Protein–RNA interactions for Protein: P61165

TMEM258, Transmembrane protein 258, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258P61165 USP33-204ENST00000370794 4327 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
TMEM258P61165 RIPOR3-201ENST00000045083 4279 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
TMEM258P61165 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
TMEM258P61165 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
TMEM258P61165 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
TMEM258P61165 GZF1-201ENST00000338121 4835 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
TMEM258P61165 ZPR1-201ENST00000227322 6566 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
TMEM258P61165 AC079779.1-201ENST00000437798 4775 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
TMEM258P61165 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
TMEM258P61165 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC8.4□□□□□ -1.06
TMEM258P61165 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
TMEM258P61165 GGT1-206ENST00000404223 952 ntTSL 2 BASIC8.4□□□□□ -1.06
TMEM258P61165 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
TMEM258P61165 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
TMEM258P61165 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC8.4□□□□□ -1.06
TMEM258P61165 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC8.4□□□□□ -1.06
TMEM258P61165 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC8.4□□□□□ -1.06
TMEM258P61165 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC8.4□□□□□ -1.06
TMEM258P61165 PLD4-205ENST00000553861 667 ntTSL 2 BASIC8.4□□□□□ -1.06
TMEM258P61165 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC8.4□□□□□ -1.06
TMEM258P61165 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
TMEM258P61165 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
TMEM258P61165 GTPBP2-201ENST00000307114 2830 ntTSL 2 BASIC8.4□□□□□ -1.06
TMEM258P61165 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
TMEM258P61165 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
TMEM258P61165 CECR3-201ENST00000428828 1915 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
TMEM258P61165 PTCD2-211ENST00000536805 1911 ntTSL 2 BASIC8.4□□□□□ -1.06
TMEM258P61165 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
TMEM258P61165 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC8.4□□□□□ -1.07
TMEM258P61165 ESRP2-210ENST00000565858 3386 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.07
TMEM258P61165 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
TMEM258P61165 NUPR1-201ENST00000324873 5491 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
TMEM258P61165 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
TMEM258P61165 MEGF10-201ENST00000274473 7594 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
TMEM258P61165 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.07
TMEM258P61165 MST1R-215ENST00000621387 4449 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
TMEM258P61165 ZNF469-201ENST00000437464 13203 ntAPPRIS P2 TSL 5 BASIC8.4□□□□□ -1.07
TMEM258P61165 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
TMEM258P61165 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
TMEM258P61165 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
TMEM258P61165 ARHGEF4-201ENST00000326016 3666 ntAPPRIS P3 TSL 2 BASIC8.4□□□□□ -1.07
TMEM258P61165 AKAP1-219ENST00000621116 4285 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
TMEM258P61165 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
TMEM258P61165 GOLGA2P1-201ENST00000512938 2906 ntBASIC8.4□□□□□ -1.07
TMEM258P61165 PSMC4-201ENST00000157812 1591 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TMEM258P61165 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC8.39□□□□□ -1.07
TMEM258P61165 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TMEM258P61165 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TMEM258P61165 SLC5A11-210ENST00000568579 2139 ntTSL 5 BASIC8.39□□□□□ -1.07
TMEM258P61165 ARHGAP36-206ENST00000639280 2685 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TMEM258P61165 PDE6B-212ENST00000496514 3232 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
TMEM258P61165 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TMEM258P61165 RANBP3-203ENST00000439268 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
TMEM258P61165 CTBP2-201ENST00000309035 3669 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TMEM258P61165 FAM90A17P-201ENST00000533716 1957 ntBASIC8.39□□□□□ -1.07
TMEM258P61165 BAG6-235ENST00000362049 3626 ntTSL 2 BASIC8.39□□□□□ -1.07
TMEM258P61165 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC8.39□□□□□ -1.07
TMEM258P61165 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC8.39□□□□□ -1.07
TMEM258P61165 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TMEM258P61165 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
TMEM258P61165 NT5E-201ENST00000257770 3548 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TMEM258P61165 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC8.39□□□□□ -1.07
TMEM258P61165 LINC01254-201ENST00000566225 2908 ntBASIC8.39□□□□□ -1.07
TMEM258P61165 CSNK1A1-201ENST00000261798 6067 ntAPPRIS ALT1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TMEM258P61165 PCDHGB8P-202ENST00000507007 2873 ntBASIC8.39□□□□□ -1.07
TMEM258P61165 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TMEM258P61165 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC8.39□□□□□ -1.07
TMEM258P61165 NFASC-207ENST00000404907 5447 ntAPPRIS ALT1 TSL 5 BASIC8.39□□□□□ -1.07
TMEM258P61165 CCDC144CP-201ENST00000340196 2823 ntTSL 2 BASIC8.39□□□□□ -1.07
TMEM258P61165 PNMA6F-201ENST00000436629 3348 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
TMEM258P61165 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TMEM258P61165 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC8.39□□□□□ -1.07
TMEM258P61165 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC8.39□□□□□ -1.07
TMEM258P61165 KRT18P29-201ENST00000397031 1267 ntBASIC8.39□□□□□ -1.07
TMEM258P61165 RAC2-202ENST00000401529 569 ntTSL 4 BASIC8.39□□□□□ -1.07
TMEM258P61165 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC8.39□□□□□ -1.07
TMEM258P61165 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC8.39□□□□□ -1.07
TMEM258P61165 PON3-205ENST00000451904 1053 ntTSL 3 BASIC8.39□□□□□ -1.07
TMEM258P61165 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC8.39□□□□□ -1.07
TMEM258P61165 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC8.39□□□□□ -1.07
TMEM258P61165 MIR4313-201ENST00000580760 101 ntBASIC8.39□□□□□ -1.07
TMEM258P61165 STK25P1-201ENST00000585406 838 ntBASIC8.39□□□□□ -1.07
TMEM258P61165 TRIR-202ENST00000588213 841 ntTSL 3 BASIC8.39□□□□□ -1.07
TMEM258P61165 MIR6724-1-201ENST00000616420 92 ntBASIC8.39□□□□□ -1.07
TMEM258P61165 MIR6724-2-201ENST00000616483 92 ntBASIC8.39□□□□□ -1.07
TMEM258P61165 MIR6724-4-201ENST00000617390 92 ntBASIC8.39□□□□□ -1.07
TMEM258P61165 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
TMEM258P61165 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
TMEM258P61165 MIR6724-3-201ENST00000622482 92 ntBASIC8.39□□□□□ -1.07
TMEM258P61165 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC8.39□□□□□ -1.07
TMEM258P61165 SALL4P5-201ENST00000419001 1760 ntBASIC8.39□□□□□ -1.07
TMEM258P61165 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TMEM258P61165 FN1-204ENST00000356005 7846 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TMEM258P61165 TRAK1-206ENST00000449246 3260 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TMEM258P61165 C5orf56-201ENST00000337752 4767 ntAPPRIS P5 TSL 2 BASIC8.39□□□□□ -1.07
TMEM258P61165 HSBP1-201ENST00000433866 8784 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TMEM258P61165 ZKSCAN3-201ENST00000252211 4725 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TMEM258P61165 TPT1-212ENST00000530705 4735 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TMEM258P61165 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TMEM258P61165 DIS3L2-201ENST00000273009 3201 ntTSL 2 BASIC8.39□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms