RNA–Protein interactions for RNA: ENST00000496514.5

PDE6B-212, Transcript of phosphodiesterase 6B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDE6B, Length 3,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-212ENST00000496514 NISCHQ9Y2I1 1504 aa25.82■■□□□ 1.72
PDE6B-212ENST00000496514 SHROOM4Q9ULL8 1493 aa22.45■■□□□ 1.18
PDE6B-212ENST00000496514 DCAF8L2P0C7V8 631 aa22.16■■□□□ 1.14
PDE6B-212ENST00000496514 SUPT5HO00267 1087 aaKnown RBP21.88■■□□□ 1.09
PDE6B-212ENST00000496514 CCDC180Q9P1Z9 1646 aa21.79■■□□□ 1.08
PDE6B-212ENST00000496514 ZCCHC6Q5VYS8 1495 aaKnown RBP21.74■■□□□ 1.07
PDE6B-212ENST00000496514 ABCC9O60706 1549 aa20.96■□□□□ 0.95
PDE6B-212ENST00000496514 CHIC1Q5VXU3 224 aa20.9■□□□□ 0.94
PDE6B-212ENST00000496514 DCAF1Q9Y4B6 1507 aa20.89■□□□□ 0.93
PDE6B-212ENST00000496514 SCRIBQ14160 1630 aa20.84■□□□□ 0.93
PDE6B-212ENST00000496514 MYO15BQ96JP2 1530 aa20.79■□□□□ 0.92
PDE6B-212ENST00000496514 LOC105371045A0A1W2PR82 267 aa20.51■□□□□ 0.87
PDE6B-212ENST00000496514 RSF1Q96T23 1441 aaPredicted RBP20.45■□□□□ 0.86
PDE6B-212ENST00000496514 EHMT2Q96KQ7 1210 aa20.42■□□□□ 0.86
PDE6B-212ENST00000496514 CECR2Q9BXF3 1484 aa20.38■□□□□ 0.85
PDE6B-212ENST00000496514 FAM9AQ8IZU1 332 aaPredicted RBP20.34■□□□□ 0.85
PDE6B-212ENST00000496514 NACADO15069 1562 aa20.3■□□□□ 0.84
PDE6B-212ENST00000496514 RB1CC1Q8TDY2 1594 aa20.26■□□□□ 0.83
PDE6B-212ENST00000496514 PCGF6Q9BYE7 350 aa20.23■□□□□ 0.83
PDE6B-212ENST00000496514 TRIM41Q8WV44 630 aa20.21■□□□□ 0.83
PDE6B-212ENST00000496514 MROH2BQ7Z745 1585 aa20.2■□□□□ 0.82
PDE6B-212ENST00000496514 PABPN1Q86U42 306 aaKnown RBP eCLIP20.18■□□□□ 0.82
PDE6B-212ENST00000496514 WIZO95785 1651 aa20.08■□□□□ 0.81
PDE6B-212ENST00000496514 UNC13AQ9UPW8 1703 aa19.83■□□□□ 0.76
PDE6B-212ENST00000496514 PPARGC1BQ86YN6 1023 aaKnown RBP19.82■□□□□ 0.76
PDE6B-212ENST00000496514 HRCP23327 699 aa19.81■□□□□ 0.76
PDE6B-212ENST00000496514 BAZ1AQ9NRL2 1556 aaPredicted RBP19.79■□□□□ 0.76
PDE6B-212ENST00000496514 SMARCA4P51532 1647 aa19.7■□□□□ 0.74
PDE6B-212ENST00000496514 ABCC8Q09428 1581 aa19.67■□□□□ 0.74
PDE6B-212ENST00000496514 CCDC88BA6NC98 1476 aa19.66■□□□□ 0.74
PDE6B-212ENST00000496514 TTBK1Q5TCY1 1321 aaPredicted RBP19.64■□□□□ 0.73
PDE6B-212ENST00000496514 BICRAQ9NZM4 1560 aa19.63■□□□□ 0.73
PDE6B-212ENST00000496514 TRIM26Q12899 539 aaPredicted RBP19.62■□□□□ 0.73
PDE6B-212ENST00000496514 TOP2AP11388 1531 aaKnown RBP19.58■□□□□ 0.73
PDE6B-212ENST00000496514 SMARCA2P51531 1590 aa19.54■□□□□ 0.72
PDE6B-212ENST00000496514 EIF4G1Q04637 1599 aaKnown RBP19.47■□□□□ 0.71
PDE6B-212ENST00000496514 SOGA1O94964 1423 aa19.45■□□□□ 0.7
PDE6B-212ENST00000496514 RUSC2Q8N2Y8 1516 aa19.4■□□□□ 0.7
PDE6B-212ENST00000496514 RANGAP1P46060 587 aaPredicted RBP19.38■□□□□ 0.69
PDE6B-212ENST00000496514 UBTFP17480 764 aaKnown RBP19.37■□□□□ 0.69
PDE6B-212ENST00000496514 ATAD2BQ9ULI0 1458 aa19.31■□□□□ 0.68
PDE6B-212ENST00000496514 BAZ1BQ9UIG0 1483 aaKnown RBP19.29■□□□□ 0.68
PDE6B-212ENST00000496514 CSRNP3Q8WYN3 585 aa19.26■□□□□ 0.67
PDE6B-212ENST00000496514 WRNQ14191 1432 aaPredicted RBP eCLIP19.24■□□□□ 0.67
PDE6B-212ENST00000496514 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.18■□□□□ 0.66
PDE6B-212ENST00000496514 CEP162Q5TB80 1403 aa19.15■□□□□ 0.66
PDE6B-212ENST00000496514 SYNJ1O43426 1573 aa19.14■□□□□ 0.65
PDE6B-212ENST00000496514 PEG3Q9GZU2 1588 aa19.13■□□□□ 0.65
PDE6B-212ENST00000496514 PELP1Q8IZL8 1130 aaKnown RBP19.08■□□□□ 0.64
PDE6B-212ENST00000496514 TNIKQ9UKE5 1360 aa19.02■□□□□ 0.64
PDE6B-212ENST00000496514 CCER1Q8TC90 406 aaPredicted RBP19.02■□□□□ 0.63
PDE6B-212ENST00000496514 GOLGA3Q08378 1498 aa18.97■□□□□ 0.63
PDE6B-212ENST00000496514 EEA1Q15075 1411 aa18.93■□□□□ 0.62
PDE6B-212ENST00000496514 RAPGEF2Q9Y4G8 1499 aa18.93■□□□□ 0.62
PDE6B-212ENST00000496514 ZEB1P37275 1124 aaPredicted RBP18.91■□□□□ 0.62
PDE6B-212ENST00000496514 HNRNPUL2Q1KMD3 747 aaKnown RBP18.89■□□□□ 0.62
PDE6B-212ENST00000496514 NCAPD3P42695 1498 aa18.87■□□□□ 0.61
PDE6B-212ENST00000496514 CLIP1P30622 1438 aa18.85■□□□□ 0.61
PDE6B-212ENST00000496514 CEP164Q9UPV0 1460 aa18.85■□□□□ 0.61
PDE6B-212ENST00000496514 APLP2Q06481 763 aa18.78■□□□□ 0.6
PDE6B-212ENST00000496514 CUX1P39880 1505 aa18.78■□□□□ 0.6
PDE6B-212ENST00000496514 TOP2BQ02880 1626 aa18.77■□□□□ 0.6
PDE6B-212ENST00000496514 HMGXB3Q12766 1538 aa18.76■□□□□ 0.59
PDE6B-212ENST00000496514 KIF21BO75037 1637 aa18.71■□□□□ 0.59
PDE6B-212ENST00000496514 DNAJC5BQ9UF47 199 aa18.7■□□□□ 0.58
PDE6B-212ENST00000496514 CFTRP13569 1480 aa18.7■□□□□ 0.58
PDE6B-212ENST00000496514 CC2D2AQ9P2K1 1620 aa18.66■□□□□ 0.58
PDE6B-212ENST00000496514 VPS8Q8N3P4 1428 aa18.65■□□□□ 0.58
PDE6B-212ENST00000496514 BIVM-ERCC5R4GMW8 1640 aa18.64■□□□□ 0.57
PDE6B-212ENST00000496514 KANK4Q5T7N3 995 aaPredicted RBP18.63■□□□□ 0.57
PDE6B-212ENST00000496514 CADPSQ9ULU8 1353 aa18.62■□□□□ 0.57
PDE6B-212ENST00000496514 P3H3Q8IVL6 736 aa18.62■□□□□ 0.57
PDE6B-212ENST00000496514 KIF27Q86VH2 1401 aa18.62■□□□□ 0.57
PDE6B-212ENST00000496514 CUX2O14529 1486 aa18.61■□□□□ 0.57
PDE6B-212ENST00000496514 NESP48681 1621 aa18.6■□□□□ 0.57
PDE6B-212ENST00000496514 ITGAEP38570 1179 aa18.59■□□□□ 0.57
PDE6B-212ENST00000496514 ATP1B4Q9UN42 357 aaPredicted RBP18.58■□□□□ 0.56
PDE6B-212ENST00000496514 PRXQ9BXM0 1461 aa18.58■□□□□ 0.56
PDE6B-212ENST00000496514 MYT1Q01538 1121 aa18.57■□□□□ 0.56
PDE6B-212ENST00000496514 ARAP1Q96P48 1450 aa18.53■□□□□ 0.56
PDE6B-212ENST00000496514 FGD5Q6ZNL6 1462 aa18.52■□□□□ 0.56
PDE6B-212ENST00000496514 IGF1RP08069 1367 aa18.49■□□□□ 0.55
PDE6B-212ENST00000496514 RAD54L2Q9Y4B4 1467 aa18.49■□□□□ 0.55
PDE6B-212ENST00000496514 FANCD2Q9BXW9 1451 aa18.48■□□□□ 0.55
PDE6B-212ENST00000496514 CARMIL1Q5VZK9 1371 aa18.44■□□□□ 0.54
PDE6B-212ENST00000496514 DIEXFQ68CQ4 756 aaKnown RBP18.44■□□□□ 0.54
PDE6B-212ENST00000496514 ERICH3Q5RHP9 1530 aa18.43■□□□□ 0.54
PDE6B-212ENST00000496514 ARHGAP35Q9NRY4 1499 aa18.41■□□□□ 0.54
PDE6B-212ENST00000496514 TDRD9Q8NDG6 1382 aaKnown RBP18.34■□□□□ 0.53
PDE6B-212ENST00000496514 PRDM2Q13029 1718 aa18.31■□□□□ 0.52
PDE6B-212ENST00000496514 POLA1P09884 1462 aaPredicted RBP18.31■□□□□ 0.52
PDE6B-212ENST00000496514 TOPBP1Q92547 1522 aa18.3■□□□□ 0.52
PDE6B-212ENST00000496514 YTHDC1Q96MU7 727 aaKnown RBP18.28■□□□□ 0.52
PDE6B-212ENST00000496514 ZNF316A6NFI3 1004 aaPredicted RBP18.28■□□□□ 0.52
PDE6B-212ENST00000496514 FAM50AQ14320 339 aaKnown RBP18.28■□□□□ 0.52
PDE6B-212ENST00000496514 FHOD3Q2V2M9 1422 aa18.27■□□□□ 0.51
PDE6B-212ENST00000496514 SCAF1Q9H7N4 1312 aaKnown RBP18.24■□□□□ 0.51
PDE6B-212ENST00000496514 ARID3CA6NKF2 412 aa18.23■□□□□ 0.51
PDE6B-212ENST00000496514 URB2Q14146 1524 aaKnown RBP18.22■□□□□ 0.51
PDE6B-212ENST00000496514 DNMBPQ6XZF7 1577 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms