Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CFAP43Q8NDM7 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CFAP43Q8NDM7 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CFAP43Q8NDM7 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC22.15■■□□□ 1.14
CFAP43Q8NDM7 HNRNPA1P42-201ENST00000458678 957 ntBASIC22.15■■□□□ 1.14
CFAP43Q8NDM7 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC22.15■■□□□ 1.14
CFAP43Q8NDM7 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
CFAP43Q8NDM7 EMC4-208ENST00000559078 599 ntTSL 3 BASIC22.15■■□□□ 1.14
CFAP43Q8NDM7 DUT-207ENST00000559416 635 ntTSL 2 BASIC22.15■■□□□ 1.14
CFAP43Q8NDM7 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC22.15■■□□□ 1.14
CFAP43Q8NDM7 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC22.15■■□□□ 1.14
CFAP43Q8NDM7 SKA2-205ENST00000580541 689 ntTSL 3 BASIC22.15■■□□□ 1.14
CFAP43Q8NDM7 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
CFAP43Q8NDM7 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC22.15■■□□□ 1.14
CFAP43Q8NDM7 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC22.15■■□□□ 1.14
CFAP43Q8NDM7 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CFAP43Q8NDM7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
CFAP43Q8NDM7 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CFAP43Q8NDM7 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC22.15■■□□□ 1.14
CFAP43Q8NDM7 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CFAP43Q8NDM7 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CFAP43Q8NDM7 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CFAP43Q8NDM7 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CFAP43Q8NDM7 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CFAP43Q8NDM7 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CFAP43Q8NDM7 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CFAP43Q8NDM7 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC22.15■■□□□ 1.14
CFAP43Q8NDM7 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CFAP43Q8NDM7 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CFAP43Q8NDM7 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
CFAP43Q8NDM7 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC22.14■■□□□ 1.14
CFAP43Q8NDM7 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
CFAP43Q8NDM7 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CFAP43Q8NDM7 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CFAP43Q8NDM7 SARS-202ENST00000369923 1882 ntTSL 5 BASIC22.14■■□□□ 1.14
CFAP43Q8NDM7 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
CFAP43Q8NDM7 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC22.14■■□□□ 1.14
CFAP43Q8NDM7 VENTXP3-201ENST00000546480 773 ntBASIC22.14■■□□□ 1.14
CFAP43Q8NDM7 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
CFAP43Q8NDM7 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC22.14■■□□□ 1.14
CFAP43Q8NDM7 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CFAP43Q8NDM7 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC22.14■■□□□ 1.14
CFAP43Q8NDM7 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
CFAP43Q8NDM7 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
CFAP43Q8NDM7 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CFAP43Q8NDM7 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC22.14■■□□□ 1.14
CFAP43Q8NDM7 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CFAP43Q8NDM7 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
CFAP43Q8NDM7 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CFAP43Q8NDM7 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC22.14■■□□□ 1.13
CFAP43Q8NDM7 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CFAP43Q8NDM7 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CFAP43Q8NDM7 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
CFAP43Q8NDM7 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC22.14■■□□□ 1.13
CFAP43Q8NDM7 BX679664.3-201ENST00000414070 555 ntBASIC22.14■■□□□ 1.13
CFAP43Q8NDM7 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
CFAP43Q8NDM7 HIST1H2APS2-201ENST00000454426 370 ntBASIC22.14■■□□□ 1.13
CFAP43Q8NDM7 AC113935.1-201ENST00000471722 555 ntBASIC22.14■■□□□ 1.13
CFAP43Q8NDM7 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC22.14■■□□□ 1.13
CFAP43Q8NDM7 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC22.14■■□□□ 1.13
CFAP43Q8NDM7 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC22.14■■□□□ 1.13
CFAP43Q8NDM7 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC22.14■■□□□ 1.13
CFAP43Q8NDM7 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC22.14■■□□□ 1.13
CFAP43Q8NDM7 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
CFAP43Q8NDM7 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
CFAP43Q8NDM7 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC22.14■■□□□ 1.13
CFAP43Q8NDM7 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC22.14■■□□□ 1.13
CFAP43Q8NDM7 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
CFAP43Q8NDM7 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CFAP43Q8NDM7 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC22.13■■□□□ 1.13
CFAP43Q8NDM7 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CFAP43Q8NDM7 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
CFAP43Q8NDM7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CFAP43Q8NDM7 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
CFAP43Q8NDM7 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CFAP43Q8NDM7 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CFAP43Q8NDM7 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CFAP43Q8NDM7 AC103592.1-201ENST00000394513 664 ntBASIC22.13■■□□□ 1.13
CFAP43Q8NDM7 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CFAP43Q8NDM7 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC22.13■■□□□ 1.13
CFAP43Q8NDM7 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC22.13■■□□□ 1.13
CFAP43Q8NDM7 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC22.13■■□□□ 1.13
CFAP43Q8NDM7 AC092896.1-201ENST00000465850 380 ntBASIC22.13■■□□□ 1.13
CFAP43Q8NDM7 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC22.13■■□□□ 1.13
CFAP43Q8NDM7 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC22.13■■□□□ 1.13
CFAP43Q8NDM7 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
CFAP43Q8NDM7 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC22.13■■□□□ 1.13
CFAP43Q8NDM7 AL022313.4-201ENST00000562756 2046 ntBASIC22.13■■□□□ 1.13
CFAP43Q8NDM7 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC22.13■■□□□ 1.13
CFAP43Q8NDM7 SNORD3B-1-201ENST00000577988 758 ntBASIC22.13■■□□□ 1.13
CFAP43Q8NDM7 FBXO36P1-201ENST00000579006 471 ntBASIC22.13■■□□□ 1.13
CFAP43Q8NDM7 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC22.13■■□□□ 1.13
CFAP43Q8NDM7 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC22.13■■□□□ 1.13
CFAP43Q8NDM7 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC22.13■■□□□ 1.13
CFAP43Q8NDM7 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
CFAP43Q8NDM7 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CFAP43Q8NDM7 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CFAP43Q8NDM7 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CFAP43Q8NDM7 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
CFAP43Q8NDM7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms