RNA–Protein interactions for RNA: ENST00000533716.1

FAM90A17P-201, Transcript of family with sequence similarity 90 member A17, pseudogene, humanhuman

BASIC

Gene FAM90A17P, Length 1,957 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A17P-201ENST00000533716 NISCHQ9Y2I1 1504 aa27.79■■■□□ 2.04
FAM90A17P-201ENST00000533716 CCDC180Q9P1Z9 1646 aa24.62■■□□□ 1.53
FAM90A17P-201ENST00000533716 ABCC9O60706 1549 aa24.23■■□□□ 1.47
FAM90A17P-201ENST00000533716 ZCCHC6Q5VYS8 1495 aaKnown RBP23.44■■□□□ 1.34
FAM90A17P-201ENST00000533716 DCAF8L2P0C7V8 631 aa23.39■■□□□ 1.33
FAM90A17P-201ENST00000533716 SHROOM4Q9ULL8 1493 aa23.16■■□□□ 1.3
FAM90A17P-201ENST00000533716 RB1CC1Q8TDY2 1594 aa23.14■■□□□ 1.3
FAM90A17P-201ENST00000533716 NACADO15069 1562 aa23.08■■□□□ 1.28
FAM90A17P-201ENST00000533716 DCAF1Q9Y4B6 1507 aa22.94■■□□□ 1.26
FAM90A17P-201ENST00000533716 UNC13AQ9UPW8 1703 aa22.88■■□□□ 1.25
FAM90A17P-201ENST00000533716 MYO15BQ96JP2 1530 aa22.83■■□□□ 1.25
FAM90A17P-201ENST00000533716 SCRIBQ14160 1630 aa22.71■■□□□ 1.23
FAM90A17P-201ENST00000533716 PABPN1Q86U42 306 aaKnown RBP eCLIP22.69■■□□□ 1.22
FAM90A17P-201ENST00000533716 SUPT5HO00267 1087 aaKnown RBP22.68■■□□□ 1.22
FAM90A17P-201ENST00000533716 BICRAQ9NZM4 1560 aa22.58■■□□□ 1.2
FAM90A17P-201ENST00000533716 DNAJC5BQ9UF47 199 aa22.21■■□□□ 1.15
FAM90A17P-201ENST00000533716 CHIC1Q5VXU3 224 aa22.08■■□□□ 1.12
FAM90A17P-201ENST00000533716 EIF4G1Q04637 1599 aaKnown RBP21.93■■□□□ 1.1
FAM90A17P-201ENST00000533716 CC2D2AQ9P2K1 1620 aa21.87■■□□□ 1.09
FAM90A17P-201ENST00000533716 RSF1Q96T23 1441 aaPredicted RBP21.81■■□□□ 1.08
FAM90A17P-201ENST00000533716 CECR2Q9BXF3 1484 aa21.8■■□□□ 1.08
FAM90A17P-201ENST00000533716 SMARCA4P51532 1647 aa21.61■■□□□ 1.05
FAM90A17P-201ENST00000533716 MROH2BQ7Z745 1585 aa21.54■■□□□ 1.04
FAM90A17P-201ENST00000533716 BAZ1AQ9NRL2 1556 aaPredicted RBP21.49■■□□□ 1.03
FAM90A17P-201ENST00000533716 ATAD2BQ9ULI0 1458 aa21.42■■□□□ 1.02
FAM90A17P-201ENST00000533716 WIZO95785 1651 aa21.38■■□□□ 1.01
FAM90A17P-201ENST00000533716 SMARCA2P51531 1590 aa21.32■■□□□ 1
FAM90A17P-201ENST00000533716 NCAPD3P42695 1498 aa21.29■■□□□ 1
FAM90A17P-201ENST00000533716 TRIM41Q8WV44 630 aa21.29■■□□□ 1
FAM90A17P-201ENST00000533716 PEG3Q9GZU2 1588 aa21.26■□□□□ 0.99
FAM90A17P-201ENST00000533716 BAZ1BQ9UIG0 1483 aaKnown RBP21.26■□□□□ 0.99
FAM90A17P-201ENST00000533716 LOC105371045A0A1W2PR82 267 aa21.25■□□□□ 0.99
FAM90A17P-201ENST00000533716 HMGXB3Q12766 1538 aa21.23■□□□□ 0.99
FAM90A17P-201ENST00000533716 TOP2AP11388 1531 aaKnown RBP21.11■□□□□ 0.97
FAM90A17P-201ENST00000533716 PCGF6Q9BYE7 350 aa21.08■□□□□ 0.97
FAM90A17P-201ENST00000533716 HRCP23327 699 aa21.07■□□□□ 0.96
FAM90A17P-201ENST00000533716 NESP48681 1621 aa21.04■□□□□ 0.96
FAM90A17P-201ENST00000533716 TRIM26Q12899 539 aaPredicted RBP20.92■□□□□ 0.94
FAM90A17P-201ENST00000533716 CCDC88BA6NC98 1476 aa20.92■□□□□ 0.94
FAM90A17P-201ENST00000533716 FAM9AQ8IZU1 332 aaPredicted RBP20.9■□□□□ 0.94
FAM90A17P-201ENST00000533716 KIF21AQ7Z4S6 1674 aa20.8■□□□□ 0.92
FAM90A17P-201ENST00000533716 ERCC6Q03468 1493 aa20.78■□□□□ 0.92
FAM90A17P-201ENST00000533716 LAMC3Q9Y6N6 1575 aa20.76■□□□□ 0.91
FAM90A17P-201ENST00000533716 CADPSQ9ULU8 1353 aa20.72■□□□□ 0.91
FAM90A17P-201ENST00000533716 ABCC8Q09428 1581 aa20.69■□□□□ 0.9
FAM90A17P-201ENST00000533716 EEA1Q15075 1411 aa20.64■□□□□ 0.9
FAM90A17P-201ENST00000533716 CFTRP13569 1480 aa20.62■□□□□ 0.89
FAM90A17P-201ENST00000533716 THOC2Q8NI27 1593 aaKnown RBP20.61■□□□□ 0.89
FAM90A17P-201ENST00000533716 PRDM2Q13029 1718 aa20.58■□□□□ 0.89
FAM90A17P-201ENST00000533716 PDS5BQ9NTI5 1447 aa20.57■□□□□ 0.88
FAM90A17P-201ENST00000533716 EHMT2Q96KQ7 1210 aa20.57■□□□□ 0.88
FAM90A17P-201ENST00000533716 FANCD2Q9BXW9 1451 aa20.56■□□□□ 0.88
FAM90A17P-201ENST00000533716 WRNQ14191 1432 aaPredicted RBP eCLIP20.52■□□□□ 0.88
FAM90A17P-201ENST00000533716 ZEB1P37275 1124 aaPredicted RBP20.52■□□□□ 0.87
FAM90A17P-201ENST00000533716 CEP164Q9UPV0 1460 aa20.5■□□□□ 0.87
FAM90A17P-201ENST00000533716 SOGA1O94964 1423 aa20.48■□□□□ 0.87
FAM90A17P-201ENST00000533716 CSRNP3Q8WYN3 585 aa20.46■□□□□ 0.87
FAM90A17P-201ENST00000533716 TNIKQ9UKE5 1360 aa20.45■□□□□ 0.87
FAM90A17P-201ENST00000533716 MRC2Q9UBG0 1479 aa20.44■□□□□ 0.86
FAM90A17P-201ENST00000533716 URB2Q14146 1524 aaKnown RBP20.41■□□□□ 0.86
FAM90A17P-201ENST00000533716 PPARGC1BQ86YN6 1023 aaKnown RBP20.41■□□□□ 0.86
FAM90A17P-201ENST00000533716 CUX2O14529 1486 aa20.39■□□□□ 0.85
FAM90A17P-201ENST00000533716 WDR62O43379 1518 aa20.38■□□□□ 0.85
FAM90A17P-201ENST00000533716 CEP162Q5TB80 1403 aa20.38■□□□□ 0.85
FAM90A17P-201ENST00000533716 GOLGA3Q08378 1498 aa20.37■□□□□ 0.85
FAM90A17P-201ENST00000533716 SYNJ1O43426 1573 aa20.36■□□□□ 0.85
FAM90A17P-201ENST00000533716 RUSC2Q8N2Y8 1516 aa20.34■□□□□ 0.85
FAM90A17P-201ENST00000533716 KIF21BO75037 1637 aa20.28■□□□□ 0.84
FAM90A17P-201ENST00000533716 UBTFP17480 764 aaKnown RBP20.28■□□□□ 0.84
FAM90A17P-201ENST00000533716 TOPBP1Q92547 1522 aa20.25■□□□□ 0.83
FAM90A17P-201ENST00000533716 TOP2BQ02880 1626 aa20.24■□□□□ 0.83
FAM90A17P-201ENST00000533716 DNMBPQ6XZF7 1577 aa20.2■□□□□ 0.82
FAM90A17P-201ENST00000533716 BIVM-ERCC5R4GMW8 1640 aa20.19■□□□□ 0.82
FAM90A17P-201ENST00000533716 CUX1P39880 1505 aa20.18■□□□□ 0.82
FAM90A17P-201ENST00000533716 ZNF608Q9ULD9 1512 aaPredicted RBP20.11■□□□□ 0.81
FAM90A17P-201ENST00000533716 RAD54L2Q9Y4B4 1467 aa20.1■□□□□ 0.81
FAM90A17P-201ENST00000533716 POLA1P09884 1462 aaPredicted RBP20.09■□□□□ 0.81
FAM90A17P-201ENST00000533716 FGD5Q6ZNL6 1462 aa20.08■□□□□ 0.81
FAM90A17P-201ENST00000533716 CLIP1P30622 1438 aa20.07■□□□□ 0.8
FAM90A17P-201ENST00000533716 TARBP1Q13395 1621 aaKnown RBP20.05■□□□□ 0.8
FAM90A17P-201ENST00000533716 RAPGEF2Q9Y4G8 1499 aa20.03■□□□□ 0.8
FAM90A17P-201ENST00000533716 ERICH3Q5RHP9 1530 aa20.02■□□□□ 0.8
FAM90A17P-201ENST00000533716 EIF4G3O43432 1585 aaKnown RBP20■□□□□ 0.79
FAM90A17P-201ENST00000533716 IFT140Q96RY7 1462 aa20■□□□□ 0.79
FAM90A17P-201ENST00000533716 VPS8Q8N3P4 1428 aa19.99■□□□□ 0.79
FAM90A17P-201ENST00000533716 CCER1Q8TC90 406 aaPredicted RBP19.98■□□□□ 0.79
FAM90A17P-201ENST00000533716 AQRO60306 1485 aaKnown RBP eCLIP19.98■□□□□ 0.79
FAM90A17P-201ENST00000533716 PRXQ9BXM0 1461 aa19.97■□□□□ 0.79
FAM90A17P-201ENST00000533716 KIF27Q86VH2 1401 aa19.96■□□□□ 0.79
FAM90A17P-201ENST00000533716 TDRD9Q8NDG6 1382 aaKnown RBP19.95■□□□□ 0.78
FAM90A17P-201ENST00000533716 WDR97A6NE52 1622 aa19.94■□□□□ 0.78
FAM90A17P-201ENST00000533716 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.93■□□□□ 0.78
FAM90A17P-201ENST00000533716 APLP2Q06481 763 aa19.9■□□□□ 0.78
FAM90A17P-201ENST00000533716 TTBK1Q5TCY1 1321 aaPredicted RBP19.89■□□□□ 0.77
FAM90A17P-201ENST00000533716 PBRM1Q86U86 1689 aa19.82■□□□□ 0.76
FAM90A17P-201ENST00000533716 CHD1O14646 1710 aa19.8■□□□□ 0.76
FAM90A17P-201ENST00000533716 ABCA10Q8WWZ4 1543 aa19.79■□□□□ 0.76
FAM90A17P-201ENST00000533716 ABCA5Q8WWZ7 1642 aa19.79■□□□□ 0.76
FAM90A17P-201ENST00000533716 SNAPC4Q5SXM2 1469 aa19.77■□□□□ 0.75
FAM90A17P-201ENST00000533716 GAPVD1Q14C86 1478 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms