RNA–Protein interactions for RNA: ENST00000436629.2

PNMA6F-201, Transcript of PNMA family member 6F, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PNMA6F, Length 3,348 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA6F-201ENST00000436629 NISCHQ9Y2I1 1504 aa23.73■■□□□ 1.39
PNMA6F-201ENST00000436629 SHROOM4Q9ULL8 1493 aa20.93■□□□□ 0.94
PNMA6F-201ENST00000436629 SUPT5HO00267 1087 aaKnown RBP20.69■□□□□ 0.9
PNMA6F-201ENST00000436629 DCAF8L2P0C7V8 631 aa20.68■□□□□ 0.9
PNMA6F-201ENST00000436629 CCDC180Q9P1Z9 1646 aa20.12■□□□□ 0.81
PNMA6F-201ENST00000436629 ZCCHC6Q5VYS8 1495 aaKnown RBP20.02■□□□□ 0.79
PNMA6F-201ENST00000436629 EHMT2Q96KQ7 1210 aa19.78■□□□□ 0.76
PNMA6F-201ENST00000436629 PCGF6Q9BYE7 350 aa19.66■□□□□ 0.74
PNMA6F-201ENST00000436629 HRCP23327 699 aa19.59■□□□□ 0.73
PNMA6F-201ENST00000436629 PPARGC1BQ86YN6 1023 aaKnown RBP19.58■□□□□ 0.72
PNMA6F-201ENST00000436629 LOC105371045A0A1W2PR82 267 aa19.47■□□□□ 0.71
PNMA6F-201ENST00000436629 CHIC1Q5VXU3 224 aa19.45■□□□□ 0.7
PNMA6F-201ENST00000436629 MYO15BQ96JP2 1530 aa19.43■□□□□ 0.7
PNMA6F-201ENST00000436629 DCAF1Q9Y4B6 1507 aa19.4■□□□□ 0.7
PNMA6F-201ENST00000436629 FAM9AQ8IZU1 332 aaPredicted RBP19.38■□□□□ 0.69
PNMA6F-201ENST00000436629 SCRIBQ14160 1630 aa19.06■□□□□ 0.64
PNMA6F-201ENST00000436629 TTBK1Q5TCY1 1321 aaPredicted RBP19.05■□□□□ 0.64
PNMA6F-201ENST00000436629 PELP1Q8IZL8 1130 aaKnown RBP19.01■□□□□ 0.63
PNMA6F-201ENST00000436629 ABCC9O60706 1549 aa19■□□□□ 0.63
PNMA6F-201ENST00000436629 TRIM41Q8WV44 630 aa18.84■□□□□ 0.61
PNMA6F-201ENST00000436629 RSF1Q96T23 1441 aaPredicted RBP18.82■□□□□ 0.6
PNMA6F-201ENST00000436629 SCAF1Q9H7N4 1312 aaKnown RBP18.79■□□□□ 0.6
PNMA6F-201ENST00000436629 TRIM26Q12899 539 aaPredicted RBP18.76■□□□□ 0.59
PNMA6F-201ENST00000436629 CECR2Q9BXF3 1484 aa18.67■□□□□ 0.58
PNMA6F-201ENST00000436629 RB1CC1Q8TDY2 1594 aa18.65■□□□□ 0.58
PNMA6F-201ENST00000436629 NACADO15069 1562 aa18.6■□□□□ 0.57
PNMA6F-201ENST00000436629 MROH2BQ7Z745 1585 aa18.54■□□□□ 0.56
PNMA6F-201ENST00000436629 RANGAP1P46060 587 aaPredicted RBP18.51■□□□□ 0.55
PNMA6F-201ENST00000436629 WIZO95785 1651 aa18.45■□□□□ 0.54
PNMA6F-201ENST00000436629 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.44■□□□□ 0.54
PNMA6F-201ENST00000436629 ZEB1P37275 1124 aaPredicted RBP18.43■□□□□ 0.54
PNMA6F-201ENST00000436629 CCER1Q8TC90 406 aaPredicted RBP18.33■□□□□ 0.52
PNMA6F-201ENST00000436629 PABPN1Q86U42 306 aaKnown RBP eCLIP18.28■□□□□ 0.52
PNMA6F-201ENST00000436629 NEUROD1Q13562 356 aa18.23■□□□□ 0.51
PNMA6F-201ENST00000436629 GTF3C3Q9Y5Q9 886 aa18.23■□□□□ 0.51
PNMA6F-201ENST00000436629 MYT1Q01538 1121 aa18.23■□□□□ 0.51
PNMA6F-201ENST00000436629 BAZ1AQ9NRL2 1556 aaPredicted RBP18.19■□□□□ 0.5
PNMA6F-201ENST00000436629 UBTFP17480 764 aaKnown RBP18.18■□□□□ 0.5
PNMA6F-201ENST00000436629 UNC13AQ9UPW8 1703 aa18.15■□□□□ 0.5
PNMA6F-201ENST00000436629 ACIN1Q9UKV3 1341 aaKnown RBP18.14■□□□□ 0.49
PNMA6F-201ENST00000436629 YTHDC1Q96MU7 727 aaKnown RBP18.13■□□□□ 0.49
PNMA6F-201ENST00000436629 EIF4G1Q04637 1599 aaKnown RBP18.09■□□□□ 0.49
PNMA6F-201ENST00000436629 ABCC8Q09428 1581 aa18.08■□□□□ 0.49
PNMA6F-201ENST00000436629 SMARCA4P51532 1647 aa18.08■□□□□ 0.48
PNMA6F-201ENST00000436629 CCDC88BA6NC98 1476 aa18.06■□□□□ 0.48
PNMA6F-201ENST00000436629 HNRNPUL2Q1KMD3 747 aaKnown RBP18.03■□□□□ 0.48
PNMA6F-201ENST00000436629 TOP2AP11388 1531 aaKnown RBP18.02■□□□□ 0.47
PNMA6F-201ENST00000436629 SMARCA2P51531 1590 aa17.97■□□□□ 0.47
PNMA6F-201ENST00000436629 CENPBP07199 599 aaPredicted RBP17.94■□□□□ 0.46
PNMA6F-201ENST00000436629 BICRAQ9NZM4 1560 aa17.93■□□□□ 0.46
PNMA6F-201ENST00000436629 DIEXFQ68CQ4 756 aaKnown RBP17.93■□□□□ 0.46
PNMA6F-201ENST00000436629 SOGA1O94964 1423 aa17.9■□□□□ 0.46
PNMA6F-201ENST00000436629 RUSC2Q8N2Y8 1516 aa17.85■□□□□ 0.45
PNMA6F-201ENST00000436629 ITGAEP38570 1179 aa17.76■□□□□ 0.43
PNMA6F-201ENST00000436629 CSRNP3Q8WYN3 585 aa17.75■□□□□ 0.43
PNMA6F-201ENST00000436629 APLP2Q06481 763 aa17.73■□□□□ 0.43
PNMA6F-201ENST00000436629 CEP162Q5TB80 1403 aa17.71■□□□□ 0.43
PNMA6F-201ENST00000436629 PEG3Q9GZU2 1588 aa17.69■□□□□ 0.42
PNMA6F-201ENST00000436629 WRNQ14191 1432 aaPredicted RBP eCLIP17.68■□□□□ 0.42
PNMA6F-201ENST00000436629 ATAD2BQ9ULI0 1458 aa17.67■□□□□ 0.42
PNMA6F-201ENST00000436629 BAZ1BQ9UIG0 1483 aaKnown RBP17.64■□□□□ 0.41
PNMA6F-201ENST00000436629 SYNJ1O43426 1573 aa17.61■□□□□ 0.41
PNMA6F-201ENST00000436629 ATP1B4Q9UN42 357 aaPredicted RBP17.6■□□□□ 0.41
PNMA6F-201ENST00000436629 TNIKQ9UKE5 1360 aa17.6■□□□□ 0.41
PNMA6F-201ENST00000436629 ZNF316A6NFI3 1004 aaPredicted RBP17.58■□□□□ 0.41
PNMA6F-201ENST00000436629 EEA1Q15075 1411 aa17.52■□□□□ 0.4
PNMA6F-201ENST00000436629 GOLGA3Q08378 1498 aa17.52■□□□□ 0.4
PNMA6F-201ENST00000436629 MIER1Q8N108 512 aa17.52■□□□□ 0.4
PNMA6F-201ENST00000436629 BCL11AQ9H165 835 aa17.51■□□□□ 0.39
PNMA6F-201ENST00000436629 RAPGEF2Q9Y4G8 1499 aa17.43■□□□□ 0.38
PNMA6F-201ENST00000436629 CEP164Q9UPV0 1460 aa17.41■□□□□ 0.38
PNMA6F-201ENST00000436629 CLIP1P30622 1438 aa17.4■□□□□ 0.38
PNMA6F-201ENST00000436629 P3H3Q8IVL6 736 aa17.36■□□□□ 0.37
PNMA6F-201ENST00000436629 KIF21BO75037 1637 aa17.32■□□□□ 0.36
PNMA6F-201ENST00000436629 TOP2BQ02880 1626 aa17.29■□□□□ 0.36
PNMA6F-201ENST00000436629 HIRIP3Q9BW71 556 aaPredicted RBP17.29■□□□□ 0.36
PNMA6F-201ENST00000436629 NCAPD3P42695 1498 aa17.27■□□□□ 0.36
PNMA6F-201ENST00000436629 BCANQ96GW7 911 aa17.26■□□□□ 0.35
PNMA6F-201ENST00000436629 VPS8Q8N3P4 1428 aa17.25■□□□□ 0.35
PNMA6F-201ENST00000436629 CUX1P39880 1505 aa17.24■□□□□ 0.35
PNMA6F-201ENST00000436629 ANP32EQ9BTT0 268 aa17.23■□□□□ 0.35
PNMA6F-201ENST00000436629 KANK4Q5T7N3 995 aaPredicted RBP17.21■□□□□ 0.34
PNMA6F-201ENST00000436629 HMGXB3Q12766 1538 aa17.2■□□□□ 0.34
PNMA6F-201ENST00000436629 BIVM-ERCC5R4GMW8 1640 aa17.19■□□□□ 0.34
PNMA6F-201ENST00000436629 CNGB1Q14028 1251 aaPredicted RBP17.18■□□□□ 0.34
PNMA6F-201ENST00000436629 FAM50AQ14320 339 aaKnown RBP17.18■□□□□ 0.34
PNMA6F-201ENST00000436629 CFTRP13569 1480 aa17.15■□□□□ 0.34
PNMA6F-201ENST00000436629 PRXQ9BXM0 1461 aa17.14■□□□□ 0.33
PNMA6F-201ENST00000436629 SUPT16HQ9Y5B9 1047 aaKnown RBP17.11■□□□□ 0.33
PNMA6F-201ENST00000436629 KIF27Q86VH2 1401 aa17.11■□□□□ 0.33
PNMA6F-201ENST00000436629 ARID3CA6NKF2 412 aa17.11■□□□□ 0.33
PNMA6F-201ENST00000436629 TSHZ2Q9NRE2 1034 aa17.1■□□□□ 0.33
PNMA6F-201ENST00000436629 KCNH8Q96L42 1107 aa17.09■□□□□ 0.33
PNMA6F-201ENST00000436629 ARAP1Q96P48 1450 aa17.09■□□□□ 0.33
PNMA6F-201ENST00000436629 CUX2O14529 1486 aa17.05■□□□□ 0.32
PNMA6F-201ENST00000436629 ERICH3Q5RHP9 1530 aa17.04■□□□□ 0.32
PNMA6F-201ENST00000436629 CADPSQ9ULU8 1353 aa17.02■□□□□ 0.32
PNMA6F-201ENST00000436629 DDX10Q13206 875 aaKnown RBP17.02■□□□□ 0.31
PNMA6F-201ENST00000436629 SIN3AQ96ST3 1273 aa17.02■□□□□ 0.31
PNMA6F-201ENST00000436629 PRDM2Q13029 1718 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms