Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
NKX2-5P52952 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
NKX2-5P52952 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC12.41□□□□□ -0.42
NKX2-5P52952 RGL1-202ENST00000360851 4724 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
NKX2-5P52952 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC12.41□□□□□ -0.42
NKX2-5P52952 AC023355.1-202ENST00000612262 4242 ntTSL 5 BASIC12.41□□□□□ -0.42
NKX2-5P52952 AC096564.1-201ENST00000499098 2810 ntTSL 2 BASIC12.41□□□□□ -0.42
NKX2-5P52952 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC12.41□□□□□ -0.42
NKX2-5P52952 ANKDD1A-201ENST00000319580 3110 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
NKX2-5P52952 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NKX2-5P52952 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NKX2-5P52952 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC12.41□□□□□ -0.42
NKX2-5P52952 RPS8P6-201ENST00000426177 609 ntBASIC12.41□□□□□ -0.42
NKX2-5P52952 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NKX2-5P52952 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC12.41□□□□□ -0.42
NKX2-5P52952 VENTXP7-201ENST00000475503 772 ntBASIC12.41□□□□□ -0.42
NKX2-5P52952 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
NKX2-5P52952 COQ9-214ENST00000567933 882 ntTSL 3 BASIC12.41□□□□□ -0.42
NKX2-5P52952 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC12.41□□□□□ -0.42
NKX2-5P52952 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
NKX2-5P52952 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC12.41□□□□□ -0.42
NKX2-5P52952 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.41□□□□□ -0.42
NKX2-5P52952 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
NKX2-5P52952 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
NKX2-5P52952 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NKX2-5P52952 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
NKX2-5P52952 FUT8-204ENST00000394586 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NKX2-5P52952 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC12.41□□□□□ -0.42
NKX2-5P52952 PRKCQ-201ENST00000263125 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NKX2-5P52952 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NKX2-5P52952 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
NKX2-5P52952 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC12.41□□□□□ -0.42
NKX2-5P52952 AC008158.1-201ENST00000578759 3668 ntBASIC12.41□□□□□ -0.42
NKX2-5P52952 CICP19-201ENST00000632944 2357 ntBASIC12.41□□□□□ -0.42
NKX2-5P52952 RBFOX1-208ENST00000547372 3524 ntTSL 5 BASIC12.41□□□□□ -0.42
NKX2-5P52952 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
NKX2-5P52952 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
NKX2-5P52952 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.41□□□□□ -0.42
NKX2-5P52952 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NKX2-5P52952 AIF1L-206ENST00000372302 3340 ntTSL 2 BASIC12.4□□□□□ -0.42
NKX2-5P52952 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NKX2-5P52952 SLC35A4-201ENST00000323146 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NKX2-5P52952 PM20D1-201ENST00000367136 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NKX2-5P52952 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
NKX2-5P52952 FHOD1-201ENST00000258201 3990 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NKX2-5P52952 HTR2C-203ENST00000371951 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NKX2-5P52952 FAS-204ENST00000355740 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
NKX2-5P52952 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
NKX2-5P52952 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.4□□□□□ -0.42
NKX2-5P52952 RPS24-204ENST00000440692 2814 ntTSL 3 BASIC12.4□□□□□ -0.42
NKX2-5P52952 AL357054.4-201ENST00000606285 2814 ntBASIC12.4□□□□□ -0.42
NKX2-5P52952 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
NKX2-5P52952 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
NKX2-5P52952 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
NKX2-5P52952 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NKX2-5P52952 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NKX2-5P52952 SOX13-203ENST00000367204 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NKX2-5P52952 PLEKHG5-205ENST00000377740 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
NKX2-5P52952 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NKX2-5P52952 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NKX2-5P52952 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NKX2-5P52952 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
NKX2-5P52952 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
NKX2-5P52952 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
NKX2-5P52952 AC104457.1-201ENST00000401024 814 ntBASIC12.4□□□□□ -0.42
NKX2-5P52952 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC12.4□□□□□ -0.42
NKX2-5P52952 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NKX2-5P52952 AC136604.1-201ENST00000418535 575 ntBASIC12.4□□□□□ -0.42
NKX2-5P52952 DUSP5P1-201ENST00000441325 1139 ntBASIC12.4□□□□□ -0.42
NKX2-5P52952 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
NKX2-5P52952 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC12.4□□□□□ -0.42
NKX2-5P52952 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC12.4□□□□□ -0.42
NKX2-5P52952 TMA16-209ENST00000513272 803 ntTSL 2 BASIC12.4□□□□□ -0.42
NKX2-5P52952 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NKX2-5P52952 BNIP3P18-201ENST00000593976 575 ntBASIC12.4□□□□□ -0.42
NKX2-5P52952 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC12.4□□□□□ -0.42
NKX2-5P52952 AL589182.2-201ENST00000619332 1049 ntBASIC12.4□□□□□ -0.42
NKX2-5P52952 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC12.4□□□□□ -0.42
NKX2-5P52952 BTNL8-202ENST00000340184 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NKX2-5P52952 CIZ1-205ENST00000372948 2858 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
NKX2-5P52952 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC12.4□□□□□ -0.42
NKX2-5P52952 GUCY2EP-203ENST00000531117 1918 ntBASIC12.4□□□□□ -0.42
NKX2-5P52952 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC12.4□□□□□ -0.42
NKX2-5P52952 CSNK1G1-209ENST00000634811 2592 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
NKX2-5P52952 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC12.4□□□□□ -0.42
NKX2-5P52952 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
NKX2-5P52952 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
NKX2-5P52952 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC12.4□□□□□ -0.42
NKX2-5P52952 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NKX2-5P52952 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.4□□□□□ -0.42
NKX2-5P52952 ATP13A2-201ENST00000326735 3840 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
NKX2-5P52952 GPR55-205ENST00000622008 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NKX2-5P52952 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NKX2-5P52952 DNMT3A-202ENST00000321117 4279 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
NKX2-5P52952 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC12.39□□□□□ -0.43
NKX2-5P52952 OS9-203ENST00000389142 2457 ntTSL 5 BASIC12.39□□□□□ -0.43
NKX2-5P52952 SHC1-210ENST00000448116 3481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-5P52952 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
NKX2-5P52952 CEP63-215ENST00000606977 2800 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
NKX2-5P52952 EHD1-201ENST00000320631 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms