RNA–Protein interactions for RNA: ENST00000252211.6

ZKSCAN3-201, Transcript of zinc finger with KRAB and SCAN domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZKSCAN3, Length 4,725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3-201ENST00000252211 DCAF8L2P0C7V8 631 aa22.13■■□□□ 1.13
ZKSCAN3-201ENST00000252211 NISCHQ9Y2I1 1504 aa21.94■■□□□ 1.1
ZKSCAN3-201ENST00000252211 SUPT5HO00267 1087 aaKnown RBP20.6■□□□□ 0.89
ZKSCAN3-201ENST00000252211 SHROOM4Q9ULL8 1493 aa20.48■□□□□ 0.87
ZKSCAN3-201ENST00000252211 EHMT2Q96KQ7 1210 aa19.67■□□□□ 0.74
ZKSCAN3-201ENST00000252211 FAM9AQ8IZU1 332 aaPredicted RBP19.43■□□□□ 0.7
ZKSCAN3-201ENST00000252211 APLP2Q06481 763 aa19.42■□□□□ 0.7
ZKSCAN3-201ENST00000252211 TRIM41Q8WV44 630 aa19.19■□□□□ 0.66
ZKSCAN3-201ENST00000252211 ABCC9O60706 1549 aa19.13■□□□□ 0.65
ZKSCAN3-201ENST00000252211 RANGAP1P46060 587 aaPredicted RBP19.04■□□□□ 0.64
ZKSCAN3-201ENST00000252211 UBTFP17480 764 aaKnown RBP18.93■□□□□ 0.62
ZKSCAN3-201ENST00000252211 ATP1B4Q9UN42 357 aaPredicted RBP18.92■□□□□ 0.62
ZKSCAN3-201ENST00000252211 TTBK1Q5TCY1 1321 aaPredicted RBP18.91■□□□□ 0.62
ZKSCAN3-201ENST00000252211 PABPN1Q86U42 306 aaKnown RBP eCLIP18.85■□□□□ 0.61
ZKSCAN3-201ENST00000252211 PCGF6Q9BYE7 350 aa18.58■□□□□ 0.56
ZKSCAN3-201ENST00000252211 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.45■□□□□ 0.54
ZKSCAN3-201ENST00000252211 HNRNPUL2Q1KMD3 747 aaKnown RBP18.45■□□□□ 0.54
ZKSCAN3-201ENST00000252211 CCER1Q8TC90 406 aaPredicted RBP18.38■□□□□ 0.53
ZKSCAN3-201ENST00000252211 CHIC1Q5VXU3 224 aa18.34■□□□□ 0.53
ZKSCAN3-201ENST00000252211 MYT1LQ9UL68 1186 aa18.31■□□□□ 0.52
ZKSCAN3-201ENST00000252211 PPARGC1BQ86YN6 1023 aaKnown RBP18.26■□□□□ 0.51
ZKSCAN3-201ENST00000252211 ZEB1P37275 1124 aaPredicted RBP18.25■□□□□ 0.51
ZKSCAN3-201ENST00000252211 PELP1Q8IZL8 1130 aaKnown RBP18.18■□□□□ 0.5
ZKSCAN3-201ENST00000252211 CCDC180Q9P1Z9 1646 aa18.17■□□□□ 0.5
ZKSCAN3-201ENST00000252211 LOC105371045A0A1W2PR82 267 aa18.16■□□□□ 0.5
ZKSCAN3-201ENST00000252211 SCRIBQ14160 1630 aa18.15■□□□□ 0.5
ZKSCAN3-201ENST00000252211 ITGAEP38570 1179 aa18.13■□□□□ 0.49
ZKSCAN3-201ENST00000252211 ZCCHC6Q5VYS8 1495 aaKnown RBP18.13■□□□□ 0.49
ZKSCAN3-201ENST00000252211 FBLN2P98095 1184 aa18.09■□□□□ 0.49
ZKSCAN3-201ENST00000252211 TRIM26Q12899 539 aaPredicted RBP18.02■□□□□ 0.48
ZKSCAN3-201ENST00000252211 RB1CC1Q8TDY2 1594 aa17.93■□□□□ 0.46
ZKSCAN3-201ENST00000252211 FAM50AQ14320 339 aaKnown RBP17.81■□□□□ 0.44
ZKSCAN3-201ENST00000252211 CENPBP07199 599 aaPredicted RBP17.81■□□□□ 0.44
ZKSCAN3-201ENST00000252211 CSRNP3Q8WYN3 585 aa17.79■□□□□ 0.44
ZKSCAN3-201ENST00000252211 NACADO15069 1562 aa17.76■□□□□ 0.43
ZKSCAN3-201ENST00000252211 POLR3GLQ9BT43 218 aa17.73■□□□□ 0.43
ZKSCAN3-201ENST00000252211 P3H3Q8IVL6 736 aa17.69■□□□□ 0.42
ZKSCAN3-201ENST00000252211 TRIM52Q96A61 297 aa17.66■□□□□ 0.42
ZKSCAN3-201ENST00000252211 ARID3CA6NKF2 412 aa17.62■□□□□ 0.41
ZKSCAN3-201ENST00000252211 CDK11AQ9UQ88 783 aaPredicted RBP17.61■□□□□ 0.41
ZKSCAN3-201ENST00000252211 NEFLP07196 543 aa17.57■□□□□ 0.4
ZKSCAN3-201ENST00000252211 NPM1P06748 294 aaKnown RBP eCLIP17.55■□□□□ 0.4
ZKSCAN3-201ENST00000252211 YTHDC1Q96MU7 727 aaKnown RBP17.53■□□□□ 0.4
ZKSCAN3-201ENST00000252211 SLC4A1APQ9BWU0 796 aaKnown RBP17.52■□□□□ 0.4
ZKSCAN3-201ENST00000252211 CHMP7Q8WUX9 453 aaPredicted RBP17.47■□□□□ 0.39
ZKSCAN3-201ENST00000252211 ZNF777Q9ULD5 760 aaPredicted RBP17.47■□□□□ 0.39
ZKSCAN3-201ENST00000252211 CNGB1Q14028 1251 aaPredicted RBP17.46■□□□□ 0.39
ZKSCAN3-201ENST00000252211 BAZ1BQ9UIG0 1483 aaKnown RBP17.45■□□□□ 0.38
ZKSCAN3-201ENST00000252211 HRCP23327 699 aa17.45■□□□□ 0.38
ZKSCAN3-201ENST00000252211 RSF1Q96T23 1441 aaPredicted RBP17.44■□□□□ 0.38
ZKSCAN3-201ENST00000252211 NEUROD1Q13562 356 aa17.41■□□□□ 0.38
ZKSCAN3-201ENST00000252211 DCAF1Q9Y4B6 1507 aa17.41■□□□□ 0.38
ZKSCAN3-201ENST00000252211 ZNF326Q5BKZ1 582 aaKnown RBP17.36■□□□□ 0.37
ZKSCAN3-201ENST00000252211 ESF1Q9H501 851 aaKnown RBP17.36■□□□□ 0.37
ZKSCAN3-201ENST00000252211 MYT1Q01538 1121 aa17.3■□□□□ 0.36
ZKSCAN3-201ENST00000252211 BCANQ96GW7 911 aa17.3■□□□□ 0.36
ZKSCAN3-201ENST00000252211 BAZ1AQ9NRL2 1556 aaPredicted RBP17.29■□□□□ 0.36
ZKSCAN3-201ENST00000252211 ERICH6Q7L0X2 663 aa17.28■□□□□ 0.36
ZKSCAN3-201ENST00000252211 ERCC6Q03468 1493 aa17.27■□□□□ 0.36
ZKSCAN3-201ENST00000252211 WRNQ14191 1432 aaPredicted RBP eCLIP17.22■□□□□ 0.35
ZKSCAN3-201ENST00000252211 CECR2Q9BXF3 1484 aa17.2■□□□□ 0.34
ZKSCAN3-201ENST00000252211 EEA1Q15075 1411 aa17.15■□□□□ 0.34
ZKSCAN3-201ENST00000252211 MTUS2Q5JR59 1369 aa17.15■□□□□ 0.34
ZKSCAN3-201ENST00000252211 TSPY4P0CV99 314 aa17.15■□□□□ 0.34
ZKSCAN3-201ENST00000252211 TSPY10P0CW01 314 aa17.15■□□□□ 0.34
ZKSCAN3-201ENST00000252211 STAG3Q9UJ98 1225 aa17.15■□□□□ 0.34
ZKSCAN3-201ENST00000252211 KIF27Q86VH2 1401 aa17.13■□□□□ 0.33
ZKSCAN3-201ENST00000252211 CHGAP10645 457 aaKnown RBP17.11■□□□□ 0.33
ZKSCAN3-201ENST00000252211 DIEXFQ68CQ4 756 aaKnown RBP17.1■□□□□ 0.33
ZKSCAN3-201ENST00000252211 PLPPR3Q6T4P5 718 aa17.1■□□□□ 0.33
ZKSCAN3-201ENST00000252211 CLIP1P30622 1438 aa17.1■□□□□ 0.33
ZKSCAN3-201ENST00000252211 PLEKHD1A6NEE1 506 aa17.09■□□□□ 0.33
ZKSCAN3-201ENST00000252211 KCNH8Q96L42 1107 aa17.07■□□□□ 0.32
ZKSCAN3-201ENST00000252211 CHIC2Q9UKJ5 165 aa17.07■□□□□ 0.32
ZKSCAN3-201ENST00000252211 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.04■□□□□ 0.32
ZKSCAN3-201ENST00000252211 MYO15BQ96JP2 1530 aa17.03■□□□□ 0.32
ZKSCAN3-201ENST00000252211 ANP32CO43423 234 aa17.02■□□□□ 0.31
ZKSCAN3-201ENST00000252211 GOLGA3Q08378 1498 aa17.01■□□□□ 0.31
ZKSCAN3-201ENST00000252211 SMARCA2P51531 1590 aa17■□□□□ 0.31
ZKSCAN3-201ENST00000252211 PDS5BQ9NTI5 1447 aa16.99■□□□□ 0.31
ZKSCAN3-201ENST00000252211 TONSLQ96HA7 1378 aa16.97■□□□□ 0.31
ZKSCAN3-201ENST00000252211 NEFMP07197 916 aa16.95■□□□□ 0.3
ZKSCAN3-201ENST00000252211 MROH2BQ7Z745 1585 aa16.95■□□□□ 0.3
ZKSCAN3-201ENST00000252211 DAXXQ9UER7 740 aaPredicted RBP16.92■□□□□ 0.3
ZKSCAN3-201ENST00000252211 CEP164Q9UPV0 1460 aa16.91■□□□□ 0.3
ZKSCAN3-201ENST00000252211 CUX2O14529 1486 aa16.89■□□□□ 0.3
ZKSCAN3-201ENST00000252211 ZNF316A6NFI3 1004 aaPredicted RBP16.89■□□□□ 0.29
ZKSCAN3-201ENST00000252211 CEP162Q5TB80 1403 aa16.88■□□□□ 0.29
ZKSCAN3-201ENST00000252211 CFDP1Q9UEE9 299 aaPredicted RBP16.88■□□□□ 0.29
ZKSCAN3-201ENST00000252211 CARMIL1Q5VZK9 1371 aa16.87■□□□□ 0.29
ZKSCAN3-201ENST00000252211 SLC24A1O60721 1099 aa16.87■□□□□ 0.29
ZKSCAN3-201ENST00000252211 CCDC88BA6NC98 1476 aa16.86■□□□□ 0.29
ZKSCAN3-201ENST00000252211 TNIKQ9UKE5 1360 aa16.84■□□□□ 0.29
ZKSCAN3-201ENST00000252211 CLSPNQ9HAW4 1339 aa16.84■□□□□ 0.29
ZKSCAN3-201ENST00000252211 RRP7BPQ9NSQ0 103 aa16.83■□□□□ 0.28
ZKSCAN3-201ENST00000252211 CADPSQ9ULU8 1353 aa16.81■□□□□ 0.28
ZKSCAN3-201ENST00000252211 ARID4BQ4LE39 1312 aaPredicted RBP16.81■□□□□ 0.28
ZKSCAN3-201ENST00000252211 SOGA1O94964 1423 aa16.78■□□□□ 0.28
ZKSCAN3-201ENST00000252211 ACIN1Q9UKV3 1341 aaKnown RBP16.77■□□□□ 0.28
ZKSCAN3-201ENST00000252211 KDM2AQ9Y2K7 1162 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms