RNA–Protein interactions for RNA: ENST00000507007.2

PCDHGB8P-202, Transcript of protocadherin gamma subfamily B, 8 pseudogene, humanhuman

BASIC

Gene PCDHGB8P, Length 2,873 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB8P-202ENST00000507007 NISCHQ9Y2I1 1504 aa26.2■■□□□ 1.79
PCDHGB8P-202ENST00000507007 SHROOM4Q9ULL8 1493 aa22.6■■□□□ 1.21
PCDHGB8P-202ENST00000507007 SUPT5HO00267 1087 aaKnown RBP22.2■■□□□ 1.14
PCDHGB8P-202ENST00000507007 ZCCHC6Q5VYS8 1495 aaKnown RBP22.16■■□□□ 1.14
PCDHGB8P-202ENST00000507007 CCDC180Q9P1Z9 1646 aa22.14■■□□□ 1.14
PCDHGB8P-202ENST00000507007 DCAF8L2P0C7V8 631 aa21.94■■□□□ 1.1
PCDHGB8P-202ENST00000507007 CHIC1Q5VXU3 224 aa21.54■■□□□ 1.04
PCDHGB8P-202ENST00000507007 MYO15BQ96JP2 1530 aa21.49■■□□□ 1.03
PCDHGB8P-202ENST00000507007 DCAF1Q9Y4B6 1507 aa21.39■■□□□ 1.02
PCDHGB8P-202ENST00000507007 PCGF6Q9BYE7 350 aa21.03■□□□□ 0.96
PCDHGB8P-202ENST00000507007 HRCP23327 699 aa21■□□□□ 0.95
PCDHGB8P-202ENST00000507007 LOC105371045A0A1W2PR82 267 aa21■□□□□ 0.95
PCDHGB8P-202ENST00000507007 SCRIBQ14160 1630 aa20.93■□□□□ 0.94
PCDHGB8P-202ENST00000507007 ABCC9O60706 1549 aa20.92■□□□□ 0.94
PCDHGB8P-202ENST00000507007 RSF1Q96T23 1441 aaPredicted RBP20.81■□□□□ 0.92
PCDHGB8P-202ENST00000507007 PPARGC1BQ86YN6 1023 aaKnown RBP20.68■□□□□ 0.9
PCDHGB8P-202ENST00000507007 RB1CC1Q8TDY2 1594 aa20.62■□□□□ 0.89
PCDHGB8P-202ENST00000507007 TRIM41Q8WV44 630 aa20.61■□□□□ 0.89
PCDHGB8P-202ENST00000507007 FAM9AQ8IZU1 332 aaPredicted RBP20.55■□□□□ 0.88
PCDHGB8P-202ENST00000507007 CECR2Q9BXF3 1484 aa20.52■□□□□ 0.88
PCDHGB8P-202ENST00000507007 TRIM26Q12899 539 aaPredicted RBP20.52■□□□□ 0.87
PCDHGB8P-202ENST00000507007 NACADO15069 1562 aa20.49■□□□□ 0.87
PCDHGB8P-202ENST00000507007 EHMT2Q96KQ7 1210 aa20.44■□□□□ 0.86
PCDHGB8P-202ENST00000507007 MROH2BQ7Z745 1585 aa20.43■□□□□ 0.86
PCDHGB8P-202ENST00000507007 WIZO95785 1651 aa20.33■□□□□ 0.84
PCDHGB8P-202ENST00000507007 BAZ1AQ9NRL2 1556 aaPredicted RBP20.12■□□□□ 0.81
PCDHGB8P-202ENST00000507007 SLC24A1O60721 1099 aa20.12■□□□□ 0.81
PCDHGB8P-202ENST00000507007 ZEB1P37275 1124 aaPredicted RBP20.04■□□□□ 0.8
PCDHGB8P-202ENST00000507007 EIF4G1Q04637 1599 aaKnown RBP20■□□□□ 0.79
PCDHGB8P-202ENST00000507007 ABCC8Q09428 1581 aa19.94■□□□□ 0.78
PCDHGB8P-202ENST00000507007 SMARCA4P51532 1647 aa19.93■□□□□ 0.78
PCDHGB8P-202ENST00000507007 TOP2AP11388 1531 aaKnown RBP19.93■□□□□ 0.78
PCDHGB8P-202ENST00000507007 CCDC88BA6NC98 1476 aa19.92■□□□□ 0.78
PCDHGB8P-202ENST00000507007 UNC13AQ9UPW8 1703 aa19.9■□□□□ 0.78
PCDHGB8P-202ENST00000507007 SMARCA2P51531 1590 aa19.86■□□□□ 0.77
PCDHGB8P-202ENST00000507007 PABPN1Q86U42 306 aaKnown RBP eCLIP19.83■□□□□ 0.76
PCDHGB8P-202ENST00000507007 TTBK1Q5TCY1 1321 aaPredicted RBP19.79■□□□□ 0.76
PCDHGB8P-202ENST00000507007 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.78■□□□□ 0.76
PCDHGB8P-202ENST00000507007 SOGA1O94964 1423 aa19.78■□□□□ 0.76
PCDHGB8P-202ENST00000507007 CCER1Q8TC90 406 aaPredicted RBP19.7■□□□□ 0.74
PCDHGB8P-202ENST00000507007 RUSC2Q8N2Y8 1516 aa19.69■□□□□ 0.74
PCDHGB8P-202ENST00000507007 CEP162Q5TB80 1403 aa19.69■□□□□ 0.74
PCDHGB8P-202ENST00000507007 CSRNP3Q8WYN3 585 aa19.66■□□□□ 0.74
PCDHGB8P-202ENST00000507007 BICRAQ9NZM4 1560 aa19.65■□□□□ 0.74
PCDHGB8P-202ENST00000507007 UBTFP17480 764 aaKnown RBP19.65■□□□□ 0.74
PCDHGB8P-202ENST00000507007 WRNQ14191 1432 aaPredicted RBP eCLIP19.61■□□□□ 0.73
PCDHGB8P-202ENST00000507007 TNIKQ9UKE5 1360 aa19.61■□□□□ 0.73
PCDHGB8P-202ENST00000507007 EEA1Q15075 1411 aa19.55■□□□□ 0.72
PCDHGB8P-202ENST00000507007 PEG3Q9GZU2 1588 aa19.48■□□□□ 0.71
PCDHGB8P-202ENST00000507007 GOLGA3Q08378 1498 aa19.48■□□□□ 0.71
PCDHGB8P-202ENST00000507007 SYNJ1O43426 1573 aa19.45■□□□□ 0.7
PCDHGB8P-202ENST00000507007 SCAF1Q9H7N4 1312 aaKnown RBP19.45■□□□□ 0.7
PCDHGB8P-202ENST00000507007 ATAD2BQ9ULI0 1458 aa19.42■□□□□ 0.7
PCDHGB8P-202ENST00000507007 BAZ1BQ9UIG0 1483 aaKnown RBP19.39■□□□□ 0.69
PCDHGB8P-202ENST00000507007 CEP164Q9UPV0 1460 aa19.36■□□□□ 0.69
PCDHGB8P-202ENST00000507007 RANGAP1P46060 587 aaPredicted RBP19.34■□□□□ 0.69
PCDHGB8P-202ENST00000507007 DIEXFQ68CQ4 756 aaKnown RBP19.34■□□□□ 0.69
PCDHGB8P-202ENST00000507007 CLIP1P30622 1438 aa19.31■□□□□ 0.68
PCDHGB8P-202ENST00000507007 KIF21BO75037 1637 aa19.29■□□□□ 0.68
PCDHGB8P-202ENST00000507007 HNRNPUL2Q1KMD3 747 aaKnown RBP19.29■□□□□ 0.68
PCDHGB8P-202ENST00000507007 RAPGEF2Q9Y4G8 1499 aa19.27■□□□□ 0.67
PCDHGB8P-202ENST00000507007 NEUROD1Q13562 356 aa19.22■□□□□ 0.67
PCDHGB8P-202ENST00000507007 VPS8Q8N3P4 1428 aa19.2■□□□□ 0.66
PCDHGB8P-202ENST00000507007 ACIN1Q9UKV3 1341 aaKnown RBP19.2■□□□□ 0.66
PCDHGB8P-202ENST00000507007 APLP2Q06481 763 aa19.18■□□□□ 0.66
PCDHGB8P-202ENST00000507007 TOP2BQ02880 1626 aa19.15■□□□□ 0.66
PCDHGB8P-202ENST00000507007 ZNF316A6NFI3 1004 aaPredicted RBP19.14■□□□□ 0.65
PCDHGB8P-202ENST00000507007 BIVM-ERCC5R4GMW8 1640 aa19.05■□□□□ 0.64
PCDHGB8P-202ENST00000507007 CENPBP07199 599 aaPredicted RBP19.05■□□□□ 0.64
PCDHGB8P-202ENST00000507007 PELP1Q8IZL8 1130 aaKnown RBP19.03■□□□□ 0.64
PCDHGB8P-202ENST00000507007 GTF3C3Q9Y5Q9 886 aa19.03■□□□□ 0.64
PCDHGB8P-202ENST00000507007 PRXQ9BXM0 1461 aa19.01■□□□□ 0.63
PCDHGB8P-202ENST00000507007 NCAPD3P42695 1498 aa19■□□□□ 0.63
PCDHGB8P-202ENST00000507007 CUX1P39880 1505 aa18.99■□□□□ 0.63
PCDHGB8P-202ENST00000507007 YTHDC1Q96MU7 727 aaKnown RBP18.97■□□□□ 0.63
PCDHGB8P-202ENST00000507007 ERICH3Q5RHP9 1530 aa18.97■□□□□ 0.63
PCDHGB8P-202ENST00000507007 ARAP1Q96P48 1450 aa18.96■□□□□ 0.63
PCDHGB8P-202ENST00000507007 KANK4Q5T7N3 995 aaPredicted RBP18.96■□□□□ 0.63
PCDHGB8P-202ENST00000507007 HMGXB3Q12766 1538 aa18.96■□□□□ 0.63
PCDHGB8P-202ENST00000507007 MIER1Q8N108 512 aa18.94■□□□□ 0.62
PCDHGB8P-202ENST00000507007 KIF27Q86VH2 1401 aa18.92■□□□□ 0.62
PCDHGB8P-202ENST00000507007 CFTRP13569 1480 aa18.89■□□□□ 0.61
PCDHGB8P-202ENST00000507007 DHX57Q6P158 1386 aaKnown RBP18.82■□□□□ 0.6
PCDHGB8P-202ENST00000507007 ARHGAP35Q9NRY4 1499 aa18.8■□□□□ 0.6
PCDHGB8P-202ENST00000507007 ITGAEP38570 1179 aa18.79■□□□□ 0.6
PCDHGB8P-202ENST00000507007 CUX2O14529 1486 aa18.76■□□□□ 0.59
PCDHGB8P-202ENST00000507007 RRBP1Q9P2E9 1410 aaKnown RBP18.74■□□□□ 0.59
PCDHGB8P-202ENST00000507007 IGF1RP08069 1367 aa18.74■□□□□ 0.59
PCDHGB8P-202ENST00000507007 CLSPNQ9HAW4 1339 aa18.73■□□□□ 0.59
PCDHGB8P-202ENST00000507007 CCNB3Q8WWL7 1395 aa18.71■□□□□ 0.59
PCDHGB8P-202ENST00000507007 CADPSQ9ULU8 1353 aa18.68■□□□□ 0.58
PCDHGB8P-202ENST00000507007 CARMIL1Q5VZK9 1371 aa18.66■□□□□ 0.58
PCDHGB8P-202ENST00000507007 FGD5Q6ZNL6 1462 aa18.66■□□□□ 0.58
PCDHGB8P-202ENST00000507007 PRDM2Q13029 1718 aa18.65■□□□□ 0.58
PCDHGB8P-202ENST00000507007 P3H3Q8IVL6 736 aa18.63■□□□□ 0.57
PCDHGB8P-202ENST00000507007 ATP1B4Q9UN42 357 aaPredicted RBP18.58■□□□□ 0.57
PCDHGB8P-202ENST00000507007 RAB3GAP2Q9H2M9 1393 aa18.58■□□□□ 0.56
PCDHGB8P-202ENST00000507007 TIAM1Q13009 1591 aa18.58■□□□□ 0.56
PCDHGB8P-202ENST00000507007 FAM50AQ14320 339 aaKnown RBP18.53■□□□□ 0.56
PCDHGB8P-202ENST00000507007 PHLDB1Q86UU1 1377 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms