Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
VPS33AQ96AX1 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
VPS33AQ96AX1 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS33AQ96AX1 LRRC59-203ENST00000576448 1531 ntBASIC14.13□□□□□ -0.15
VPS33AQ96AX1 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VPS33AQ96AX1 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS33AQ96AX1 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VPS33AQ96AX1 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
VPS33AQ96AX1 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.13□□□□□ -0.15
VPS33AQ96AX1 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS33AQ96AX1 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS33AQ96AX1 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS33AQ96AX1 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
VPS33AQ96AX1 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
VPS33AQ96AX1 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.13□□□□□ -0.15
VPS33AQ96AX1 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
VPS33AQ96AX1 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
VPS33AQ96AX1 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS33AQ96AX1 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC14.13□□□□□ -0.15
VPS33AQ96AX1 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.13□□□□□ -0.15
VPS33AQ96AX1 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VPS33AQ96AX1 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS33AQ96AX1 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
VPS33AQ96AX1 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 AL157996.1-201ENST00000624684 2299 ntBASIC14.12□□□□□ -0.15
VPS33AQ96AX1 AC090643.2-201ENST00000623442 2029 ntBASIC14.12□□□□□ -0.15
VPS33AQ96AX1 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 AC131206.1-201ENST00000538078 1211 ntBASIC14.12□□□□□ -0.15
VPS33AQ96AX1 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 AC124283.3-201ENST00000570869 594 ntBASIC14.12□□□□□ -0.15
VPS33AQ96AX1 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 MIR6074-201ENST00000612054 107 ntBASIC14.12□□□□□ -0.15
VPS33AQ96AX1 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 AGAP10P-201ENST00000454844 2418 ntBASIC14.12□□□□□ -0.15
VPS33AQ96AX1 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 KRT18P28-201ENST00000453838 1332 ntBASIC14.12□□□□□ -0.15
VPS33AQ96AX1 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS33AQ96AX1 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS33AQ96AX1 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms