RNA–Protein interactions for RNA: ENST00000341062.6

TRIM60-201, Transcript of tripartite motif containing 60, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM60, Length 1,867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60-201ENST00000341062 NISCHQ9Y2I1 1504 aa30.29■■■□□ 2.44
TRIM60-201ENST00000341062 CCDC180Q9P1Z9 1646 aa26.59■■□□□ 1.85
TRIM60-201ENST00000341062 ABCC9O60706 1549 aa25.73■■□□□ 1.71
TRIM60-201ENST00000341062 ZCCHC6Q5VYS8 1495 aaKnown RBP25.34■■□□□ 1.65
TRIM60-201ENST00000341062 DCAF8L2P0C7V8 631 aa25.21■■□□□ 1.63
TRIM60-201ENST00000341062 DCAF1Q9Y4B6 1507 aa24.94■■□□□ 1.58
TRIM60-201ENST00000341062 NACADO15069 1562 aa24.85■■□□□ 1.57
TRIM60-201ENST00000341062 MYO15BQ96JP2 1530 aa24.8■■□□□ 1.56
TRIM60-201ENST00000341062 RB1CC1Q8TDY2 1594 aa24.78■■□□□ 1.56
TRIM60-201ENST00000341062 SCRIBQ14160 1630 aa24.51■■□□□ 1.51
TRIM60-201ENST00000341062 SHROOM4Q9ULL8 1493 aa24.48■■□□□ 1.51
TRIM60-201ENST00000341062 UNC13AQ9UPW8 1703 aa24.46■■□□□ 1.51
TRIM60-201ENST00000341062 BICRAQ9NZM4 1560 aa24.19■■□□□ 1.46
TRIM60-201ENST00000341062 PABPN1Q86U42 306 aaKnown RBP eCLIP24.19■■□□□ 1.46
TRIM60-201ENST00000341062 CECR2Q9BXF3 1484 aa23.69■■□□□ 1.38
TRIM60-201ENST00000341062 MROH2BQ7Z745 1585 aa23.46■■□□□ 1.35
TRIM60-201ENST00000341062 EIF4G1Q04637 1599 aaKnown RBP23.44■■□□□ 1.34
TRIM60-201ENST00000341062 SMARCA4P51532 1647 aa23.41■■□□□ 1.34
TRIM60-201ENST00000341062 BAZ1AQ9NRL2 1556 aaPredicted RBP23.36■■□□□ 1.33
TRIM60-201ENST00000341062 RSF1Q96T23 1441 aaPredicted RBP23.33■■□□□ 1.32
TRIM60-201ENST00000341062 SUPT5HO00267 1087 aaKnown RBP23.28■■□□□ 1.32
TRIM60-201ENST00000341062 DNAJC5BQ9UF47 199 aa23.27■■□□□ 1.32
TRIM60-201ENST00000341062 WIZO95785 1651 aa23.26■■□□□ 1.31
TRIM60-201ENST00000341062 CC2D2AQ9P2K1 1620 aa23.25■■□□□ 1.31
TRIM60-201ENST00000341062 ATAD2BQ9ULI0 1458 aa23.14■■□□□ 1.29
TRIM60-201ENST00000341062 PEG3Q9GZU2 1588 aa23.09■■□□□ 1.29
TRIM60-201ENST00000341062 SMARCA2P51531 1590 aa23.02■■□□□ 1.28
TRIM60-201ENST00000341062 NCAPD3P42695 1498 aa22.97■■□□□ 1.27
TRIM60-201ENST00000341062 BAZ1BQ9UIG0 1483 aaKnown RBP22.94■■□□□ 1.26
TRIM60-201ENST00000341062 TOP2AP11388 1531 aaKnown RBP22.89■■□□□ 1.26
TRIM60-201ENST00000341062 HMGXB3Q12766 1538 aa22.89■■□□□ 1.25
TRIM60-201ENST00000341062 CCDC88BA6NC98 1476 aa22.71■■□□□ 1.23
TRIM60-201ENST00000341062 CHIC1Q5VXU3 224 aa22.67■■□□□ 1.22
TRIM60-201ENST00000341062 NESP48681 1621 aa22.48■■□□□ 1.19
TRIM60-201ENST00000341062 CADPSQ9ULU8 1353 aa22.35■■□□□ 1.17
TRIM60-201ENST00000341062 CFTRP13569 1480 aa22.34■■□□□ 1.17
TRIM60-201ENST00000341062 LAMC3Q9Y6N6 1575 aa22.26■■□□□ 1.15
TRIM60-201ENST00000341062 PRDM2Q13029 1718 aa22.22■■□□□ 1.15
TRIM60-201ENST00000341062 KIF21AQ7Z4S6 1674 aa22.18■■□□□ 1.14
TRIM60-201ENST00000341062 ABCC8Q09428 1581 aa22.14■■□□□ 1.13
TRIM60-201ENST00000341062 FANCD2Q9BXW9 1451 aa22.14■■□□□ 1.13
TRIM60-201ENST00000341062 PDS5BQ9NTI5 1447 aa22.06■■□□□ 1.12
TRIM60-201ENST00000341062 CEP164Q9UPV0 1460 aa22.01■■□□□ 1.11
TRIM60-201ENST00000341062 ERCC6Q03468 1493 aa22■■□□□ 1.11
TRIM60-201ENST00000341062 SYNJ1O43426 1573 aa21.96■■□□□ 1.11
TRIM60-201ENST00000341062 URB2Q14146 1524 aaKnown RBP21.96■■□□□ 1.11
TRIM60-201ENST00000341062 CUX1P39880 1505 aa21.95■■□□□ 1.1
TRIM60-201ENST00000341062 THOC2Q8NI27 1593 aaKnown RBP21.92■■□□□ 1.1
TRIM60-201ENST00000341062 WRNQ14191 1432 aaPredicted RBP eCLIP21.92■■□□□ 1.1
TRIM60-201ENST00000341062 MRC2Q9UBG0 1479 aa21.87■■□□□ 1.09
TRIM60-201ENST00000341062 TOPBP1Q92547 1522 aa21.86■■□□□ 1.09
TRIM60-201ENST00000341062 TRIM41Q8WV44 630 aa21.85■■□□□ 1.09
TRIM60-201ENST00000341062 DNMBPQ6XZF7 1577 aa21.83■■□□□ 1.09
TRIM60-201ENST00000341062 TOP2BQ02880 1626 aa21.82■■□□□ 1.08
TRIM60-201ENST00000341062 BIVM-ERCC5R4GMW8 1640 aa21.82■■□□□ 1.08
TRIM60-201ENST00000341062 LOC105371045A0A1W2PR82 267 aa21.81■■□□□ 1.08
TRIM60-201ENST00000341062 WDR62O43379 1518 aa21.8■■□□□ 1.08
TRIM60-201ENST00000341062 FGD5Q6ZNL6 1462 aa21.75■■□□□ 1.07
TRIM60-201ENST00000341062 POLA1P09884 1462 aaPredicted RBP21.73■■□□□ 1.07
TRIM60-201ENST00000341062 RAD54L2Q9Y4B4 1467 aa21.71■■□□□ 1.07
TRIM60-201ENST00000341062 CUX2O14529 1486 aa21.69■■□□□ 1.06
TRIM60-201ENST00000341062 TARBP1Q13395 1621 aaKnown RBP21.61■■□□□ 1.05
TRIM60-201ENST00000341062 SOGA1O94964 1423 aa21.61■■□□□ 1.05
TRIM60-201ENST00000341062 RUSC2Q8N2Y8 1516 aa21.6■■□□□ 1.05
TRIM60-201ENST00000341062 WDR97A6NE52 1622 aa21.56■■□□□ 1.04
TRIM60-201ENST00000341062 ZNF608Q9ULD9 1512 aaPredicted RBP21.56■■□□□ 1.04
TRIM60-201ENST00000341062 TDRD9Q8NDG6 1382 aaKnown RBP21.51■■□□□ 1.03
TRIM60-201ENST00000341062 PCGF6Q9BYE7 350 aa21.51■■□□□ 1.03
TRIM60-201ENST00000341062 FAM9AQ8IZU1 332 aaPredicted RBP21.5■■□□□ 1.03
TRIM60-201ENST00000341062 ABCA10Q8WWZ4 1543 aa21.5■■□□□ 1.03
TRIM60-201ENST00000341062 IFT140Q96RY7 1462 aa21.49■■□□□ 1.03
TRIM60-201ENST00000341062 AQRO60306 1485 aaKnown RBP eCLIP21.48■■□□□ 1.03
TRIM60-201ENST00000341062 HRCP23327 699 aa21.47■■□□□ 1.03
TRIM60-201ENST00000341062 ABCA5Q8WWZ7 1642 aa21.42■■□□□ 1.02
TRIM60-201ENST00000341062 EIF4G3O43432 1585 aaKnown RBP21.42■■□□□ 1.02
TRIM60-201ENST00000341062 TRIM26Q12899 539 aaPredicted RBP21.36■■□□□ 1.01
TRIM60-201ENST00000341062 KIF27Q86VH2 1401 aa21.36■■□□□ 1.01
TRIM60-201ENST00000341062 GAPVD1Q14C86 1478 aa21.35■■□□□ 1.01
TRIM60-201ENST00000341062 PBRM1Q86U86 1689 aa21.34■■□□□ 1.01
TRIM60-201ENST00000341062 EHMT2Q96KQ7 1210 aa21.31■■□□□ 1
TRIM60-201ENST00000341062 IGF1RP08069 1367 aa21.31■■□□□ 1
TRIM60-201ENST00000341062 EEA1Q15075 1411 aa21.26■□□□□ 0.99
TRIM60-201ENST00000341062 CSRNP3Q8WYN3 585 aa21.25■□□□□ 0.99
TRIM60-201ENST00000341062 GRIN2BQ13224 1484 aa21.24■□□□□ 0.99
TRIM60-201ENST00000341062 SNAPC4Q5SXM2 1469 aa21.23■□□□□ 0.99
TRIM60-201ENST00000341062 ERICH3Q5RHP9 1530 aa21.21■□□□□ 0.99
TRIM60-201ENST00000341062 ADAMTS12P58397 1594 aa21.17■□□□□ 0.98
TRIM60-201ENST00000341062 PRXQ9BXM0 1461 aa21.15■□□□□ 0.98
TRIM60-201ENST00000341062 RAPGEF2Q9Y4G8 1499 aa21.15■□□□□ 0.98
TRIM60-201ENST00000341062 CARMIL1Q5VZK9 1371 aa21.15■□□□□ 0.98
TRIM60-201ENST00000341062 CUL7Q14999 1698 aa21.12■□□□□ 0.97
TRIM60-201ENST00000341062 MAGI1Q96QZ7 1491 aaPredicted RBP21.1■□□□□ 0.97
TRIM60-201ENST00000341062 CHD1O14646 1710 aa21.09■□□□□ 0.97
TRIM60-201ENST00000341062 FHAD1B1AJZ9 1412 aa21.08■□□□□ 0.97
TRIM60-201ENST00000341062 FBLN2P98095 1184 aa21.08■□□□□ 0.97
TRIM60-201ENST00000341062 KIF21BO75037 1637 aa21.07■□□□□ 0.96
TRIM60-201ENST00000341062 TNIKQ9UKE5 1360 aa21.05■□□□□ 0.96
TRIM60-201ENST00000341062 SYNJ2O15056 1496 aa21.05■□□□□ 0.96
TRIM60-201ENST00000341062 GRIN2AQ12879 1464 aa21.01■□□□□ 0.95
TRIM60-201ENST00000341062 CHMP7Q8WUX9 453 aaPredicted RBP21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms