO60931 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
CTNSO60931 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTNSO60931 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.69□□□□□ -0.22
CTNSO60931 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.69□□□□□ -0.22
CTNSO60931 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.69□□□□□ -0.22
CTNSO60931 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.69□□□□□ -0.22
CTNSO60931 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTNSO60931 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.68□□□□□ -0.22
CTNSO60931 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CTNSO60931 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTNSO60931 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTNSO60931 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTNSO60931 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.68□□□□□ -0.22
CTNSO60931 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CTNSO60931 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTNSO60931 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTNSO60931 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CTNSO60931 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.68□□□□□ -0.22
CTNSO60931 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
CTNSO60931 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CTNSO60931 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTNSO60931 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.68□□□□□ -0.22
CTNSO60931 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTNSO60931 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.68□□□□□ -0.22
CTNSO60931 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTNSO60931 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CTNSO60931 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTNSO60931 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTNSO60931 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTNSO60931 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CTNSO60931 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
CTNSO60931 AL161932.2-201ENST00000435436 679 ntBASIC13.68□□□□□ -0.22
CTNSO60931 VDAC1P1-201ENST00000439229 848 ntBASIC13.68□□□□□ -0.22
CTNSO60931 AC006033.1-201ENST00000440505 426 ntBASIC13.68□□□□□ -0.22
CTNSO60931 AC104073.2-201ENST00000453737 312 ntBASIC13.68□□□□□ -0.22
CTNSO60931 AC006122.1-201ENST00000493323 440 ntBASIC13.68□□□□□ -0.22
CTNSO60931 HLA-J-204ENST00000495278 958 ntBASIC13.68□□□□□ -0.22
CTNSO60931 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.68□□□□□ -0.22
CTNSO60931 AC005740.2-201ENST00000511085 419 ntBASIC13.68□□□□□ -0.22
CTNSO60931 SCARNA21-201ENST00000517026 139 ntBASIC13.68□□□□□ -0.22
CTNSO60931 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
CTNSO60931 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CTNSO60931 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC13.68□□□□□ -0.22
CTNSO60931 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.68□□□□□ -0.22
CTNSO60931 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.68□□□□□ -0.22
CTNSO60931 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.68□□□□□ -0.22
CTNSO60931 AC068587.8-201ENST00000641239 219 ntBASIC13.68□□□□□ -0.22
CTNSO60931 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTNSO60931 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTNSO60931 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.68□□□□□ -0.22
CTNSO60931 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTNSO60931 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.68□□□□□ -0.22
CTNSO60931 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTNSO60931 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.68□□□□□ -0.22
CTNSO60931 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTNSO60931 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CTNSO60931 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms